Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401020957 Solanum tuberosum HOM05D004165 ORTHO05D005063 1.4e-72 276.2 134 100.0
Solyc04g051570.4 Solanum lycopersicum HOM05D004165 ORTHO05D005063 3.0e-56 221.9 117 93.2
Sopen04g022920 Solanum pennellii HOM05D004165 ORTHO05D005063 3.0e-56 221.9 117 93.2
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 5.4e-53 211.1 117 88.9
Nitab4.5_0009050g0010 Nicotiana tabacum HOM05D004165 ORTHO05D005063 5.4e-53 211.1 117 88.9
Peaxi162Scf00702g00611 Petunia axillaris HOM05D004165 ORTHO05D005063 2.8e-46 188.7 117 82.1
PGSC0003DMG400026832 Solanum tuberosum HOM05D004165 ORTHO05D005063 2.3e-40 169.1 83 98.8
Lj4C863G6 Lonicera japonica HOM05D004165 ORTHO05D005063 1.8e-32 142.9 113 58.4
Cc07_g16560 Coffea canephora HOM05D004165 ORTHO05D005063 4.0e-32 141.7 111 58.6
Dinv21242 Davidia involucrata HOM05D004165 ORTHO05D005063 2.6e-31 139.0 111 58.6
Cfa002775 Carpinus fangiana HOM05D004165 ORTHO05D005063 6.4e-30 134.4 111 55.9
Haze_25068 Corylus avellana HOM05D004165 ORTHO05D005063 6.4e-30 134.4 111 55.9
QL06p031619 Quercus lobata HOM05D004165 ORTHO05D005063 3.2e-29 132.1 111 55.9
SalBow6G1439 Salvia bowleyana HOM05D004165 ORTHO05D005063 4.1e-29 131.7 111 55.9
MSTRG.23305 Avicennia marina HOM05D004165 ORTHO05D005063 7.0e-29 131.0 111 56.8
Oeu054941.1 Olea europaea HOM05D004165 ORTHO05D005063 2.0e-28 129.4 111 57.7
CiPaw.03G132500 Carya illinoinensis HOM05D004165 ORTHO05D005063 4.6e-28 128.3 111 55.0
Ciclev10024679m.g Citrus clementina HOM05D004165 ORTHO05D005063 4.6e-28 128.3 111 55.0
MBI01_g36155_MAGBIO Magnolia biondii HOM05D004165 ORTHO05D005063 7.8e-28 127.5 111 55.9
SGA_v2.0_scaffold2G01283 Striga asiatica HOM05D004165 ORTHO05D005063 1.3e-27 126.7 111 55.9
FvH4_1g23050 Fragaria vesca HOM05D004165 ORTHO05D005063 1.7e-27 126.3 113 52.2
TAR628G1404 Trochodendron aralioides HOM05D004165 ORTHO05D005063 3.0e-27 125.6 111 55.9
Prupe.6G168600 Prunus persica HOM05D004165 ORTHO05D005063 3.9e-27 125.2 111 55.9
FAN23G0468 Fragaria x ananassa HOM05D004165 ORTHO05D005063 6.6e-27 124.4 113 51.3
RcHm_v2.0_Chr2g0117761 Rosa chinensis HOM05D004165 ORTHO05D005063 6.6e-27 124.4 113 51.3
FAN26G2965 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.1e-26 123.6 113 51.3
MD15G1330600 Malus domestica HOM05D004165 ORTHO05D005063 1.1e-26 123.6 111 54.1
FAN28G2110 Fragaria x ananassa HOM05D004165 ORTHO05D005063 2.5e-26 122.5 113 50.4
AUR62017931 Chenopodium quinoa HOM05D004165 ORTHO05D005063 3.3e-26 122.1 111 52.3
FAN19G2841 Fragaria x ananassa HOM05D004165 ORTHO05D005063 7.3e-26 120.9 113 49.6
Atru.chr4.460 Acer truncatum HOM05D004165 ORTHO05D005063 9.5e-26 120.6 111 53.2
AUR62003622 Chenopodium quinoa HOM05D004165 ORTHO05D005063 9.5e-26 120.6 111 51.4
Migut.H02450 Erythranthe guttata HOM05D004165 ORTHO05D005063 1.6e-25 119.8 111 58.6
GSVIVG01022256001 Vitis vinifera HOM05D004165 ORTHO05D005063 1.6e-25 119.8 109 52.3
Gohir.D12G093100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 2.8e-25 119.0 111 53.2
Gorai.008G100800 Gossypium raimondii HOM05D004165 ORTHO05D005063 2.8e-25 119.0 111 53.2
Aqoxy5G02023 Aquilegia oxysepala HOM05D004165 ORTHO05D005063 1.1e-24 117.1 114 46.5
DCAR_016674 Daucus carota HOM05D004165 ORTHO05D005063 1.4e-24 116.7 111 45.0
Nn5g28841 Nelumbo nucifera HOM05D004165 ORTHO05D005063 2.3e-24 115.9 111 52.3
Gohir.A12G083100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 3.1e-24 115.5 111 51.4
COL.COLO4_22364 Corchorus olitorius HOM05D004165 ORTHO05D005063 8.9e-24 114.0 111 51.4
Manes.12G144600 Manihot esculenta HOM05D004165 ORTHO05D005063 8.9e-24 114.0 111 50.5
ECA233G2130 Erigeron canadensis HOM05D004165 ORTHO05D005063 1.2e-23 113.6 109 50.5
Sabra05G0071000 Salix brachista HOM05D004165 ORTHO05D005063 1.2e-23 113.6 112 50.9
Potri.007G078650 Populus trichocarpa HOM05D004165 ORTHO05D005063 2.0e-23 112.8 111 49.5
Thecc.01G115900 Theobroma cacao HOM05D004165 ORTHO05D005063 2.0e-23 112.8 111 51.4
Potri.005G086100 Populus trichocarpa HOM05D004165 ORTHO05D005063 2.6e-23 112.5 112 50.9
PGR004G2408 Punica granatum HOM05D004165 ORTHO05D005063 2.6e-23 112.5 111 48.6
Hma1.2p1_0134F.1_g061540 Hydrangea macrophylla HOM05D004165 ORTHO05D005063 4.4e-23 111.7 107 51.4
Sed0015867 Sechium edule HOM05D004165 ORTHO05D005063 5.8e-23 111.3 108 50.9
CsaV3_6G042210 Cucumis sativus L. HOM05D004165 ORTHO05D005063 7.5e-23 110.9 111 47.7
PSO210G1143 Papaver somniferum HOM05D004165 ORTHO05D005063 9.8e-23 110.5 111 48.6
MELO3C007461.2 Cucumis melo HOM05D004165 ORTHO05D005063 1.3e-22 110.2 111 47.7
ClCG01G015940 Citrullus lanatus HOM05D004165 ORTHO05D005063 1.7e-22 109.8 111 46.8
Lalb_Chr13g0296271 Lupinus albus HOM05D004165 ORTHO05D005063 4.9e-22 108.2 111 47.7
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea HOM05D004165 ORTHO05D005063 6.4e-22 107.8 110 47.3
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea HOM05D004165 ORTHO05D005063 6.4e-22 107.8 110 47.3
PSO170G0015 Papaver somniferum HOM05D004165 ORTHO05D005063 6.4e-22 107.8 111 47.7
Sc03g0004750 Simmondsia chinensis HOM05D004165 ORTHO05D005063 6.4e-22 107.8 111 47.7
BolC1t00056H Brassica oleracea HOM05D004165 ORTHO05D005063 8.3e-22 107.5 111 50.5
C01p00530 Brassica napus HOM05D004165 ORTHO05D005063 1.4e-21 106.7 111 50.5
Lsat_1_v5_gn_9_57180 Lactuca sativa HOM05D004165 ORTHO05D005063 1.9e-21 106.3 108 49.1
CSS0013219 Camellia sinensis var. sinensis HOM05D004165 ORTHO05D005063 2.4e-21 105.9 111 51.4
HanXRQChr08g0218061 Helianthus annuus HOM05D004165 ORTHO05D005063 4.1e-21 105.1 111 46.8
vmacro12886 Vaccinium macrocarpon HOM05D004165 ORTHO05D005063 5.4e-21 104.8 109 50.5
Ca_17683_v3 Cicer arietinum L. HOM05D004165 ORTHO05D005063 1.2e-20 103.6 109 45.9
A01p00380 Brassica napus HOM05D004165 ORTHO05D005063 2.1e-20 102.8 111 48.6
BraA01t00046Z Brassica rapa HOM05D004165 ORTHO05D005063 2.1e-20 102.8 111 48.6
CARHR247290 Cardamine hirsuta HOM05D004165 ORTHO05D005063 2.7e-20 102.4 111 47.7
Aa31LG6G15850 Aethionema arabicum HOM05D004165 ORTHO05D005063 6.0e-20 101.3 112 47.3
AT4G39420 Arabidopsis thaliana HOM05D004165 ORTHO05D005063 6.0e-20 101.3 111 47.7
EL10Ac6g15255 Beta vulgaris HOM05D004165 ORTHO05D005063 1.0e-19 100.5 111 45.0
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 1.3e-19 100.1 114 43.9
Carub.0007s0134 Capsella rubella HOM05D004165 ORTHO05D005063 1.3e-19 100.1 111 48.6
AL7G11450 Arabidopsis lyrata HOM05D004165 ORTHO05D005063 1.7e-19 99.8 111 47.7
Sp7g36440 Schrenkiella parvula HOM05D004165 ORTHO05D005063 1.7e-19 99.8 111 46.8
Thhalv10024179m.g Eutrema salsugineum HOM05D004165 ORTHO05D005063 3.0e-19 99.0 111 47.7
VMungo0251G1264 Vigna mungo HOM05D004165 ORTHO05D005063 5.1e-19 98.2 110 47.3
Lj4g0014922 Lotus japonicus HOM05D004165 ORTHO05D005063 6.6e-19 97.8 109 45.0
Medtr8g092100 Medicago truncatula HOM05D004165 ORTHO05D005063 8.6e-19 97.4 109 45.9
Phvul.002G266300 Phaseolus vulgaris HOM05D004165 ORTHO05D005063 8.6e-19 97.4 110 45.5
CANSAT01G1143 Cannabis sativa HOM05D004165 ORTHO05D005063 1.1e-18 97.1 109 46.8
TPR.G2248 Trifolium pratense HOM05D004165 ORTHO05D005063 1.5e-18 96.7 109 43.1
Psat7g050200 Pisum sativum HOM05D004165 ORTHO05D005063 1.9e-18 96.3 109 43.1
Glyma.08G143200 Glycine max HOM05D004165 ORTHO05D005063 3.3e-18 95.5 110 44.5
TPR.G2323 Trifolium pratense HOM05D004165 ORTHO05D005063 7.3e-18 94.4 109 42.2
THA.LOC104804480 Tarenaya hassleriana HOM05D004165 ORTHO05D005063 1.6e-17 93.2 111 45.0
Glyma.05G185300 Glycine max HOM05D004165 ORTHO05D005063 1.4e-16 90.1 109 43.1
HPP92_013330 Vanilla planifolia HOM05D004165 ORTHO05D005063 1.8e-16 89.7 111 45.0
HPP92_013326 Vanilla planifolia HOM05D004165 ORTHO05D005063 4.0e-16 88.6 111 45.9
unitig_899.g14615 Utricularia gibba HOM05D004165 ORTHO05D005063 8.9e-16 87.4 111 43.2
CDE07G1357 Ceratophyllum demersum HOM05D004165 ORTHO05D005063 3.7e-14 82.0 115 40.9
SEGI_01323 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 3.5e-12 75.5 113 36.3
Actinidia28449 Actinidia chinensis HOM05D004165 ORTHO05D005063 4.6e-12 75.1 84 44.0
SHI11786 Sapria himalayana HOM05D004165 ORTHO05D005063 1.5e-10 70.1 122 30.3
Pp3c10_13600 Physcomitrium patens HOM05D004165 ORTHO05D005063 4.0e-08 62.0 114 34.2
Mapoly0066s0021 Marchantia polymorpha HOM05D004165 ORTHO05D005063 6.8e-08 61.2 115 32.2
Zm00001eb062420 Zea mays HOM05D004165 ORTHO05D005063 8.9e-08 60.8 108 29.6
Pp3c3_30110 Physcomitrium patens HOM05D004165 ORTHO05D005063 1.2e-07 60.5 119 32.8


User provided reference genes

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