Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.2e-103 379.8 189 100.0
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 3.1e-99 365.2 189 95.8
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 4.1e-99 364.8 189 95.2
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 5.0e-89 331.3 189 86.8
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.5e-89 330.5 191 87.4
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.5e-88 329.7 191 87.4
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 4.0e-86 321.6 190 84.7
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 8.6e-73 277.3 189 73.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 3.1e-70 268.9 188 71.8
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.9e-68 262.3 189 71.4
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 7.0e-67 257.7 191 69.1
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.2e-66 256.9 181 71.8
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 7.8e-66 254.2 190 68.9
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.9e-64 249.6 189 66.1
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 2.5e-64 249.2 189 65.1
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 4.3e-64 248.4 189 65.6
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.1e-63 246.1 186 65.1
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 6.2e-63 244.6 189 64.6
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 6.2e-63 244.6 189 64.0
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 6.2e-63 244.6 189 63.5
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 1.8e-62 243.0 189 61.9
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 4.0e-62 241.9 190 63.2
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 4.0e-62 241.9 189 61.9
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.8e-62 241.1 189 62.4
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.2e-61 240.4 192 63.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 1.2e-61 240.4 194 61.9
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.5e-61 240.0 190 63.7
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.5e-61 240.0 159 76.7
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.5e-61 240.0 190 62.6
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 2.6e-61 239.2 189 65.1
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.4e-61 238.8 189 61.9
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 7.5e-61 237.7 189 61.9
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 7.5e-61 237.7 194 61.9
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 9.8e-61 237.3 189 63.5
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.3e-60 236.9 189 63.5
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 4.9e-60 235.0 195 61.5
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 4.9e-60 235.0 188 62.8
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 8.3e-60 234.2 192 61.5
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.1e-59 233.8 189 60.3
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.1e-59 233.8 189 60.3
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.1e-59 233.8 189 58.7
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 3.2e-59 232.3 189 59.3
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.2e-59 232.3 191 64.9
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 9.2e-59 230.7 191 61.8
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.2e-58 230.3 189 60.8
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.2e-58 230.3 189 60.8
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.6e-58 229.9 193 62.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 2.7e-58 229.2 189 59.8
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 4.6e-58 228.4 189 59.3
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 4.6e-58 228.4 189 58.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.0e-57 227.3 192 60.9
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.0e-57 227.3 189 58.7
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.3e-57 226.9 195 59.5
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.3e-57 226.9 189 57.7
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.3e-57 226.1 189 59.3
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 3.0e-57 225.7 189 57.7
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.0e-57 225.7 189 57.7
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.0e-57 225.7 189 57.7
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 5.1e-57 224.9 191 59.7
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 6.6e-57 224.6 185 60.0
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 6.6e-57 224.6 189 60.8
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 8.6e-57 224.2 189 60.8
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 8.6e-57 224.2 189 59.3
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-56 223.8 189 58.2
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.9e-56 223.0 188 62.2
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 2.5e-56 222.6 188 61.7
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 3.3e-56 222.2 189 56.1
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 4.3e-56 221.9 190 62.1
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 4.3e-56 221.9 190 61.1
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 7.3e-56 221.1 189 56.6
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.8e-55 219.2 195 57.9
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 4.7e-55 218.4 190 60.5
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 4.7e-55 218.4 195 58.5
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 4.7e-55 218.4 183 61.2
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 6.2e-55 218.0 195 59.0
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 1.1e-54 217.2 189 61.4
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.1e-54 217.2 189 61.4
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.1e-54 215.7 189 60.8
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 4.0e-54 215.3 195 55.9
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.0e-54 215.3 189 60.8
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 4.0e-54 215.3 251 48.2
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 8.9e-54 214.2 189 59.3
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.4e-53 212.2 223 51.1
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 2.2e-52 209.5 200 59.5
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.9e-52 209.1 191 58.1
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 4.1e-51 205.3 160 66.2
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 5.4e-51 204.9 188 58.0
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 9.2e-51 204.1 175 57.1
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 4.6e-50 201.8 161 62.7
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 3.0e-49 199.1 200 56.5
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.2e-47 193.7 150 58.0
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 6.2e-47 191.4 142 62.0
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.4e-46 189.5 151 60.9
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 5.2e-46 188.3 144 66.0
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.6e-45 186.0 151 59.6
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.7e-44 183.3 140 65.0
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.1e-42 176.4 190 52.6
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 6.6e-41 171.4 151 55.0
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.4e-38 163.7 189 49.7
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.4e-38 162.9 96 87.5
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.0e-37 159.8 190 47.9
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 3.4e-37 159.1 132 56.8
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 4.4e-37 158.7 89 86.5
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 7.3e-32 141.4 190 45.3
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.4e-30 137.1 187 42.2
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.1e-27 127.5 192 44.3
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.9e-27 126.7 161 44.1
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 2.4e-27 126.3 87 65.5
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 3.3e-24 115.9 161 38.5
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.6e-21 106.3 103 51.5
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 4.5e-21 105.5 98 52.0
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 2.2e-20 103.2 133 39.8
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.1e-19 100.9 75 65.3
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.1e-18 96.7 87 60.9
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 3.5e-18 95.9 140 34.3
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.3e-16 89.4 66 68.2
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 4.2e-11 72.4 95 32.6
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.9e-09 65.9 100 41.0
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 2.5e-08 63.2 51 64.7
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 8.2e-07 58.2 45 68.9


User provided reference genes

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