Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401020232 Solanum tuberosum HOM05D004665 ORTHO05D006264 2.1e-77 292.4 153 100.0
CAN.G473.165 Capsicum annuum HOM05D004665 ORTHO05D006264 1.7e-71 272.7 153 94.8
Nitab4.5_0000519g0340 Nicotiana tabacum HOM05D004665 ORTHO05D006264 2.7e-69 265.4 147 93.9
Peaxi162Scf00420g00913 Petunia axillaris HOM05D004665 ORTHO05D006264 1.0e-68 263.5 155 90.3
Nitab4.5_0002901g0090 Nicotiana tabacum HOM05D004665 ORTHO05D006264 2.3e-68 262.3 147 92.5
Cc07_g01420 Coffea canephora HOM05D004665 ORTHO05D006264 1.0e-52 210.3 154 70.1
MSTRG.3035 Avicennia marina HOM05D004665 ORTHO05D006264 1.4e-49 199.9 153 66.0
Rhsim08G0037600 Rhododendron simsii HOM05D004665 ORTHO05D006264 2.5e-46 189.1 151 66.2
Hma1.2p1_0421F.1_g149890 Hydrangea macrophylla HOM05D004665 ORTHO05D006264 4.7e-45 184.9 149 65.1
Oeu050153.1 Olea europaea HOM05D004665 ORTHO05D006264 4.7e-45 184.9 140 66.4
vmacro18403 Vaccinium macrocarpon HOM05D004665 ORTHO05D006264 6.8e-44 181.0 151 62.9
SGA_v2.0_scaffold44G16957 Striga asiatica HOM05D004665 ORTHO05D006264 8.8e-44 180.6 144 64.6
Prupe.3G315100 Prunus persica HOM05D004665 ORTHO05D006264 1.2e-43 180.3 149 63.8
Migut.F00002 Erythranthe guttata HOM05D004665 ORTHO05D006264 1.5e-43 179.9 149 61.7
Sc16g0004200 Simmondsia chinensis HOM05D004665 ORTHO05D006264 2.6e-43 179.1 150 58.7
CSS0012528 Camellia sinensis var. sinensis HOM05D004665 ORTHO05D006264 4.4e-43 178.3 146 65.1
CSS0013787 Camellia sinensis var. sinensis HOM05D004665 ORTHO05D006264 4.4e-43 178.3 146 65.1
RcHm_v2.0_Chr2g0176711 Rosa chinensis HOM05D004665 ORTHO05D006264 5.7e-43 177.9 147 61.2
Thecc.04G051300 Theobroma cacao HOM05D004665 ORTHO05D006264 5.7e-43 177.9 149 60.4
FvH4_6g54450 Fragaria vesca HOM05D004665 ORTHO05D006264 9.8e-43 177.2 150 62.0
FAN02G3991 Fragaria x ananassa HOM05D004665 ORTHO05D006264 9.8e-43 177.2 150 62.0
FAN09G0696 Fragaria x ananassa HOM05D004665 ORTHO05D006264 9.8e-43 177.2 150 62.0
FAN14G5400 Fragaria x ananassa HOM05D004665 ORTHO05D006264 9.8e-43 177.2 150 62.0
Cpa.g.sc70.39 Carica papaya HOM05D004665 ORTHO05D006264 4.9e-42 174.9 150 59.3
MD09G1001000 Malus domestica HOM05D004665 ORTHO05D006264 8.3e-42 174.1 149 61.7
Potri.014G139700 Populus trichocarpa HOM05D004665 ORTHO05D006264 2.4e-41 172.6 149 61.7
VMungo0464G1810 Vigna mungo HOM05D004665 ORTHO05D006264 5.4e-41 171.4 147 57.1
Manes.04G097200 Manihot esculenta HOM05D004665 ORTHO05D006264 9.2e-41 170.6 151 58.3
Nn4g22078 Nelumbo nucifera HOM05D004665 ORTHO05D006264 1.2e-40 170.2 147 57.8
Phvul.004G068100 Phaseolus vulgaris HOM05D004665 ORTHO05D006264 1.6e-40 169.9 147 57.8
TAR622G0174 Trochodendron aralioides HOM05D004665 ORTHO05D006264 1.6e-40 169.9 150 60.7
GSVIVG01032952001 Vitis vinifera HOM05D004665 ORTHO05D006264 2.0e-40 169.5 147 59.2
MD17G1004100 Malus domestica HOM05D004665 ORTHO05D006264 5.9e-40 167.9 149 59.7
Dinv33260 Davidia involucrata HOM05D004665 ORTHO05D006264 1.0e-39 167.2 112 80.4
PGR142G3265 Punica granatum HOM05D004665 ORTHO05D006264 3.8e-39 165.2 143 59.4
CiPaw.04G000200 Carya illinoinensis HOM05D004665 ORTHO05D006264 5.0e-39 164.9 145 60.0
Hund04137 Selenicereus undatus HOM05D004665 ORTHO05D006264 5.0e-39 164.9 147 56.5
Ciclev10015243m.g Citrus clementina HOM05D004665 ORTHO05D006264 8.6e-39 164.1 150 59.3
QL02p068558 Quercus lobata HOM05D004665 ORTHO05D006264 8.6e-39 164.1 152 57.2
COL.COLO4_13402 Corchorus olitorius HOM05D004665 ORTHO05D006264 1.5e-38 163.3 140 58.6
Glyma.16G149500 Glycine max HOM05D004665 ORTHO05D006264 1.5e-38 163.3 147 56.5
Gohir.D11G065800 Gossypium hirsutum HOM05D004665 ORTHO05D006264 1.5e-38 163.3 149 53.7
Gohir.D11G065866 Gossypium hirsutum HOM05D004665 ORTHO05D006264 1.5e-38 163.3 149 53.7
Gorai.007G071300 Gossypium raimondii HOM05D004665 ORTHO05D006264 1.9e-38 162.9 149 53.7
Sabra14G0105400 Salix brachista HOM05D004665 ORTHO05D006264 4.3e-38 161.8 149 58.4
Medtr6g033100 Medicago truncatula HOM05D004665 ORTHO05D006264 5.6e-38 161.4 147 55.1
CANSAT64G2474 Cannabis sativa HOM05D004665 ORTHO05D006264 9.5e-38 160.6 148 56.1
AUR62032536 Chenopodium quinoa HOM05D004665 ORTHO05D006264 9.5e-38 160.6 147 59.2
Glyma.02G068000 Glycine max HOM05D004665 ORTHO05D006264 9.5e-38 160.6 147 55.8
Cfa007139 Carpinus fangiana HOM05D004665 ORTHO05D006264 1.6e-37 159.8 140 64.3
Lj2g0020206 Lotus japonicus HOM05D004665 ORTHO05D006264 1.6e-37 159.8 147 55.8
Gohir.A11G061900 Gossypium hirsutum HOM05D004665 ORTHO05D006264 2.1e-37 159.5 149 53.0
Haze_14984 Corylus avellana HOM05D004665 ORTHO05D006264 2.8e-37 159.1 142 64.1
Duzib264G1200 Durio zibethinus HOM05D004665 ORTHO05D006264 3.6e-37 158.7 156 54.5
Duzib147G0914 Durio zibethinus HOM05D004665 ORTHO05D006264 4.7e-37 158.3 151 53.0
Psat1g014640 Pisum sativum HOM05D004665 ORTHO05D006264 4.7e-37 158.3 147 54.4
AUR62017468 Chenopodium quinoa HOM05D004665 ORTHO05D006264 6.1e-37 157.9 150 57.3
AL5G15510 Arabidopsis lyrata HOM05D004665 ORTHO05D006264 1.0e-36 157.1 146 58.9
MELO3C014760.2 Cucumis melo HOM05D004665 ORTHO05D006264 1.0e-36 157.1 151 52.3
Lalb_Chr21g0316981 Lupinus albus HOM05D004665 ORTHO05D006264 1.0e-36 157.1 147 56.5
Ca_04509_v3 Cicer arietinum L. HOM05D004665 ORTHO05D006264 1.8e-36 156.4 147 56.5
AT3G26670 Arabidopsis thaliana HOM05D004665 ORTHO05D006264 4.0e-36 155.2 146 58.2
SalBow4G0739 Salvia bowleyana HOM05D004665 ORTHO05D006264 4.0e-36 155.2 151 54.3
Sp2g15790 Schrenkiella parvula HOM05D004665 ORTHO05D006264 4.0e-36 155.2 150 56.7
TPR.G6109 Trifolium pratense HOM05D004665 ORTHO05D006264 5.2e-36 154.8 147 53.1
Aa31LG2G5890 Aethionema arabicum HOM05D004665 ORTHO05D006264 6.8e-36 154.5 146 52.7
CsaV3_3G020050 Cucumis sativus L. HOM05D004665 ORTHO05D006264 6.8e-36 154.5 151 51.0
TWI60G0175 Tripterygium wilfordii HOM05D004665 ORTHO05D006264 6.8e-36 154.5 147 57.8
Carub.0005s0467 Capsella rubella HOM05D004665 ORTHO05D006264 8.9e-36 154.1 146 56.2
ClCG05G012480 Citrullus lanatus HOM05D004665 ORTHO05D006264 1.2e-35 153.7 140 55.7
THA.LOC104824001 Tarenaya hassleriana HOM05D004665 ORTHO05D006264 1.2e-35 153.7 141 58.9
Aqoxy5G03000 Aquilegia oxysepala HOM05D004665 ORTHO05D006264 1.5e-35 153.3 148 54.7
C02p53220 Brassica napus HOM05D004665 ORTHO05D006264 1.5e-35 153.3 145 58.6
Atru.chr6.2724 Acer truncatum HOM05D004665 ORTHO05D006264 2.6e-35 152.5 141 55.3
Thhalv10004224m.g Eutrema salsugineum HOM05D004665 ORTHO05D006264 2.6e-35 152.5 147 55.1
BcaC03g17377 Brassica carinata HOM05D004665 ORTHO05D006264 4.4e-35 151.8 145 58.6
A02p34660 Brassica napus HOM05D004665 ORTHO05D006264 4.4e-35 151.8 145 57.9
BolC2t11394H Brassica oleracea HOM05D004665 ORTHO05D006264 4.4e-35 151.8 145 58.6
BraA02t08474Z Brassica rapa HOM05D004665 ORTHO05D006264 4.4e-35 151.8 145 57.9
Eucgr.I01571 Eucalyptus grandis HOM05D004665 ORTHO05D006264 5.7e-35 151.4 150 54.0
Lj7A619T48 Lonicera japonica HOM05D004665 ORTHO05D006264 7.5e-35 151.0 153 60.1
arahy.Tifrunner.gnm1.ann1.1F18R3 Arachis hypogaea HOM05D004665 ORTHO05D006264 1.7e-34 149.8 148 55.4
A06p41830 Brassica napus HOM05D004665 ORTHO05D006264 2.9e-34 149.1 147 55.1
C07p35690 Brassica napus HOM05D004665 ORTHO05D006264 2.9e-34 149.1 147 55.1
BolC7t44090H Brassica oleracea HOM05D004665 ORTHO05D006264 2.9e-34 149.1 147 55.1
BraA06t27102Z Brassica rapa HOM05D004665 ORTHO05D006264 2.9e-34 149.1 147 55.1
MBI11_g30566_MAGBIO Magnolia biondii HOM05D004665 ORTHO05D006264 4.9e-34 148.3 139 58.3
PSO478G3167 Papaver somniferum HOM05D004665 ORTHO05D006264 4.9e-34 148.3 149 57.0
BcaC06g31051 Brassica carinata HOM05D004665 ORTHO05D006264 6.4e-34 147.9 147 55.1
BcaB07g30221 Brassica carinata HOM05D004665 ORTHO05D006264 8.3e-34 147.5 148 56.1
BcaB07g30223 Brassica carinata HOM05D004665 ORTHO05D006264 8.3e-34 147.5 148 56.1
PSO017G6847 Papaver somniferum HOM05D004665 ORTHO05D006264 1.4e-33 146.7 149 57.0
THA.LOC104805296 Tarenaya hassleriana HOM05D004665 ORTHO05D006264 3.2e-33 145.6 135 59.3
ECA238G3366 Erigeron canadensis HOM05D004665 ORTHO05D006264 4.1e-33 145.2 145 54.5
Sed0011932 Sechium edule HOM05D004665 ORTHO05D006264 4.1e-33 145.2 140 55.0
CARHR147680 Cardamine hirsuta HOM05D004665 ORTHO05D006264 1.6e-32 143.3 146 55.5
Lalb_Chr02g0156931 Lupinus albus HOM05D004665 ORTHO05D006264 5.9e-32 141.4 148 52.0
HanXRQChr07g0197991 Helianthus annuus HOM05D004665 ORTHO05D006264 1.0e-31 140.6 142 54.2
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 1.3e-31 140.2 147 54.4
Nn3g16211 Nelumbo nucifera HOM05D004665 ORTHO05D006264 1.3e-31 140.2 125 55.2
Manes.11G073500 Manihot esculenta HOM05D004665 ORTHO05D006264 1.7e-31 139.8 140 55.7
Atru.chr1.2008 Acer truncatum HOM05D004665 ORTHO05D006264 5.0e-31 138.3 141 50.4
CDE06G1855 Ceratophyllum demersum HOM05D004665 ORTHO05D006264 5.0e-31 138.3 148 49.3
Aqoxy271s005 Aquilegia oxysepala HOM05D004665 ORTHO05D006264 1.5e-30 136.7 131 55.7
Ah.02g128750 Amaranthus hybridus HOM05D000154 ORTHO05D000092 2.5e-30 136.0 156 48.7
EL10Ac6g13903 Beta vulgaris HOM05D004665 ORTHO05D006264 2.5e-30 136.0 152 50.0
arahy.Tifrunner.gnm1.ann1.3E1BT5 Arachis hypogaea HOM05D004665 ORTHO05D006264 7.3e-30 134.4 171 47.4
ATR0582G225 Amborella trichopoda HOM05D004665 ORTHO05D006264 3.2e-25 119.0 147 47.6
Os02g0518100 Oryza sativa ssp. japonica HOM05D004665 ORTHO05D006264 1.6e-21 106.7 128 49.2
Zm00001eb242230 Zea mays HOM05D004665 ORTHO05D006264 1.1e-20 104.0 131 48.9
Zm00001eb393410 Zea mays HOM05D004665 ORTHO05D006264 8.9e-20 100.9 127 50.4
Actinidia19542 Actinidia chinensis HOM05D004665 ORTHO05D006264 5.8e-19 98.2 114 53.5
HPP92_021581 Vanilla planifolia HOM05D004665 ORTHO05D006264 8.3e-18 94.4 128 43.8
HPP92_009749 Vanilla planifolia HOM05D004665 ORTHO05D006264 4.6e-16 88.6 138 37.0
HPP92_009766 Vanilla planifolia HOM05D004665 ORTHO05D006264 4.6e-16 88.6 138 37.0
Peaxi162Scf00058g00033 Petunia axillaris HOM05D004665 ORTHO05D006264 5.6e-14 81.6 59 81.4
HanXRQChr14g0451551 Helianthus annuus HOM05D004665 ORTHO05D006264 3.8e-10 68.9 76 53.9
Actinidia37709 Actinidia chinensis HOM05D004665 ORTHO05D006264 5.4e-09 65.1 63 61.9
Pp3c8_3640 Physcomitrium patens HOM05D004665 ORTHO05D006264 2.1e-08 63.2 124 32.3
Mapoly0166s0011 Marchantia polymorpha HOM05D004665 ORTHO05D006264 2.7e-08 62.8 116 32.8
Nn6g33393 Nelumbo nucifera HOM05D004665 ORTHO05D006264 1.7e-07 60.1 93 44.1
SMO266G0026 Selaginella moellendorffii HOM05D004665 ORTHO05D006264 6.6e-07 58.2 137 30.7
CAN.G1393.18 Capsicum annuum HOM05D004665 ORTHO05D006264 1.1e-06 57.4 63 63.5
Nitab4.5_0003951g0020 Nicotiana tabacum HOM05D004665 ORTHO05D006264 4.3e-06 55.5 61 57.4


User provided reference genes

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