Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401019457 Solanum tuberosum HOM05D001069 ORTHO05D007586 1.1e-55 219.9 129 100.0
Solyc01g097300.4 Solanum lycopersicum HOM05D001069 ORTHO05D007586 1.1e-52 209.9 129 96.1
Sopen01g040970 Solanum pennellii HOM05D001069 ORTHO05D007586 1.1e-52 209.9 129 96.1
Nitab4.5_0001592g0010 Nicotiana tabacum HOM05D001069 ORTHO05D007586 4.8e-51 204.5 129 82.9
Nitab4.5_0008996g0040 Nicotiana tabacum HOM05D001069 ORTHO05D007586 4.8e-51 204.5 129 82.9
CAN.G134.94 Capsicum annuum HOM05D001069 ORTHO05D007586 3.1e-50 201.8 128 82.0
Peaxi162Scf00282g00417 Petunia axillaris HOM05D001069 ORTHO05D007586 3.1e-50 201.8 129 81.4
MSTRG.20449 Avicennia marina HOM05D001069 ORTHO05D007586 1.7e-48 196.1 129 79.8
SGA_v2.0_scaffold5G02970 Striga asiatica HOM05D001069 ORTHO05D007586 1.1e-47 193.4 129 79.1
Oeu002656.1 Olea europaea HOM05D001069 ORTHO05D007586 1.5e-47 193.0 129 78.3
Migut.B01094 Erythranthe guttata HOM05D001069 ORTHO05D007586 1.9e-47 192.6 129 79.8
Psat6g145040 Pisum sativum HOM05D001069 ORTHO05D007586 3.2e-47 191.8 129 79.8
Ca_10042_v3 Cicer arietinum L. HOM05D001069 ORTHO05D007586 1.0e-45 186.8 122 79.5
Gohir.D13G107700 Gossypium hirsutum HOM05D001069 ORTHO05D007586 1.0e-45 186.8 127 76.4
MD04G1225700 Malus domestica HOM05D001069 ORTHO05D007586 1.0e-45 186.8 129 77.5
Thecc.05G281200 Theobroma cacao HOM05D001069 ORTHO05D007586 1.0e-45 186.8 127 76.4
TPR.G12907 Trifolium pratense HOM05D001069 ORTHO05D007586 1.0e-45 186.8 129 78.3
Gohir.A13G104300 Gossypium hirsutum HOM05D001069 ORTHO05D007586 1.4e-45 186.4 127 75.6
Medtr1g080770 Medicago truncatula HOM05D001069 ORTHO05D007586 1.4e-45 186.4 129 77.5
Gorai.013G120600 Gossypium raimondii HOM05D001069 ORTHO05D007586 3.0e-45 185.3 125 76.8
CANSAT54G2612 Cannabis sativa HOM05D001069 ORTHO05D007586 4.0e-45 184.9 128 74.2
ECA233G1896 Erigeron canadensis HOM05D000316 ORTHO05D000374 4.0e-45 184.9 129 76.7
MD12G1242900 Malus domestica HOM05D001069 ORTHO05D007586 4.0e-45 184.9 129 76.7
Duzib128G0644 Durio zibethinus HOM05D001069 ORTHO05D007586 5.2e-45 184.5 127 74.8
Prupe.6G344500 Prunus persica HOM05D001069 ORTHO05D007586 5.2e-45 184.5 129 76.7
unitig_52.g17389 Utricularia gibba HOM05D001069 ORTHO05D007586 5.2e-45 184.5 129 76.0
Lalb_Chr21g0311011 Lupinus albus HOM05D001069 ORTHO05D007586 6.7e-45 184.1 129 76.0
arahy.Tifrunner.gnm1.ann1.SY74BB Arachis hypogaea HOM05D001069 ORTHO05D007586 8.8e-45 183.7 129 76.0
GSVIVG01036275001 Vitis vinifera HOM05D001069 ORTHO05D007586 8.8e-45 183.7 129 76.7
arahy.Tifrunner.gnm1.ann1.AYUH3A Arachis hypogaea HOM05D001069 ORTHO05D007586 1.2e-44 183.3 129 76.0
CiPaw.08G122900 Carya illinoinensis HOM05D001069 ORTHO05D007586 2.0e-44 182.6 129 75.2
THA.LOC104823751 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 2.0e-44 182.6 129 74.4
CSS0013670 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 2.6e-44 182.2 129 75.2
CSS0018717 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 2.6e-44 182.2 129 75.2
HanXRQChr16g0514711 Helianthus annuus HOM05D001069 ORTHO05D007586 4.4e-44 181.4 129 75.2
VMungo0720G0790 Vigna mungo HOM05D001069 ORTHO05D007586 4.4e-44 181.4 129 75.2
Haze_04370 Corylus avellana HOM05D001069 ORTHO05D007586 5.7e-44 181.0 129 76.0
Duzib177G1121 Durio zibethinus HOM05D001069 ORTHO05D007586 5.7e-44 181.0 127 74.0
Cfa006409 Carpinus fangiana HOM05D001069 ORTHO05D001549 7.5e-44 180.6 122 77.9
COL.COLO4_15368 Corchorus olitorius HOM05D001069 ORTHO05D007586 7.5e-44 180.6 125 74.4
Glyma.10G162900 Glycine max HOM05D001069 ORTHO05D007586 7.5e-44 180.6 129 74.4
Glyma.20G225500 Glycine max HOM05D001069 ORTHO05D007586 7.5e-44 180.6 129 74.4
Lj5g0026442 Lotus japonicus HOM05D001069 ORTHO05D007586 7.5e-44 180.6 129 74.4
Manes.09G151800 Manihot esculenta HOM05D001069 ORTHO05D007586 7.5e-44 180.6 129 74.4
Phvul.007G187900 Phaseolus vulgaris HOM05D001069 ORTHO05D007586 7.5e-44 180.6 129 75.2
Rhsim07G0074100 Rhododendron simsii HOM05D001069 ORTHO05D007586 7.5e-44 180.6 129 75.2
Nn1g02583 Nelumbo nucifera HOM05D001069 ORTHO05D007586 9.7e-44 180.3 129 73.6
RcHm_v2.0_Chr3g0450701 Rosa chinensis HOM05D001069 ORTHO05D007586 9.7e-44 180.3 129 73.6
PGR004G2600 Punica granatum HOM05D001069 ORTHO05D007586 1.3e-43 179.9 129 73.6
Sc09g0003960 Simmondsia chinensis HOM05D001069 ORTHO05D007586 1.3e-43 179.9 129 72.1
BcaB07g34137 Brassica carinata HOM05D001069 ORTHO05D007586 1.7e-43 179.5 128 71.9
Manes.08G135700 Manihot esculenta HOM05D001069 ORTHO05D007586 1.7e-43 179.5 129 75.2
Actinidia32808 Actinidia chinensis HOM05D001069 ORTHO05D007586 2.2e-43 179.1 129 75.2
FAN09G0270 Fragaria x ananassa HOM05D001069 ORTHO05D007586 2.2e-43 179.1 129 72.9
HanXRQChr17g0559331 Helianthus annuus HOM05D001069 ORTHO05D007586 2.2e-43 179.1 129 85.3
THA.LOC104805822 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 2.2e-43 179.1 129 73.6
Atru.chr2.835 Acer truncatum HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 71.3
DCAR_006651 Daucus carota HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 75.2
FvH4_6g02700 Fragaria vesca HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 72.9
FAN14G5212 Fragaria x ananassa HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 72.9
Lalb_Chr06g0168091 Lupinus albus HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 73.6
A06p05680 Brassica napus HOM05D001069 ORTHO05D007586 3.7e-43 178.3 128 71.1
Cc02_g30720 Coffea canephora HOM05D001069 ORTHO05D007586 3.7e-43 178.3 129 72.9
Eucgr.H04324 Eucalyptus grandis HOM05D001069 ORTHO05D007586 4.8e-43 177.9 129 72.9
TAR636G2667 Trochodendron aralioides HOM05D001069 ORTHO05D001549 6.3e-43 177.6 122 74.6
Dinv20292 Davidia involucrata HOM05D001069 ORTHO05D007586 8.2e-43 177.2 129 73.6
FAN02G3324 Fragaria x ananassa HOM05D001069 ORTHO05D007586 8.2e-43 177.2 129 72.9
FAN05G3732 Fragaria x ananassa HOM05D001069 ORTHO05D007586 8.2e-43 177.2 129 72.1
QL03p027238 Quercus lobata HOM05D001069 ORTHO05D007586 8.2e-43 177.2 128 74.2
CiPaw.07G068400 Carya illinoinensis HOM05D001069 ORTHO05D007586 1.1e-42 176.8 129 72.1
FAN14G1639 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.1e-42 176.8 129 72.1
FAN14G4385 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.1e-42 176.8 129 72.1
Potri.013G042100 Populus trichocarpa HOM05D001069 ORTHO05D007586 1.1e-42 176.8 129 73.6
C05p06850 Brassica napus HOM05D001069 ORTHO05D007586 1.4e-42 176.4 127 70.1
CARHR008700 Cardamine hirsuta HOM05D001069 ORTHO05D007586 1.8e-42 176.0 131 69.5
AL1G19210 Arabidopsis lyrata HOM05D001069 ORTHO05D007586 3.1e-42 175.3 128 68.8
Potri.005G054500 Populus trichocarpa HOM05D001069 ORTHO05D007586 3.1e-42 175.3 129 72.9
Hund22103 Selenicereus undatus HOM05D001069 ORTHO05D007586 3.1e-42 175.3 123 71.5
AT1G08780 Arabidopsis thaliana HOM05D001069 ORTHO05D007586 4.1e-42 174.9 128 68.8
Sp1g07420 Schrenkiella parvula HOM05D001069 ORTHO05D007586 4.1e-42 174.9 131 69.5
CsaV3_2G004010 Cucumis sativus L. HOM05D001069 ORTHO05D007586 9.1e-42 173.7 129 76.0
Sabra05G0047400 Salix brachista HOM05D001069 ORTHO05D001549 9.1e-42 173.7 129 72.9
BcaC07g38446 Brassica carinata HOM05D001069 ORTHO05D007586 1.6e-41 172.9 131 67.2
C08p12160 Brassica napus HOM05D001069 ORTHO05D007586 1.6e-41 172.9 131 67.2
AUR62000994 Chenopodium quinoa HOM05D001069 ORTHO05D007586 1.6e-41 172.9 129 70.5
AUR62004967 Chenopodium quinoa HOM05D001069 ORTHO05D007586 2.0e-41 172.6 129 69.8
MELO3C004390.2 Cucumis melo HOM05D001069 ORTHO05D007586 2.0e-41 172.6 129 69.0
A08p34980 Brassica napus HOM05D001069 ORTHO05D007586 2.7e-41 172.2 127 66.9
Thhalv10009095m.g Eutrema salsugineum HOM05D001069 ORTHO05D007586 2.7e-41 172.2 131 68.7
PSO210G4375 Papaver somniferum HOM05D001069 ORTHO05D007586 2.7e-41 172.2 129 71.3
BraA08t35409Z Brassica rapa HOM05D001069 ORTHO05D007586 3.5e-41 171.8 127 66.9
BcaNung06267 Brassica carinata HOM05D001069 ORTHO05D007586 4.5e-41 171.4 131 66.4
Nn3g19512 Nelumbo nucifera HOM05D001069 ORTHO05D007586 7.7e-41 170.6 129 69.0
Os03g0628900 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D007586 7.7e-41 170.6 129 66.7
PSO832G3124 Papaver somniferum HOM05D001069 ORTHO05D007586 1.0e-40 170.2 129 70.5
Aqoxy2G00949 Aquilegia oxysepala HOM05D001069 ORTHO05D007586 1.3e-40 169.9 129 68.2
Carub.0001s0812 Capsella rubella HOM05D001069 ORTHO05D007586 2.2e-40 169.1 119 71.4
ATR0665G433 Amborella trichopoda HOM05D001069 ORTHO05D007586 2.9e-40 168.7 129 73.6
ClCG02G016730 Citrullus lanatus HOM05D001069 ORTHO05D007586 2.9e-40 168.7 122 69.7
Sed0025346 Sechium edule HOM05D001069 ORTHO05D007586 2.9e-40 168.7 129 67.4
EL10Ac4g09163 Beta vulgaris HOM05D001069 ORTHO05D007586 3.8e-40 168.3 129 67.4
CDE06G2591 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 3.8e-40 168.3 129 68.2
BolC5t29444H Brassica oleracea HOM05D001069 ORTHO05D007586 5.0e-40 167.9 119 70.6
BraA06t23778Z Brassica rapa HOM05D001069 ORTHO05D007586 5.0e-40 167.9 119 70.6
Aa31sc20G40 Aethionema arabicum HOM05D001069 ORTHO05D007586 6.5e-40 167.5 129 68.2
CDE07G0518 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 1.1e-39 166.8 129 76.0
Zm00001eb051110 Zea mays HOM05D001069 ORTHO05D007586 5.5e-39 164.5 129 75.2
MBI04_g44868_MAGBIO Magnolia biondii HOM05D001069 ORTHO05D007586 7.2e-39 164.1 129 76.7
Ciclev10029576m.g Citrus clementina HOM05D001069 ORTHO05D007586 9.4e-39 163.7 129 66.7
HPP92_026288 Vanilla planifolia HOM05D001069 ORTHO05D007586 9.4e-39 163.7 129 75.2
TWI12G0612 Tripterygium wilfordii HOM05D001069 ORTHO05D007586 2.1e-38 162.5 129 67.4
Zm00001eb218870 Zea mays HOM05D001069 ORTHO05D007586 1.4e-37 159.8 129 73.6
Sed0020567 Sechium edule HOM05D001069 ORTHO05D007586 1.8e-37 159.5 129 63.6
BolC8t48854H Brassica oleracea HOM05D001069 ORTHO05D007586 2.3e-37 159.1 152 55.9
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 2.2e-35 152.5 154 58.4
Pp3c16_6640 Physcomitrium patens HOM05D001069 ORTHO05D007586 4.8e-35 151.4 129 72.1
AagrBONN_evm.TU.Sc2ySwM_369.398 Anthoceros agrestis HOM05D001069 ORTHO05D007586 1.7e-32 142.9 129 68.2
CBR_g8595 Chara braunii HOM05D001069 ORTHO05D007586 3.8e-32 141.7 122 59.0
Mapoly0094s0008 Marchantia polymorpha HOM05D001069 ORTHO05D007586 6.5e-32 141.0 129 67.4
SMO356G0364 Selaginella moellendorffii HOM05D001069 ORTHO05D007586 6.1e-30 134.4 130 64.6
arahy.Tifrunner.gnm1.ann1.VQ2WN5 Arachis hypogaea HOM05D001069 ORTHO05D007586 1.5e-28 129.8 81 77.8
Sabra13G0038700 Salix brachista HOM05D001069 ORTHO05D007586 1.0e-24 117.1 88 70.5
vmacro13808 Vaccinium macrocarpon HOM05D001069 ORTHO05D007586 1.7e-24 116.3 87 71.3
Lsat_1_v5_gn_5_68360 Lactuca sativa HOM05D001069 ORTHO05D007586 8.6e-24 114.0 87 69.0
MCO16G237 Micromonas commoda HOM05D001069 ORTHO05D007586 1.0e-21 107.1 121 46.3
SHI18420 Sapria himalayana HOM05D001069 ORTHO05D007586 5.2e-21 104.8 87 62.1
Cre16.g671750 Chlamydomonas reinhardtii HOM05D001069 ORTHO05D007586 1.2e-17 93.6 121 43.0
PRCOL_00003582 Prasinoderma coloniale HOM05D001069 ORTHO05D007586 1.2e-14 83.6 121 38.8
arahy.Tifrunner.gnm1.ann1.X5I3PL Arachis hypogaea HOM05D001069 ORTHO05D007586 1.3e-11 73.6 46 78.3
TAR365G0807 Trochodendron aralioides HOM05D001069 ORTHO05D007586 1.9e-10 69.7 61 57.4
Sabra13G0038600 Salix brachista HOM05D000002 ORTHO05D000001 9.2e-10 67.4 57 66.7
arahy.Tifrunner.gnm1.ann1.JAH3YR Arachis hypogaea HOM05D001069 ORTHO05D007586 7.8e-09 64.3 35 85.7
TAR633G2811 Trochodendron aralioides HOM05D001069 ORTHO05D007586 5.0e-08 61.6 32 87.5
SHI18422 Sapria himalayana HOM05D001069 ORTHO05D007586 9.5e-07 57.4 38 71.1
arahy.Tifrunner.gnm1.ann1.VDJK8S Arachis hypogaea HOM05D001069 ORTHO05D007586 8.1e-06 54.3 35 71.4


User provided reference genes

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