Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.4e-107 392.5 243 100.0
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.7e-60 235.7 157 75.8
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 1.8e-43 180.3 150 60.0
CAN.G2504.1 Capsicum annuum HOM05D004064 ORTHO05D009909 2.7e-31 139.8 107 65.4
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.7e-26 123.2 123 48.8
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.5e-26 122.5 130 50.0
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.8e-25 119.4 123 48.8
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.6e-25 118.6 157 43.3
CAN.G423.33 Capsicum annuum HOM05D004064 ORTHO05D009909 1.5e-24 117.5 115 53.9
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.5e-24 116.7 157 40.1
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.2e-23 114.4 129 47.3
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 2.3e-22 110.2 173 39.3
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 8.9e-22 108.2 157 38.2
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 1.5e-21 107.5 120 44.2
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 1.1e-19 101.3 87 50.6
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.9e-18 95.5 97 44.3
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.3e-17 94.4 88 45.5
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 4.3e-16 89.4 162 32.7
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-16 89.0 113 42.5
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-16 89.0 113 42.5
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 5.6e-16 89.0 113 42.5
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.3e-16 88.6 93 43.0
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 7.3e-16 88.6 162 33.3
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 7.3e-16 88.6 113 42.5
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.5e-16 88.2 99 43.4
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.2e-15 87.8 162 32.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-15 87.4 96 43.8
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 2.1e-15 87.0 162 32.1
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 2.1e-15 87.0 162 32.1
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 2.1e-15 87.0 162 32.1
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.1e-15 87.0 167 32.9
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.8e-15 86.7 168 35.1
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-15 85.9 150 34.0
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 4.7e-15 85.9 173 34.1
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-15 85.9 113 41.6
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.1e-15 85.5 99 43.4
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 6.1e-15 85.5 140 32.9
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.0e-14 84.7 113 41.6
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-14 84.0 111 41.4
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-14 83.6 119 38.7
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-14 83.6 99 41.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 5.2e-14 82.4 144 34.7
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.2e-14 82.4 111 38.7
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 1.2e-13 81.3 175 34.3
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.4e-13 79.3 99 42.4
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-13 79.0 98 41.8
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-12 77.8 167 33.5
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 4.9e-12 75.9 93 39.8
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.9e-12 75.9 78 42.3
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.4e-12 75.5 90 41.1
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 8.3e-12 75.1 108 35.2
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.1e-11 74.7 63 50.8
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-11 74.3 158 32.9
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 2.4e-11 73.6 97 35.1
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.0e-11 72.0 76 42.1
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.2e-11 71.6 84 39.3
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 9.2e-11 71.6 74 43.2
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.0e-10 70.5 111 36.0
PGSC0003DMG400045567 Solanum tuberosum HOM05D004064 ORTHO05D037746 1.0e-09 68.2 125 35.2
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-09 67.8 142 34.5
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 1.3e-09 67.8 152 33.6
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.3e-09 67.8 160 28.8
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-09 67.4 95 31.6
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-08 64.3 150 34.7
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-08 63.9 149 29.5
Sopen12g018470 Solanum pennellii HOM05D000017 ORTHO05D009909 1.9e-08 63.9 105 44.8
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.5e-08 63.5 97 36.1
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 2.5e-08 63.5 149 29.5
CAN.G946.2 Capsicum annuum HOM05D000017 ORTHO05D001349 3.3e-08 63.2 133 31.6
Nitab4.5_0009261g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.3e-08 63.2 95 31.6
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 3.3e-08 63.2 95 35.8
Solyc07g019640.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 4.3e-08 62.8 95 36.8
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-08 62.8 149 29.5
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-08 62.8 149 29.5
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-08 62.8 149 29.5
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 4.3e-08 62.8 149 29.5
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 4.3e-08 62.8 95 36.8
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-08 62.8 149 29.5
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-08 62.8 149 29.5
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-08 62.4 149 29.5
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 9.5e-08 61.6 149 28.9
PGSC0003DMG400029014 Solanum tuberosum HOM05D000017 ORTHO05D009909 1.2e-07 61.2 79 40.5
Nitab4.5_0006105g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.8e-07 60.1 95 31.6
Peaxi162Scf01167g00014 Petunia axillaris HOM05D000017 ORTHO05D001349 2.8e-07 60.1 156 29.5
Peaxi162Scf00556g00017 Petunia axillaris HOM05D000017 ORTHO05D009364 3.6e-07 59.7 115 33.9
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.2e-07 58.9 96 34.4
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.2e-07 58.9 96 34.4
Peaxi162Scf00001g04233 Petunia axillaris HOM05D000017 ORTHO05D001349 6.2e-07 58.9 105 29.5
Peaxi162Scf00274g00066 Petunia axillaris HOM05D000017 ORTHO05D001349 6.2e-07 58.9 115 33.9
Peaxi162Scf00290g00112 Petunia axillaris HOM05D000017 ORTHO05D001349 6.2e-07 58.9 105 29.5
Peaxi162Scf00677g00218 Petunia axillaris HOM05D000017 ORTHO05D009364 6.2e-07 58.9 115 33.9
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.0e-07 58.5 95 34.7
Nitab4.5_0009338g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.0e-07 58.5 91 35.2
Peaxi162Scf00043g00613 Petunia axillaris HOM05D000017 ORTHO05D001349 8.0e-07 58.5 115 33.0
Peaxi162Scf00089g00005 Petunia axillaris HOM05D000017 ORTHO05D001349 8.0e-07 58.5 145 27.6
Nitab4.5_0003987g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-06 58.2 132 29.5
CAN.G339.27 Capsicum annuum HOM05D004064 ORTHO05D009909 1.4e-06 57.8 162 32.7
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.4e-06 57.8 96 33.3
Nitab4.5_0004393g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.4e-06 57.8 95 30.5
Nitab4.5_0005309g0020 Nicotiana tabacum HOM05D024655 ORTHO05D025895 1.4e-06 57.8 84 33.3
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.4e-06 57.8 96 34.4
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-06 57.0 89 34.8
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.3e-06 57.0 80 40.0
Peaxi162Scf00562g00023 Petunia axillaris HOM05D000017 ORTHO05D009364 2.3e-06 57.0 148 28.4
Peaxi162Scf00215g00034 Petunia axillaris HOM05D000017 ORTHO05D001349 3.1e-06 56.6 105 29.5
Peaxi162Scf01553g00013 Petunia axillaris HOM05D000017 ORTHO05D001349 3.1e-06 56.6 105 30.5
Nitab4.5_0000944g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.0e-06 56.2 115 30.4
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.0e-06 56.2 94 34.0
Nitab4.5_0001576g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.0e-06 56.2 108 34.3
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.0e-06 56.2 96 33.3
Peaxi162Scf00042g02522 Petunia axillaris HOM05D000017 ORTHO05D001349 4.0e-06 56.2 105 29.5
PGSC0003DMG400036451 Solanum tuberosum HOM05D000017 ORTHO05D013101 4.0e-06 56.2 95 35.8
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.2e-06 55.8 97 33.0
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 6.8e-06 55.5 93 28.0
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-06 55.5 144 29.2
Nitab4.5_0000129g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.8e-06 55.5 127 32.3
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.8e-06 55.5 89 37.1
Peaxi162Scf00039g00213 Petunia axillaris HOM05D000017 ORTHO05D001349 6.8e-06 55.5 108 35.2
Nitab4.5_0000147g0090 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.9e-06 55.1 130 33.1
Nitab4.5_0001068g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.9e-06 55.1 120 29.2
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.9e-06 55.1 96 34.4
Nitab4.5_0003883g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.9e-06 55.1 95 29.5
Nitab4.5_0003998g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.9e-06 55.1 85 32.9
Peaxi162Scf00304g00048 Petunia axillaris HOM05D000017 ORTHO05D001349 8.9e-06 55.1 108 35.2
Rhsim01G0142000 Rhododendron simsii HOM05D009581 ORTHO05D004107 8.9e-06 55.1 102 32.4
PGSC0003DMG400039930 Solanum tuberosum HOM05D000017 ORTHO05D009909 8.9e-06 55.1 80 38.8
SGA_v2.0_scaffold41G15831 Striga asiatica HOM05D000007 ORTHO05D000039 8.9e-06 55.1 95 29.5


User provided reference genes

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