Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401013914 Solanum tuberosum HOM05D006648 ORTHO05D008253 1.0e-116 423.3 202 100.0
Sopen12g013090 Solanum pennellii HOM05D006648 ORTHO05D008253 1.0e-87 327.0 165 93.3
Solyc12g027800.1 Solanum lycopersicum HOM05D006648 ORTHO05D008253 1.1e-86 323.6 165 93.3
CAN.G94.9 Capsicum annuum HOM05D006648 ORTHO05D008253 1.5e-59 233.4 178 70.2
Peaxi162Scf00358g00410 Petunia axillaris HOM05D006648 ORTHO05D008253 2.1e-48 196.4 126 76.2
SGA_v2.0_scaffold164G38119 Striga asiatica HOM05D006648 ORTHO05D008253 3.9e-47 192.2 173 59.0
Migut.D02056 Erythranthe guttata HOM05D006648 ORTHO05D008253 9.6e-46 187.6 117 74.4
Cc04_g08730 Coffea canephora HOM05D006648 ORTHO05D008253 1.6e-45 186.8 161 61.5
unitig_0.g24 Utricularia gibba HOM05D006648 ORTHO05D008253 8.9e-44 181.0 107 72.0
Dinv04104 Davidia involucrata HOM05D006648 ORTHO05D008253 1.2e-43 180.6 143 63.6
Cfa012641 Carpinus fangiana HOM05D006648 ORTHO05D008253 1.3e-42 177.2 99 80.8
SalBow1G6461 Salvia bowleyana HOM05D006648 ORTHO05D008253 1.3e-42 177.2 124 71.0
SGA_v2.0_scaffold110G31173 Striga asiatica HOM05D006648 ORTHO05D008253 1.3e-42 177.2 196 51.5
TWI15G0343 Tripterygium wilfordii HOM05D006648 ORTHO05D008253 1.3e-42 177.2 96 85.4
Haze_08018 Corylus avellana HOM05D006648 ORTHO05D008253 3.8e-42 175.6 104 76.0
Potri.015G029600 Populus trichocarpa HOM05D006648 ORTHO05D008253 6.4e-42 174.9 96 83.3
Nitab4.5_0000011g0060 Nicotiana tabacum HOM05D006648 ORTHO05D008253 1.9e-41 173.3 185 53.5
TAR629G3357 Trochodendron aralioides HOM05D006648 ORTHO05D008253 1.9e-41 173.3 99 75.8
CiPaw.15G092300 Carya illinoinensis HOM05D006648 ORTHO05D008253 2.4e-41 172.9 134 61.9
Lsat_1_v5_gn_0_10520 Lactuca sativa HOM05D006648 ORTHO05D008253 5.4e-41 171.8 141 58.9
Sc12g0007810 Simmondsia chinensis HOM05D006648 ORTHO05D008253 5.4e-41 171.8 101 79.2
CANSAT01G2528 Cannabis sativa HOM05D006648 ORTHO05D008253 7.1e-41 171.4 162 54.3
Manes.02G213372 Manihot esculenta HOM05D006648 ORTHO05D008253 7.1e-41 171.4 120 67.5
Nn4g24907 Nelumbo nucifera HOM05D006648 ORTHO05D008253 7.1e-41 171.4 99 75.8
Actinidia35145 Actinidia chinensis HOM05D006648 ORTHO05D008253 2.1e-40 169.9 108 75.9
ClCG10G015270 Citrullus lanatus HOM05D006648 ORTHO05D008253 3.5e-40 169.1 119 68.9
Thecc.03G074500 Theobroma cacao HOM05D006648 ORTHO05D008253 6.0e-40 168.3 138 60.1
Gohir.D07G067000 Gossypium hirsutum HOM05D006648 ORTHO05D008253 1.0e-39 167.5 128 62.5
Gorai.001G070600 Gossypium raimondii HOM05D006648 ORTHO05D008253 1.0e-39 167.5 128 62.5
Duzib205G0071 Durio zibethinus HOM05D006648 ORTHO05D008253 2.3e-39 166.4 137 59.1
DCAR_014746 Daucus carota HOM05D006648 ORTHO05D008253 3.9e-39 165.6 98 75.5
Sed0021957 Sechium edule HOM05D006648 ORTHO05D008253 3.9e-39 165.6 97 75.3
Aa31LG7G2660 Aethionema arabicum HOM05D006648 ORTHO05D008253 6.6e-39 164.9 127 62.2
Gohir.A07G062400 Gossypium hirsutum HOM05D006648 ORTHO05D008253 6.6e-39 164.9 128 61.7
ATR0618G275 Amborella trichopoda HOM05D006648 ORTHO05D008253 1.1e-38 164.1 100 75.0
MELO3C009853.2 Cucumis melo HOM05D006648 ORTHO05D008253 1.9e-38 163.3 99 74.7
Lalb_Chr05g0221351 Lupinus albus HOM05D006648 ORTHO05D008253 3.3e-38 162.5 99 74.7
arahy.Tifrunner.gnm1.ann1.NPI4TW Arachis hypogaea HOM05D006648 ORTHO05D008253 4.3e-38 162.2 101 73.3
arahy.Tifrunner.gnm1.ann1.WU90Y9 Arachis hypogaea HOM05D006648 ORTHO05D008253 4.3e-38 162.2 101 73.3
Ca_17156_v3 Cicer arietinum L. HOM05D006648 ORTHO05D008253 4.3e-38 162.2 98 75.5
Prupe.5G242000 Prunus persica HOM05D006648 ORTHO05D008253 5.6e-38 161.8 102 74.5
HanXRQChr16g0503321 Helianthus annuus HOM05D006648 ORTHO05D008253 7.3e-38 161.4 128 59.4
Carub.0001s1758 Capsella rubella HOM05D006648 ORTHO05D008253 9.6e-38 161.0 103 73.8
vmacro16390 Vaccinium macrocarpon HOM05D006648 ORTHO05D008253 1.3e-37 160.6 134 59.7
FvH4_5g18210 Fragaria vesca HOM05D006648 ORTHO05D008253 1.6e-37 160.2 106 71.7
FAN04G2085 Fragaria x ananassa HOM05D006648 ORTHO05D008253 1.6e-37 160.2 98 75.5
FAN18G2423 Fragaria x ananassa HOM05D006648 ORTHO05D008253 1.6e-37 160.2 106 71.7
PSO339G3414 Papaver somniferum HOM05D006648 ORTHO05D008253 1.6e-37 160.2 143 55.9
FAN08G0531 Fragaria x ananassa HOM05D006648 ORTHO05D008253 3.6e-37 159.1 98 75.5
FAN13G0169 Fragaria x ananassa HOM05D006648 ORTHO05D008253 3.6e-37 159.1 98 75.5
THA.LOC104810632 Tarenaya hassleriana HOM05D006648 ORTHO05D008253 3.6e-37 159.1 119 67.2
CARHR018460 Cardamine hirsuta HOM05D006648 ORTHO05D008253 4.8e-37 158.7 100 74.0
Lj5A166T76 Lonicera japonica HOM05D006648 ORTHO05D008253 4.8e-37 158.7 127 60.6
Thhalv10007680m.g Eutrema salsugineum HOM05D006648 ORTHO05D008253 8.1e-37 157.9 119 63.9
PSO384G4308 Papaver somniferum HOM05D006648 ORTHO05D008253 8.1e-37 157.9 143 55.9
Psat7g000320 Pisum sativum HOM05D006648 ORTHO05D008253 1.1e-36 157.5 139 55.4
Sabra15G0024800 Salix brachista HOM05D006648 ORTHO05D008253 1.8e-36 156.8 122 63.9
Medtr3g006290 Medicago truncatula HOM05D006648 ORTHO05D008253 2.4e-36 156.4 102 69.6
Sp1g15930 Schrenkiella parvula HOM05D006648 ORTHO05D008253 2.4e-36 156.4 100 73.0
Aqoxy3G00019 Aquilegia oxysepala HOM05D006648 ORTHO05D008253 3.1e-36 156.0 97 75.3
Phvul.002G333400 Phaseolus vulgaris HOM05D006648 ORTHO05D008253 3.1e-36 156.0 102 71.6
Ciclev10020172m.g Citrus clementina HOM05D006648 ORTHO05D008253 4.0e-36 155.6 105 65.7
RcHm_v2.0_Chr7g0177381 Rosa chinensis HOM05D006648 ORTHO05D008253 5.3e-36 155.2 98 72.4
VMungo0251G3035 Vigna mungo HOM05D006648 ORTHO05D008253 9.0e-36 154.5 102 69.6
EL10Ac8g19442 Beta vulgaris HOM05D006648 ORTHO05D008253 1.2e-35 154.1 93 74.2
TPR.G30054 Trifolium pratense HOM05D006648 ORTHO05D008253 2.6e-35 152.9 95 74.7
AT1G17850 Arabidopsis thaliana HOM05D006648 ORTHO05D008253 3.4e-35 152.5 100 72.0
C05p16230 Brassica napus HOM05D006648 ORTHO05D008253 3.4e-35 152.5 100 71.0
BolC5t30325H Brassica oleracea HOM05D006648 ORTHO05D008253 3.4e-35 152.5 100 71.0
BraA06t24532Z Brassica rapa HOM05D006648 ORTHO05D008253 7.6e-35 151.4 105 66.7
Zm00001eb065310 Zea mays HOM05D006648 ORTHO05D008253 9.9e-35 151.0 122 59.8
AL1G30210 Arabidopsis lyrata HOM05D006648 ORTHO05D008253 1.3e-34 150.6 100 71.0
LjContig00484g0018967 Lotus japonicus HOM05D006648 ORTHO05D008253 1.7e-34 150.2 115 62.6
CDE04G0242 Ceratophyllum demersum HOM05D006648 ORTHO05D008253 2.9e-34 149.4 100 69.0
MD14G1244500 Malus domestica HOM05D006648 ORTHO05D008253 2.9e-34 149.4 98 71.4
HPP92_005076 Vanilla planifolia HOM05D006648 ORTHO05D008253 5.4e-33 145.2 100 66.0
Eucgr.H00617 Eucalyptus grandis HOM05D006648 ORTHO05D008253 2.7e-32 142.9 96 67.7
Os03g0861700 Oryza sativa ssp. japonica HOM05D006648 ORTHO05D008253 3.5e-32 142.5 92 68.5
Pp3c17_19320 Physcomitrium patens HOM05D006648 ORTHO05D008253 3.0e-31 139.4 97 62.9
A06p13910 Brassica napus HOM05D006648 ORTHO05D008253 1.9e-30 136.7 131 52.7
Oeu034439.1 Olea europaea HOM05D006648 ORTHO05D008253 5.6e-30 135.2 91 70.3
Mapoly0049s0044 Marchantia polymorpha HOM05D006648 ORTHO05D008253 3.1e-28 129.4 96 61.5
GSVIVG01029375001 Vitis vinifera HOM05D006648 ORTHO05D008253 6.9e-28 128.3 95 63.2
AUR62042217 Chenopodium quinoa HOM05D006648 ORTHO05D008253 9.9e-27 124.4 106 60.4
Gorai.004G017000 Gossypium raimondii HOM05D006648 ORTHO05D008253 9.9e-27 124.4 79 69.6
CBR_g4802 Chara braunii HOM05D006648 ORTHO05D008253 3.8e-26 122.5 96 57.3
Glyma.05G248900 Glycine max HOM05D006648 ORTHO05D008253 5.4e-25 118.6 107 53.3
Gohir.D03G050466 Gossypium hirsutum HOM05D006648 ORTHO05D008253 3.0e-23 112.8 69 71.0
Lj9C349G5 Lonicera japonica HOM05D006648 ORTHO05D008253 3.3e-22 109.4 60 80.0
BcaB07g34009 Brassica carinata HOM05D006648 ORTHO05D008253 5.6e-22 108.6 66 74.2
Rhsim12G0136600 Rhododendron simsii HOM05D006648 ORTHO05D008253 1.5e-19 100.5 260 31.2
Cre06.g304600 Chlamydomonas reinhardtii HOM05D006648 ORTHO05D008253 1.0e-18 97.8 150 34.7
Atru.chr9.364 Acer truncatum HOM05D006648 ORTHO05D008253 2.1e-16 90.1 50 80.0
MBI03_g05121_MAGBIO Magnolia biondii HOM05D006648 ORTHO05D008253 2.1e-16 90.1 49 77.6
MD06G1237700 Malus domestica HOM05D006648 ORTHO05D008253 1.0e-15 87.8 86 53.5
AUR62033067 Chenopodium quinoa HOM05D006648 ORTHO05D008253 2.3e-15 86.7 52 73.1
Cpa.g.sc111.37 Carica papaya HOM05D006648 ORTHO05D008253 3.9e-15 85.9 53 73.6
MCO07G583 Micromonas commoda HOM05D006648 ORTHO05D008253 3.9e-15 85.9 95 41.1
CsaV3_3G041250 Cucumis sativus L. HOM05D006648 ORTHO05D008253 2.5e-14 83.2 50 72.0
ECA232G2150 Erigeron canadensis HOM05D006648 ORTHO05D008253 1.4e-12 77.4 49 69.4
Cpa.g.sc111.39 Carica papaya HOM05D006648 ORTHO05D008253 9.0e-12 74.7 82 51.2
PRCOL_00002504 Prasinoderma coloniale HOM05D006648 ORTHO05D008253 1.2e-11 74.3 102 42.2
GSVIVG01029374001 Vitis vinifera HOM05D006648 ORTHO05D008253 1.1e-06 57.8 37 73.0
Nitab4.5_0021422g0010 Nicotiana tabacum HOM05D006648 ORTHO05D008253 1.5e-06 57.4 28 92.9


User provided reference genes

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