Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401012772 Solanum tuberosum HOM05D000060 ORTHO05D000428 1.3e-54 216.1 105 100.0
Solyc01g091420.2 Solanum lycopersicum HOM05D000060 ORTHO05D000428 2.3e-43 178.7 107 86.0
Sopen01g037180 Solanum pennellii HOM05D000060 ORTHO05D000428 5.0e-38 161.0 109 79.8
Nitab4.5_0000457g0350 Nicotiana tabacum HOM05D000060 ORTHO05D000428 4.7e-36 154.5 106 81.1
Nitab4.5_0007537g0010 Nicotiana tabacum HOM05D000060 ORTHO05D000428 3.0e-35 151.8 103 80.6
Peaxi162Scf00021g01519 Petunia axillaris HOM05D000060 ORTHO05D000428 3.9e-35 151.4 108 76.9
Dinv43719 Davidia involucrata HOM05D000060 ORTHO05D000428 7.5e-26 120.6 108 62.0
Lj9A571T73 Lonicera japonica HOM05D000060 ORTHO05D000428 1.6e-23 112.8 102 58.8
GSVIVG01027621001 Vitis vinifera HOM05D000060 ORTHO05D000428 3.8e-22 108.2 110 58.2
Cc02_g36620 Coffea canephora HOM05D000060 ORTHO05D000428 6.5e-22 107.5 106 57.5
Duzib138G0275 Durio zibethinus HOM05D000060 ORTHO05D000428 1.9e-21 105.9 105 55.2
Hma1.2p1_1663F.1_g296330 Hydrangea macrophylla HOM05D000060 ORTHO05D000428 3.2e-21 105.1 103 55.3
Rhsim07G0027100 Rhododendron simsii HOM05D000060 ORTHO05D000428 1.6e-20 102.8 106 55.7
vmacro13393 Vaccinium macrocarpon HOM05D000060 ORTHO05D000428 1.4e-19 99.8 100 57.0
ClCG06G000340 Citrullus lanatus HOM05D000060 ORTHO05D000428 1.8e-19 99.4 95 57.9
Duzib133G0837 Durio zibethinus HOM05D000060 ORTHO05D000428 1.8e-19 99.4 100 56.0
Hma1.2p1_0660F.1_g197770 Hydrangea macrophylla HOM05D000060 ORTHO05D000428 1.8e-19 99.4 103 51.5
Manes.05G044500 Manihot esculenta HOM05D000060 ORTHO05D000428 2.3e-19 99.0 103 55.3
CiPaw.01G261300 Carya illinoinensis HOM05D000060 ORTHO05D000428 5.2e-19 97.8 109 55.0
COL.COLO4_12557 Corchorus olitorius HOM05D000060 ORTHO05D000428 8.8e-19 97.1 102 54.9
CSS0043669 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000428 2.6e-18 95.5 101 54.5
CSS0046067 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000428 3.4e-18 95.1 101 53.5
Oeu037911.2 Olea europaea HOM05D000060 ORTHO05D000428 3.4e-18 95.1 109 50.5
Cfa001709 Carpinus fangiana HOM05D000060 ORTHO05D000428 4.4e-18 94.7 99 58.6
PGR042G0998 Punica granatum HOM05D000060 ORTHO05D000428 4.4e-18 94.7 107 53.3
Gohir.A08G133900 Gossypium hirsutum HOM05D000060 ORTHO05D000428 7.5e-18 94.0 101 52.5
Gohir.D08G155100 Gossypium hirsutum HOM05D000060 ORTHO05D000428 7.5e-18 94.0 101 52.5
Gorai.004G161100 Gossypium raimondii HOM05D000060 ORTHO05D000428 7.5e-18 94.0 101 52.5
Potri.002G149000 Populus trichocarpa HOM05D000060 ORTHO05D000428 9.8e-18 93.6 101 52.5
DCAR_008562 Daucus carota HOM05D000060 ORTHO05D000428 1.7e-17 92.8 103 52.4
EL10Ac1g00905 Beta vulgaris HOM05D000060 ORTHO05D000428 2.2e-17 92.4 92 55.4
QL08p052181 Quercus lobata HOM05D000060 ORTHO05D000428 3.7e-17 91.7 90 57.8
Actinidia12263 Actinidia chinensis HOM05D000060 ORTHO05D000428 4.8e-17 91.3 106 54.7
Manes.01G265300 Manihot esculenta HOM05D000060 ORTHO05D000428 6.3e-17 90.9 108 51.9
MELO3C000192.2 Cucumis melo HOM05D000060 ORTHO05D000428 1.1e-16 90.1 95 55.8
CsaV3_6G006130 Cucumis sativus L. HOM05D000060 ORTHO05D000428 1.1e-16 90.1 95 55.8
Sabra02G0117800 Salix brachista HOM05D000060 ORTHO05D000428 1.1e-16 90.1 101 52.5
DCAR_006869 Daucus carota HOM05D000060 ORTHO05D000428 1.8e-16 89.4 114 50.9
Potri.014G070400 Populus trichocarpa HOM05D000060 ORTHO05D000428 1.8e-16 89.4 103 53.4
TAR636G1803 Trochodendron aralioides HOM05D000060 ORTHO05D000428 4.1e-16 88.2 97 51.5
CANSAT56G0462 Cannabis sativa HOM05D000060 ORTHO05D000428 5.4e-16 87.8 107 47.7
Thecc.01G375200 Theobroma cacao HOM05D000060 ORTHO05D000428 1.2e-15 86.7 95 54.7
Sabra14G0050100 Salix brachista HOM05D000060 ORTHO05D000428 2.7e-15 85.5 103 51.5
Sed0016554 Sechium edule HOM05D000060 ORTHO05D000428 4.5e-15 84.7 101 55.4
Ciclev10021992m.g Citrus clementina HOM05D000060 ORTHO05D000428 7.7e-15 84.0 105 48.6
Lsat_1_v5_gn_3_132740 Lactuca sativa HOM05D000060 ORTHO05D000428 7.7e-15 84.0 104 54.8
CAN.G388.4 Capsicum annuum HOM05D000060 ORTHO05D000428 1.7e-14 82.8 51 82.4
Hund17014 Selenicereus undatus HOM05D000060 ORTHO05D000428 1.7e-14 82.8 98 50.0
Haze_16824 Corylus avellana HOM05D000060 ORTHO05D000428 2.2e-14 82.4 99 52.5
Nn1g01208 Nelumbo nucifera HOM05D000060 ORTHO05D000428 2.2e-14 82.4 106 49.1
Hund27351 Selenicereus undatus HOM05D000060 ORTHO05D000428 3.8e-14 81.6 100 50.0
TWI59G1248 Tripterygium wilfordii HOM05D000060 ORTHO05D000428 6.5e-14 80.9 106 45.3
PSO782G3421 Papaver somniferum HOM05D000060 ORTHO05D000428 1.5e-13 79.7 111 45.0
Atru.chr5.319 Acer truncatum HOM05D000060 ORTHO05D000428 9.5e-13 77.0 98 48.0
Glyma.03G023000 Glycine max HOM05D000060 ORTHO05D000428 9.5e-13 77.0 103 48.5
SGA_v2.0_scaffold95G28898 Striga asiatica HOM05D000060 ORTHO05D000428 9.5e-13 77.0 93 49.5
PSO478G3850 Papaver somniferum HOM05D000060 ORTHO05D000428 1.2e-12 76.6 99 46.5
RcHm_v2.0_Chr1g0350711 Rosa chinensis HOM05D000060 ORTHO05D000428 2.7e-12 75.5 109 46.8
Gohir.A12G101966 Gossypium hirsutum HOM05D000060 ORTHO05D000428 4.7e-12 74.7 88 47.7
Gohir.D12G105100 Gossypium hirsutum HOM05D000060 ORTHO05D000428 4.7e-12 74.7 88 47.7
Gorai.008G114400 Gossypium raimondii HOM05D000060 ORTHO05D000428 4.7e-12 74.7 88 47.7
TWI14G0493 Tripterygium wilfordii HOM05D000060 ORTHO05D000428 8.0e-12 73.9 82 52.4
Sp4g27450 Schrenkiella parvula HOM05D000060 ORTHO05D000428 1.8e-11 72.8 95 45.3
Aqoxy7G00602 Aquilegia oxysepala HOM05D000060 ORTHO05D000428 5.2e-11 71.2 83 49.4
arahy.Tifrunner.gnm1.ann1.4ZP6RH Arachis hypogaea HOM05D000060 ORTHO05D000428 6.8e-11 70.9 105 44.8
Glyma.01G143900 Glycine max HOM05D000060 ORTHO05D000428 8.8e-11 70.5 111 45.0
BcaC02g07094 Brassica carinata HOM05D000060 ORTHO05D000428 1.2e-10 70.1 98 43.9
C04p71550 Brassica napus HOM05D000060 ORTHO05D000428 1.2e-10 70.1 98 43.9
BolC4t28660H Brassica oleracea HOM05D000060 ORTHO05D000428 1.2e-10 70.1 98 43.9
CARHR140610 Cardamine hirsuta HOM05D000060 ORTHO05D000428 1.5e-10 69.7 94 44.7
FvH4_7g11990 Fragaria vesca HOM05D000060 ORTHO05D000428 1.5e-10 69.7 101 46.5
FAN06G2205 Fragaria x ananassa HOM05D000060 ORTHO05D000428 1.5e-10 69.7 101 46.5
FAN06G2546 Fragaria x ananassa HOM05D000060 ORTHO05D000428 1.5e-10 69.7 101 46.5
FAN10G2467 Fragaria x ananassa HOM05D000060 ORTHO05D000428 1.5e-10 69.7 101 46.5
HanXRQChr13g0425201 Helianthus annuus HOM05D000060 ORTHO05D000428 2.0e-10 69.3 104 44.2
FAN10G3335 Fragaria x ananassa HOM05D000060 ORTHO05D000428 2.6e-10 68.9 101 46.5
Glyma.09G268700 Glycine max HOM05D000060 ORTHO05D000428 5.7e-10 67.8 99 43.4
AL4G44590 Arabidopsis lyrata HOM05D000060 ORTHO05D000428 7.5e-10 67.4 96 44.8
Lj3g0018337 Lotus japonicus HOM05D000060 ORTHO05D000428 9.8e-10 67.0 99 45.5
MD02G1202500 Malus domestica HOM05D000060 ORTHO05D000428 1.3e-09 66.6 102 43.1
Prupe.2G146600 Prunus persica HOM05D000060 ORTHO05D000428 2.2e-09 65.9 108 44.4
TPR.G21721 Trifolium pratense HOM05D000060 ORTHO05D000428 2.2e-09 65.9 86 46.5
TAR629G1694 Trochodendron aralioides HOM05D000060 ORTHO05D000428 2.2e-09 65.9 82 47.6
Thhalv10028937m.g Eutrema salsugineum HOM05D000060 ORTHO05D000428 3.7e-09 65.1 80 48.8
SalBow5G5088 Salvia bowleyana HOM05D040324 ORTHO05D000428 6.3e-09 64.3 104 42.3
AT2G45420 Arabidopsis thaliana HOM05D000060 ORTHO05D000428 8.3e-09 63.9 96 43.8
FAN03G1190 Fragaria x ananassa HOM05D000060 ORTHO05D000428 8.3e-09 63.9 101 46.5
SGA_v2.0_scaffold153G37019 Striga asiatica HOM05D000060 ORTHO05D000428 8.3e-09 63.9 98 45.9
Oeu035607.1 Olea europaea HOM05D000060 ORTHO05D000428 1.8e-08 62.8 104 43.3
Sc02g0002540 Simmondsia chinensis HOM05D000060 ORTHO05D000428 1.8e-08 62.8 105 43.8
Eucgr.E01414 Eucalyptus grandis HOM05D000060 ORTHO05D000428 2.4e-08 62.4 102 43.1
Aa31LG1G26930 Aethionema arabicum HOM05D000060 ORTHO05D000428 4.1e-08 61.6 96 43.8
A04p33810 Brassica napus HOM05D000060 ORTHO05D000428 4.1e-08 61.6 94 41.5
BraA04t18842Z Brassica rapa HOM05D000060 ORTHO05D000428 4.1e-08 61.6 94 41.5
FAN01G1441 Fragaria x ananassa HOM05D000060 ORTHO05D000428 5.4e-08 61.2 100 42.0
BcaB02g08982 Brassica carinata HOM05D000060 ORTHO05D000428 7.0e-08 60.8 93 41.9
Medtr8g036085 Medicago truncatula HOM05D000060 ORTHO05D000428 7.0e-08 60.8 94 42.6
Psat4g195200 Pisum sativum HOM05D000060 ORTHO05D000428 9.2e-08 60.5 72 50.0
Zm00001eb398670 Zea mays HOM05D000060 ORTHO05D000428 1.2e-07 60.1 95 44.2
BcaC02g12209 Brassica carinata HOM05D000060 ORTHO05D000428 1.6e-07 59.7 94 42.6
A05p05450 Brassica napus HOM05D000060 ORTHO05D000428 1.6e-07 59.7 94 42.6
C04p06390 Brassica napus HOM05D000060 ORTHO05D000428 1.6e-07 59.7 94 42.6
BolC4t22262H Brassica oleracea HOM05D000060 ORTHO05D000428 1.6e-07 59.7 94 42.6
SalBow5G1683 Salvia bowleyana HOM05D040324 ORTHO05D000428 1.6e-07 59.7 102 41.2
AT4G00220 Arabidopsis thaliana HOM05D000060 ORTHO05D000428 2.0e-07 59.3 78 46.2
HanXRQChr14g0452811 Helianthus annuus HOM05D000060 ORTHO05D000428 2.0e-07 59.3 106 41.5
Sed0004990 Sechium edule HOM05D000060 ORTHO05D000428 2.0e-07 59.3 92 44.6
Glyma.18G221000 Glycine max HOM05D000060 ORTHO05D000428 2.7e-07 58.9 101 43.6
BraA05t19515Z Brassica rapa HOM05D000060 ORTHO05D000428 3.5e-07 58.5 94 41.5
Sp6g00280 Schrenkiella parvula HOM05D000060 ORTHO05D000428 5.9e-07 57.8 80 47.5
Carub.0006s3700 Capsella rubella HOM05D000060 ORTHO05D000428 7.7e-07 57.4 79 48.1
BcaB01g02227 Brassica carinata HOM05D000060 ORTHO05D000428 1.0e-06 57.0 104 42.3
ECA240G2217 Erigeron canadensis HOM05D000528 ORTHO05D000999 1.3e-06 56.6 85 44.7
Medtr7g074990 Medicago truncatula HOM05D000060 ORTHO05D000428 1.7e-06 56.2 112 35.7
Phvul.008G075900 Phaseolus vulgaris HOM05D000060 ORTHO05D000428 2.3e-06 55.8 98 37.8
AL6G53280 Arabidopsis lyrata HOM05D000060 ORTHO05D000428 6.6e-06 54.3 79 45.6


User provided reference genes

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