Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 0.0e+00 1228.8 694 100.0
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 0.0e+00 1126.7 697 93.4
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 0.0e+00 1120.1 695 92.7
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 1.2e-294 1016.1 693 81.8
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.1e-290 1001.1 688 81.5
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.2e-270 936.4 675 80.6
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 3.0e-264 915.2 746 70.1
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 2.0e-196 689.9 674 63.4
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 5.0e-195 685.3 676 60.4
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 2.8e-190 669.5 711 61.6
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 8.3e-190 667.9 706 56.1
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.2e-188 664.1 674 61.9
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 2.1e-185 653.3 683 59.6
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 6.1e-185 651.7 677 57.2
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.0e-184 651.0 691 59.6
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.1e-181 641.0 684 57.9
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 3.2e-181 639.4 679 59.1
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 1.3e-179 634.0 708 58.1
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.7e-179 633.6 702 55.3
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 1.5e-178 630.6 706 53.5
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.6e-177 627.1 706 56.4
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 2.8e-177 626.3 705 56.9
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 8.0e-177 624.8 693 57.6
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.5e-175 620.5 706 55.8
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 4.9e-174 615.5 690 56.2
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.9e-173 613.6 676 56.4
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 2.4e-173 613.2 670 56.6
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 3.2e-173 612.8 709 58.1
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 2.0e-172 610.1 696 53.9
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.0e-172 610.1 683 59.4
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 3.5e-172 609.4 716 58.2
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 1.0e-171 607.8 701 54.4
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.1e-170 604.4 705 56.6
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 5.6e-170 602.1 667 55.5
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 2.1e-169 600.1 708 52.8
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 3.6e-169 599.4 706 55.9
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 7.5e-167 591.7 690 54.8
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.7e-166 590.5 676 56.4
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 3.7e-166 589.3 696 58.5
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 6.4e-166 588.6 699 52.5
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 1.1e-165 587.8 695 52.7
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.2e-165 586.3 680 58.5
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 7.1e-165 585.1 685 54.7
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 1.2e-164 584.3 704 52.3
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 6.0e-164 582.0 697 48.8
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.3e-163 580.9 672 56.4
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.3e-163 580.9 684 52.5
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 3.0e-163 579.7 535 58.9
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 5.1e-163 578.9 673 53.2
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 3.3e-162 576.2 675 56.1
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 4.3e-162 575.9 671 55.1
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 9.5e-162 574.7 687 54.7
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 3.6e-161 572.8 686 53.8
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 1.4e-160 570.9 668 53.1
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 6.8e-160 568.5 700 50.6
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 8.9e-160 568.2 673 51.7
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 1.3e-158 564.3 698 55.4
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 2.4e-157 560.1 723 51.2
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 4.6e-156 555.8 687 50.1
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.3e-155 554.3 704 51.6
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 3.9e-155 552.7 678 54.4
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 6.6e-155 552.0 693 54.4
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 6.6e-155 552.0 675 53.6
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.9e-154 550.4 695 49.5
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.9e-154 550.4 703 53.3
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 1.4e-152 544.3 679 53.2
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 5.2e-152 542.3 674 53.4
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 3.8e-150 536.2 681 49.3
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 3.8e-150 536.2 545 56.1
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 1.4e-149 534.3 571 59.0
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 1.0e-147 528.1 715 48.0
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.6e-145 520.8 669 54.0
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.5e-143 514.2 584 53.8
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.4e-143 513.1 547 55.2
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 5.8e-143 512.3 547 55.0
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 1.3e-142 511.1 689 48.6
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 1.9e-141 507.3 664 50.3
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 3.2e-141 506.5 522 55.9
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 3.3e-138 496.5 687 49.9
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.1e-136 491.5 576 57.3
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 6.9e-136 488.8 726 46.3
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 2.2e-134 483.8 546 50.5
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 8.4e-134 481.9 696 48.3
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 2.4e-133 480.3 550 49.8
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.6e-132 477.6 444 57.0
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 2.7e-132 476.9 539 51.0
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.1e-130 471.5 651 47.8
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 6.2e-129 465.7 529 49.5
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 8.2e-129 465.3 549 49.2
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 1.3e-126 458.0 546 48.2
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 2.5e-125 453.8 519 49.1
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 3.3e-122 443.4 691 44.6
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.6e-121 441.0 596 54.0
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 4.8e-121 439.5 521 49.1
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 1.4e-120 438.0 513 49.3
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 1.4e-120 438.0 513 49.3
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 3.8e-118 429.9 513 49.1
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.1e-108 397.5 472 51.5
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.0e-106 391.0 541 46.2
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.7e-97 361.3 380 50.0
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 3.6e-92 343.6 375 49.3
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 3.7e-89 333.6 690 40.7
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 8.2e-89 332.4 528 40.3
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.8e-88 331.3 635 38.3
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.3e-67 261.2 544 36.6
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 4.4e-66 256.9 305 50.8
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.8e-59 233.0 225 52.0
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 9.5e-53 212.6 479 33.4
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.0e-42 178.3 230 45.7
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.7e-33 148.7 304 34.2
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 5.1e-30 137.1 583 28.0
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 1.9e-21 108.6 169 42.6
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 7.9e-15 86.7 188 62.2
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 5.8e-10 70.5 51 62.7
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 2.7e-07 61.6 100 40.0
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.0e-06 59.7 101 37.6
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 8.7e-06 56.6 141 34.8


User provided reference genes

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