Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401010885 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.7e-46 186.8 96 100.0
PGSC0003DMG400010886 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.9e-37 158.3 95 83.2
Sopen10g029660 Solanum pennellii HOM05D000092 ORTHO05D000042 4.0e-34 147.9 95 77.9
PGSC0003DMG401003025 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.6e-25 118.6 95 66.3
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.4e-24 114.0 95 64.2
Solyc10g054970.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 5.4e-23 110.9 95 62.1
CAN.G1161.9 Capsicum annuum HOM05D000092 ORTHO05D000042 9.2e-23 110.2 95 63.2
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 1.6e-22 109.4 95 62.1
PGSC0003DMG400002820 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.7e-22 108.6 95 62.1
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.5e-22 108.2 95 61.1
Solyc10g054990.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.3e-21 106.3 95 57.9
PGSC0003DMG401017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.5e-20 102.8 95 56.8
PGSC0003DMG402017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.5e-20 102.8 95 56.8
Sopen10g024900 Solanum pennellii HOM05D000092 ORTHO05D000042 7.3e-20 100.5 80 65.0
Sopen02g011670 Solanum pennellii HOM05D000092 ORTHO05D000042 9.5e-20 100.1 95 55.8
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.2e-19 99.8 95 56.8
PGSC0003DMG401008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.8e-19 98.6 94 58.5
Peaxi162Scf00739g00123 Petunia axillaris HOM05D000092 ORTHO05D000042 8.1e-19 97.1 95 53.7
Solyc02g036270.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 8.1e-19 97.1 88 58.0
PGSC0003DMG400018903 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.1e-18 95.1 95 55.8
Peaxi162Scf00003g00479 Petunia axillaris HOM05D000092 ORTHO05D000042 6.8e-18 94.0 95 50.5
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 2.0e-17 92.4 95 49.5
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 3.4e-17 91.7 94 50.0
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 4.4e-17 91.3 95 52.6
CAN.G1161.48 Capsicum annuum HOM05D000092 ORTHO05D000042 5.8e-17 90.9 95 53.7
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 1.3e-16 89.7 95 51.6
PGSC0003DMG401007575 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.4e-16 87.4 95 53.7
Peaxi162Scf00003g04724 Petunia axillaris HOM05D000092 ORTHO05D000042 1.1e-15 86.7 95 50.5
Peaxi162Scf00003g04738 Petunia axillaris HOM05D000092 ORTHO05D000042 1.1e-15 86.7 99 50.5
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 1.4e-15 86.3 95 50.5
Peaxi162Scf00007g00431 Petunia axillaris HOM05D000092 ORTHO05D000042 1.9e-15 85.9 95 49.5
PGSC0003DMG401011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.9e-15 85.9 95 51.6
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.4e-15 85.5 88 51.1
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 3.2e-15 85.1 80 62.5
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 5.4e-15 84.3 95 51.6
PGSC0003DMG400021477 Solanum tuberosum HOM05D000092 ORTHO05D000042 9.2e-15 83.6 80 55.0
Solyc12g016220.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.6e-14 82.8 85 54.1
Sopen10g024930 Solanum pennellii HOM05D000092 ORTHO05D000042 1.6e-14 82.8 80 58.8
Solyc12g044180.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.1e-14 82.4 88 51.1
Peaxi162Scf00000g00843 Petunia axillaris HOM05D000092 ORTHO05D001673 4.6e-14 81.3 81 56.8
PGSC0003DMG400013165 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.7e-13 79.3 73 57.5
Solyc12g044200.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.0e-13 78.6 89 51.7
PGSC0003DMG400010954 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.1e-13 77.8 60 68.3
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 6.6e-13 77.4 95 44.2
CAN.G960.21 Capsicum annuum HOM05D000092 ORTHO05D000042 2.5e-12 75.5 95 42.1
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 4.0e-10 68.2 96 40.6
Nitab4.5_0000358g0090 Nicotiana tabacum HOM05D000092 ORTHO05D000042 8.9e-10 67.0 73 47.9
CAN.G960.37 Capsicum annuum HOM05D000092 ORTHO05D000042 3.4e-09 65.1 91 39.6
Lj5A772G60 Lonicera japonica HOM05D000092 ORTHO05D000042 3.4e-09 65.1 94 35.1
Lj5A774G52 Lonicera japonica HOM05D000092 ORTHO05D000042 5.8e-09 64.3 94 35.1
Lj5A808T14 Lonicera japonica HOM05D000092 ORTHO05D011915 1.3e-08 63.2 95 34.7
Peaxi162Scf00406g00111 Petunia axillaris HOM05D000092 ORTHO05D000042 1.3e-08 63.2 89 36.0
Solyc10g055080.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.7e-08 62.8 52 61.5
Lj5C707G1 Lonicera japonica HOM05D000092 ORTHO05D000042 4.9e-08 61.2 94 31.9
CAN.G313.12 Capsicum annuum HOM05D000092 ORTHO05D000042 8.4e-08 60.5 86 39.5
PGSC0003DMG400016823 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.1e-07 60.1 95 36.8
Rhsim10G0061900 Rhododendron simsii HOM05D000467 ORTHO05D000042 1.4e-07 59.7 89 31.5
Peaxi162Scf00253g00315 Petunia axillaris HOM05D000092 ORTHO05D000042 3.2e-07 58.5 88 44.3
TAR636G0203 Trochodendron aralioides HOM05D000092 ORTHO05D000042 9.3e-07 57.0 70 38.6
Peaxi162Scf00003g05120 Petunia axillaris HOM05D000092 ORTHO05D011915 1.2e-06 56.6 95 29.5
Ciclev10018706m.g Citrus clementina HOM05D000092 ORTHO05D000042 1.6e-06 56.2 87 33.3
Sopen10g029280 Solanum pennellii HOM05D000092 ORTHO05D000042 2.1e-06 55.8 53 56.6
Ciclev10003660m.g Citrus clementina HOM05D000092 ORTHO05D000042 3.5e-06 55.1 87 34.5
Lj4A323T38 Lonicera japonica HOM05D000092 ORTHO05D000042 3.5e-06 55.1 90 31.1
Lj4C326T2 Lonicera japonica HOM05D000092 ORTHO05D000042 6.0e-06 54.3 90 31.1
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 7.8e-06 53.9 87 37.9
RhsimUnG0090700 Rhododendron simsii HOM05D000046 ORTHO05D000042 7.8e-06 53.9 87 31.0
vmacro22065 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 7.8e-06 53.9 89 29.2
vmacro22796 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 7.8e-06 53.9 89 29.2


User provided reference genes

Program Settings