Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 1.1e-20 102.4 53 100.0
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 4.6e-16 87.0 51 86.3
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 1.8e-15 85.1 51 86.3
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.5e-14 82.0 51 82.4
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.7e-13 77.4 51 78.4
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.1e-12 74.3 51 74.5
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 2.2e-10 68.2 51 64.7
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 1.4e-09 65.5 51 62.7
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 5.5e-09 63.5 51 60.8
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 7.1e-09 63.2 51 58.8
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 9.3e-09 62.8 51 60.8
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 2.7e-08 61.2 51 58.8
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 3.5e-08 60.8 45 66.7
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 4.6e-08 60.5 51 60.8
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 6.0e-08 60.1 51 56.9
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 7.9e-08 59.7 51 54.9
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 7.9e-08 59.7 51 56.9
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 7.9e-08 59.7 51 58.8
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.0e-07 59.3 51 54.9
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 1.0e-07 59.3 51 54.9
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.3e-07 58.9 51 58.8
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.8e-07 58.5 51 56.9
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.8e-07 58.5 51 52.9
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 3.9e-07 57.4 51 54.9
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 5.1e-07 57.0 51 56.9
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 6.7e-07 56.6 51 56.9
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 6.7e-07 56.6 51 54.9
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 8.7e-07 56.2 51 56.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.5e-06 55.5 51 54.9
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.9e-06 55.1 51 52.9
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 3.3e-06 54.3 55 52.7
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.3e-06 54.3 51 52.9
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 5.6e-06 53.5 51 58.8
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 7.4e-06 53.1 51 51.0
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 7.4e-06 53.1 48 54.2
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 9.6e-06 52.8 51 52.9
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 9.6e-06 52.8 51 51.0


User provided reference genes

Program Settings