Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401008392 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.3e-154 549.7 279 100.0
Sopen10g035120 Solanum pennellii HOM05D000176 ORTHO05D000106 8.7e-98 360.9 332 62.3
Nitab4.5_0000381g0110 Nicotiana tabacum HOM05D000176 ORTHO05D000106 4.5e-78 295.4 292 58.2
Nitab4.5_0008402g0020 Nicotiana tabacum HOM05D000176 ORTHO05D000106 3.9e-74 282.3 284 57.7
Dinv11360 Davidia involucrata HOM05D000176 ORTHO05D000106 4.5e-38 162.5 292 40.1
Actinidia29034 Actinidia chinensis HOM05D000176 ORTHO05D000106 1.8e-34 150.6 280 35.7
Cpa.g.sc0.116 Carica papaya HOM05D000176 ORTHO05D000106 2.0e-30 137.1 271 34.3
Solyc10g085700.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.3e-28 129.4 245 38.4
Dinv16983 Davidia involucrata HOM05D000176 ORTHO05D000106 8.0e-27 125.2 287 34.8
Peaxi162Scf00146g01211 Petunia axillaris HOM05D000176 ORTHO05D000106 3.1e-26 123.2 271 31.7
TAR633G1092 Trochodendron aralioides HOM05D000176 ORTHO05D000106 3.4e-25 119.8 271 33.6
vmacro20367 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 1.6e-22 110.9 274 32.8
Nitab4.5_0000480g0010 Nicotiana tabacum HOM05D000176 ORTHO05D000106 1.5e-20 104.4 173 37.0
Oeu057985.3 Olea europaea HOM05D000176 ORTHO05D000106 1.5e-20 104.4 313 31.0
Duzib151G0015 Durio zibethinus HOM05D000176 ORTHO05D000106 9.5e-20 101.7 160 35.6
Rhsim05G0230300 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.2e-19 101.3 295 31.2
TWI53G0034 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.6e-19 100.9 287 30.3
COL.COLO4_16369 Corchorus olitorius HOM05D000176 ORTHO05D000106 2.8e-19 100.1 302 30.8
Nn5g26857 Nelumbo nucifera HOM05D000176 ORTHO05D000106 8.1e-19 98.6 248 29.4
Gorai.011G127800 Gossypium raimondii HOM05D000176 ORTHO05D000106 1.4e-18 97.8 79 51.9
Ah.08g209460 Amaranthus hybridus HOM05D000176 ORTHO05D000106 2.3e-18 97.1 95 49.5
PGR004G2764 Punica granatum HOM05D000176 ORTHO05D000106 5.2e-18 95.9 265 33.6
EL10Ac2g02958 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-15 87.8 277 28.9
AUR62006387 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.4e-15 87.8 80 47.5
Hund03714 Selenicereus undatus HOM05D000176 ORTHO05D000106 7.1e-15 85.5 80 50.0
Psat0s305g0040 Pisum sativum HOM05D000176 ORTHO05D000106 2.1e-14 84.0 74 50.0
Aqoxy4G02403 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 4.6e-14 82.8 277 28.5
AUR62029727 Chenopodium quinoa HOM05D000176 ORTHO05D000106 4.6e-14 82.8 96 42.7
DCAR_018649 Daucus carota HOM05D000176 ORTHO05D000106 1.0e-13 81.6 276 27.2
arahy.Tifrunner.gnm1.ann1.T1UFTC Arachis hypogaea HOM05D000176 ORTHO05D000106 1.1e-12 78.2 76 43.4
HanXRQChr06g0181031 Helianthus annuus HOM05D000176 ORTHO05D000106 1.1e-12 78.2 257 28.4
GSVIVG01030186001 Vitis vinifera HOM05D000176 ORTHO05D000106 1.9e-12 77.4 55 60.0
CANSAT35G1276 Cannabis sativa HOM05D000176 ORTHO05D000106 2.5e-12 77.0 100 41.0
Ca_27746_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.3e-12 76.3 245 26.1
arahy.Tifrunner.gnm1.ann1.ULKS2B Arachis hypogaea HOM05D000176 ORTHO05D000106 5.6e-12 75.9 76 42.1
Lj3g0017762 Lotus japonicus HOM05D000176 ORTHO05D000106 5.6e-12 75.9 125 36.8
Lalb_Chr12g0207711 Lupinus albus HOM05D000176 ORTHO05D000106 1.9e-07 60.8 309 23.6
Sc02g0000190 Simmondsia chinensis HOM05D000176 ORTHO05D000106 2.7e-06 57.0 277 26.7
VMungo0331G1567 Vigna mungo HOM05D000176 ORTHO05D000106 3.5e-06 56.6 57 43.9
Lj3A77T33 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-06 56.2 102 41.2


User provided reference genes

Program Settings