Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401006600 Solanum tuberosum HOM05D032728 ORTHO05D007283 6.9e-53 210.3 102 100.0
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 1.6e-25 119.4 55 100.0
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.2e-23 113.2 55 94.5
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 1.2e-23 113.2 55 94.5
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 3.1e-21 105.1 55 85.5
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 7.0e-21 104.0 80 63.8
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.5e-18 96.3 79 59.5
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.1e-17 92.4 66 69.7
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.3e-14 83.2 45 82.2
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 8.6e-11 70.5 46 67.4
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 1.5e-10 69.7 48 66.7
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 3.3e-10 68.6 47 63.8
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 3.3e-10 68.6 46 63.0
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 7.3e-10 67.4 40 72.5
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 9.5e-10 67.0 56 58.9
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 1.6e-09 66.2 44 65.9
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.8e-09 65.5 54 57.4
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 3.6e-09 65.1 31 83.9
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.6e-09 65.1 54 55.6
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 6.2e-09 64.3 46 60.9
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 8.0e-09 63.9 47 63.8
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 8.0e-09 63.9 57 52.6
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 1.4e-08 63.2 31 83.9
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 1.8e-08 62.8 52 55.8
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 4.0e-08 61.6 42 59.5
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 6.8e-08 60.8 79 45.6
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.5e-07 59.7 87 39.1
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 2.0e-07 59.3 61 44.3
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 2.6e-07 58.9 54 57.4
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 2.6e-07 58.9 57 50.9
PGSC0003DMG400031463 Solanum tuberosum HOM05D032728 ORTHO05D398517 3.4e-07 58.5 36 86.1
PGSC0003DMG400035131 Solanum tuberosum HOM05D032728 ORTHO05D395495 4.4e-07 58.2 36 83.3
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 7.5e-07 57.4 32 71.9
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 9.8e-07 57.0 43 58.1
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 9.8e-07 57.0 48 52.1
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 1.3e-06 56.6 48 56.2
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.9e-06 55.5 59 49.2
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 3.7e-06 55.1 47 59.6
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 3.7e-06 55.1 44 56.8
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 3.7e-06 55.1 44 56.8
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 3.7e-06 55.1 44 56.8
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 4.9e-06 54.7 86 37.2
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 6.4e-06 54.3 48 54.2
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 6.4e-06 54.3 56 48.2
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 8.3e-06 53.9 47 57.4


User provided reference genes

Program Settings