Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401003864 Solanum tuberosum HOM05D007148 ORTHO05D009047 2.6e-164 582.0 306 100.0
Sopen09g003080 Solanum pennellii HOM05D007148 ORTHO05D009047 1.3e-123 446.8 283 86.9
Solyc09g008260.3 Solanum lycopersicum HOM05D007148 ORTHO05D009047 1.8e-120 436.4 283 84.8
CAN.G900.26 Capsicum annuum HOM05D007148 ORTHO05D009047 2.9e-110 402.5 318 71.7
Nitab4.5_0000578g0130 Nicotiana tabacum HOM05D007148 ORTHO05D009047 1.3e-94 350.5 282 73.8
Nitab4.5_0008624g0020 Nicotiana tabacum HOM05D007148 ORTHO05D009047 1.3e-94 350.5 292 70.9
Peaxi162Scf00847g00313 Petunia axillaris HOM05D007148 ORTHO05D009047 1.2e-76 290.8 358 54.7
GSVIVG01033649001 Vitis vinifera HOM05D007148 ORTHO05D009047 3.0e-35 153.3 304 40.1
Oeu053686.1 Olea europaea HOM05D007148 ORTHO05D009047 1.1e-32 144.8 294 38.4
HanXRQChr13g0400991 Helianthus annuus HOM05D007148 ORTHO05D009047 1.4e-32 144.4 287 38.3
Gohir.D01G204200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 1.6e-31 141.0 343 35.6
Gohir.A01G213200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 4.5e-31 139.4 339 36.3
CiPaw.09G171600 Carya illinoinensis HOM05D007148 ORTHO05D009047 7.7e-31 138.7 418 32.1
Gorai.002G246600 Gossypium raimondii HOM05D007148 ORTHO05D009047 2.9e-30 136.7 343 35.3
Dinv35791 Davidia involucrata HOM05D007148 ORTHO05D009047 2.1e-28 130.6 301 36.9
DCAR_014515 Daucus carota HOM05D007148 ORTHO05D009047 3.0e-27 126.7 285 38.9
Hund20337 Selenicereus undatus HOM05D007148 ORTHO05D009047 1.5e-26 124.4 353 34.3
Prupe.7G128700 Prunus persica HOM05D007148 ORTHO05D009047 2.0e-26 124.0 248 37.9
Rhsim04G0144100 Rhododendron simsii HOM05D007148 ORTHO05D009047 2.0e-26 124.0 302 39.1
MSTRG.10326 Avicennia marina HOM05D007148 ORTHO05D009047 4.4e-26 122.9 261 40.2
Ca_11512_v3 Cicer arietinum L. HOM05D000261 ORTHO05D009047 2.2e-25 120.6 233 38.2
Cc06_g04310 Coffea canephora HOM05D007148 ORTHO05D009047 6.3e-25 119.0 295 33.9
Duzib093G0361 Durio zibethinus HOM05D007148 ORTHO05D009047 6.3e-25 119.0 354 31.4
COL.COLO4_26948 Corchorus olitorius HOM05D007148 ORTHO05D009047 1.1e-24 118.2 357 31.1
Lsat_1_v5_gn_6_24961 Lactuca sativa HOM05D007148 ORTHO05D009047 2.4e-24 117.1 283 35.3
TAR633G2546 Trochodendron aralioides HOM05D007148 ORTHO05D009047 2.4e-24 117.1 305 34.8
SalBow3G0477 Salvia bowleyana HOM05D007148 ORTHO05D009047 2.7e-23 113.6 285 36.1
CSS0013124 Camellia sinensis var. sinensis HOM05D007148 ORTHO05D009047 4.5e-23 112.8 247 35.6
Phvul.007G147800 Phaseolus vulgaris HOM05D007148 ORTHO05D009047 4.5e-23 112.8 233 38.2
FvH4_6g16490 Fragaria vesca HOM05D007148 ORTHO05D009047 1.0e-22 111.7 231 39.0
ATR1126G054 Amborella trichopoda HOM05D007148 ORTHO05D009047 1.1e-21 108.2 309 34.6
FAN14G3336 Fragaria x ananassa HOM05D007148 ORTHO05D009047 1.1e-21 108.2 241 37.8
arahy.Tifrunner.gnm1.ann1.IRYX6E Arachis hypogaea HOM05D007148 ORTHO05D009047 1.9e-21 107.5 235 37.4
arahy.Tifrunner.gnm1.ann1.J3RTVJ Arachis hypogaea HOM05D007148 ORTHO05D009047 1.9e-21 107.5 235 37.4
Nn6g35277 Nelumbo nucifera HOM05D007148 ORTHO05D009047 4.2e-21 106.3 240 36.7
Glyma.10G054600 Glycine max HOM05D007148 ORTHO05D009047 5.5e-21 105.9 234 35.9
FAN09G1323 Fragaria x ananassa HOM05D007148 ORTHO05D009047 1.2e-20 104.8 231 37.7
CsaV3_6G039960 Cucumis sativus L. HOM05D007148 ORTHO05D009047 1.6e-20 104.4 264 34.1
FAN05G4699 Fragaria x ananassa HOM05D007148 ORTHO05D009047 2.1e-20 104.0 231 38.1
FAN05G5619 Fragaria x ananassa HOM05D007148 ORTHO05D009047 2.7e-20 103.6 231 38.1
Actinidia31326 Actinidia chinensis HOM05D007148 ORTHO05D009047 1.4e-19 101.3 240 36.7
MBI19_g45279_MAGBIO Magnolia biondii HOM05D007148 ORTHO05D009047 1.4e-19 101.3 320 30.9
FAN02G0401 Fragaria x ananassa HOM05D007148 ORTHO05D009047 3.0e-19 100.1 241 33.6
Hma1.2p1_2076F.1_g313310 Hydrangea macrophylla HOM05D007148 ORTHO05D009047 5.2e-19 99.4 180 40.0
CANSAT80G2677 Cannabis sativa HOM05D007148 ORTHO05D009047 1.5e-18 97.8 239 35.6
Ciclev10012080m.g Citrus clementina HOM05D007148 ORTHO05D009047 2.6e-18 97.1 230 36.5
Thecc.05G068300 Theobroma cacao HOM05D007148 ORTHO05D009047 9.8e-18 95.1 299 31.8
Rhsim04G0143400 Rhododendron simsii HOM05D007148 ORTHO05D009047 1.7e-17 94.4 153 46.4
Atru.chr8.1789 Acer truncatum HOM05D007148 ORTHO05D009047 2.2e-17 94.0 218 33.5
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.2e-17 94.0 309 32.4
RcHm_v2.0_Chr3g0470391 Rosa chinensis HOM05D007148 ORTHO05D009047 2.2e-17 94.0 247 33.6
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 4.9e-17 92.8 291 32.6
Sed0015836 Sechium edule HOM05D007148 ORTHO05D009047 4.1e-16 89.7 267 32.6
Duzib128G0502 Durio zibethinus HOM05D007148 ORTHO05D009047 9.1e-16 88.6 317 29.3
ECA233G5868 Erigeron canadensis HOM05D007148 ORTHO05D009047 1.2e-15 88.2 238 33.2
Ah.08g211560 Amaranthus hybridus HOM05D007148 ORTHO05D009047 2.0e-15 87.4 298 30.2
Lalb_Chr02g0155781 Lupinus albus HOM05D007148 ORTHO05D009047 2.0e-15 87.4 252 31.0
ClCG04G009380 Citrullus lanatus HOM05D007148 ORTHO05D009047 4.5e-15 86.3 273 31.1
Lj5g0011331 Lotus japonicus HOM05D007148 ORTHO05D009047 7.7e-15 85.5 236 30.9
MD12G1110100 Malus domestica HOM05D007148 ORTHO05D009047 1.3e-14 84.7 246 32.9
MD04G1092300 Malus domestica HOM05D007148 ORTHO05D009047 1.7e-14 84.3 234 31.6
MELO3C024473.2 Cucumis melo HOM05D007148 ORTHO05D009047 3.8e-14 83.2 268 31.3
VMungo0720G1794 Vigna mungo HOM05D007148 ORTHO05D009047 8.6e-14 82.0 238 33.6
Aa31LG1G21730 Aethionema arabicum HOM05D007148 ORTHO05D009047 1.5e-13 81.3 216 33.8
AUR62026914 Chenopodium quinoa HOM05D007148 ORTHO05D009047 7.2e-13 79.0 298 28.2
Aqoxy2G01740 Aquilegia oxysepala HOM05D007148 ORTHO05D009047 1.6e-12 77.8 296 28.0
Potri.006G123300 Populus trichocarpa HOM05D007148 ORTHO05D009047 2.1e-12 77.4 244 34.0
PSO801G0196 Papaver somniferum HOM05D007148 ORTHO05D009047 2.8e-12 77.0 210 35.2
Sc20g0005580 Simmondsia chinensis HOM05D007148 ORTHO05D009047 3.6e-12 76.6 268 29.5
Sabra06G0097500 Salix brachista HOM05D001037 ORTHO05D000888 1.8e-11 74.3 250 34.0
AUR62042066 Chenopodium quinoa HOM05D007148 ORTHO05D009047 8.9e-11 72.0 293 27.3
PSO339G4391 Papaver somniferum HOM05D007148 ORTHO05D009047 8.9e-11 72.0 195 33.3
vmacro08783 Vaccinium macrocarpon HOM05D007148 ORTHO05D009047 5.7e-10 69.3 141 41.1
Manes.08G011400 Manihot esculenta HOM05D007148 ORTHO05D009047 7.5e-10 68.9 332 25.3
TWI74G0491 Tripterygium wilfordii HOM05D007148 ORTHO05D009047 7.5e-10 68.9 226 28.8
PGR004G2178 Punica granatum HOM05D007148 ORTHO05D009047 9.8e-10 68.6 411 26.5
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.7e-09 67.8 235 31.1
FvH4_3g24282 Fragaria vesca HOM05D007148 ORTHO05D009047 2.9e-09 67.0 59 64.4
vmacro08784 Vaccinium macrocarpon HOM05D007148 ORTHO05D009047 2.9e-09 67.0 212 31.1
Medtr1g063080 Medicago truncatula HOM05D007148 ORTHO05D009047 3.7e-09 66.6 227 31.7
Cpa.g.sc102.25 Carica papaya HOM05D007148 ORTHO05D009047 6.3e-09 65.9 180 32.8
QL07p043079 Quercus lobata HOM05D007148 ORTHO05D009047 1.1e-08 65.1 210 32.4
Migut.J00650 Erythranthe guttata HOM05D007148 ORTHO05D009047 1.4e-08 64.7 125 42.4
Mapoly0046s0027 Marchantia polymorpha HOM05D007148 ORTHO05D009047 1.2e-07 61.6 362 24.0
Thhalv10013433m.g Eutrema salsugineum HOM05D007148 ORTHO05D009047 2.0e-07 60.8 251 27.9
Atru.chr8.1790 Acer truncatum HOM05D007148 ORTHO05D009047 3.5e-07 60.1 132 37.9
TPR.G11276 Trifolium pratense HOM05D007148 ORTHO05D009047 3.5e-07 60.1 227 27.3
BcaC06g32057 Brassica carinata HOM05D002509 ORTHO05D002758 2.3e-06 57.4 238 26.5
Eucgr.A01669 Eucalyptus grandis HOM05D007148 ORTHO05D009047 8.6e-06 55.5 343 25.7


User provided reference genes

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