Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 2.4e-82 308.9 167 100.0
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 2.5e-68 262.3 167 90.4
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 3.3e-68 261.9 167 90.4
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 2.9e-56 222.2 174 76.4
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 1.3e-53 213.4 167 80.2
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 5.1e-53 211.5 175 74.3
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 1.2e-49 200.3 168 74.4
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 1.0e-40 170.6 172 62.8
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 6.1e-38 161.4 165 65.5
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 1.3e-32 143.7 159 62.9
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 6.5e-32 141.4 175 56.6
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 1.9e-31 139.8 168 58.9
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 4.2e-31 138.7 176 56.8
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 4.2e-31 138.7 160 58.8
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 7.2e-31 137.9 153 63.4
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 9.4e-31 137.5 157 57.3
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 1.6e-30 136.7 170 55.9
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 1.6e-30 136.7 171 57.9
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 2.1e-30 136.3 96 81.2
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 2.1e-30 136.3 171 57.9
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 2.7e-30 136.0 156 62.2
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.6e-30 135.6 164 61.0
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 6.1e-30 134.8 132 66.7
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 7.9e-30 134.4 165 62.4
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 7.9e-30 134.4 159 62.3
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 1.0e-29 134.0 165 58.8
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.4e-29 133.7 164 60.4
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 1.4e-29 133.7 164 60.4
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 2.3e-29 132.9 165 57.0
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 5.1e-29 131.7 170 60.0
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 6.7e-29 131.3 107 67.3
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 6.7e-29 131.3 177 57.1
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 8.8e-29 131.0 95 80.0
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 8.8e-29 131.0 104 76.9
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 1.1e-28 130.6 75 84.0
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 1.5e-28 130.2 99 78.8
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 2.0e-28 129.8 164 59.1
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 2.6e-28 129.4 168 57.1
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 2.6e-28 129.4 168 57.1
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 3.3e-28 129.0 96 76.0
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 4.4e-28 128.6 96 76.0
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 4.4e-28 128.6 152 53.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 5.7e-28 128.3 151 57.6
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 7.4e-28 127.9 132 63.6
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 1.3e-27 127.1 95 72.6
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 1.3e-27 127.1 96 76.0
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 1.7e-27 126.7 119 63.0
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 2.2e-27 126.3 132 63.6
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 3.7e-27 125.6 86 77.9
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 4.8e-27 125.2 168 56.5
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 4.8e-27 125.2 131 61.8
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.1e-26 124.0 143 55.9
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 3.1e-26 122.5 97 76.3
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 4.1e-26 122.1 99 75.8
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 4.1e-26 122.1 96 72.9
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 5.3e-26 121.7 168 56.0
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 2.0e-25 119.8 93 74.2
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.6e-25 119.4 111 60.4
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 2.6e-25 119.4 177 54.2
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 4.5e-25 118.6 98 73.5
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 4.5e-25 118.6 98 73.5
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 4.5e-25 118.6 98 73.5
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 4.5e-25 118.6 98 73.5
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 4.5e-25 118.6 98 73.5
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 7.7e-25 117.9 161 55.3
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.3e-24 117.1 130 60.0
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 1.7e-24 116.7 100 70.0
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 1.7e-24 116.7 98 71.4
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 2.2e-24 116.3 100 71.0
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 2.2e-24 116.3 98 72.4
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 2.2e-24 116.3 68 83.8
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 2.9e-24 115.9 143 54.5
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 2.9e-24 115.9 172 51.7
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 3.8e-24 115.5 164 46.3
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.9e-23 113.2 139 55.4
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 9.4e-23 110.9 84 60.7
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 2.1e-22 109.8 96 74.0
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 2.1e-22 109.8 96 74.0
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 4.7e-22 108.6 150 45.3
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 6.1e-22 108.2 83 72.3
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 1.5e-20 103.6 87 70.1
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 2.0e-20 103.2 166 51.2
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 2.6e-20 102.8 152 48.0
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 5.7e-20 101.7 168 39.3
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 9.7e-20 100.9 166 51.8
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 1.7e-19 100.1 87 56.3
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 3.1e-18 95.9 95 61.1
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 4.1e-18 95.5 95 61.1
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.1e-15 87.4 170 48.2
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 4.2e-15 85.5 121 49.6
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 1.4e-13 80.5 130 46.2
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 2.3e-13 79.7 114 50.9
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 3.0e-13 79.3 38 84.2
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 5.2e-13 78.6 113 53.1
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 8.2e-11 71.2 116 48.3
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.4e-10 69.7 85 51.8
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 2.7e-09 66.2 50 66.0
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 1.5e-07 60.5 36 80.6
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 4.2e-07 58.9 106 47.2


User provided reference genes

Program Settings