Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 3.3e-192 674.9 334 100.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 4.4e-189 664.5 334 97.9
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.9e-188 661.8 334 97.9
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.1e-175 619.0 334 89.8
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 6.0e-170 600.9 334 88.9
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.5e-168 595.5 332 88.6
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 7.8e-162 573.9 332 84.9
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.1e-130 469.5 324 71.0
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 6.1e-130 468.0 323 68.7
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 1.0e-129 467.2 314 72.9
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.0e-129 467.2 320 70.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 2.3e-129 466.1 319 69.6
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 8.7e-129 464.2 325 69.8
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 8.7e-129 464.2 319 69.3
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.9e-128 463.0 315 70.2
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 3.3e-128 462.2 324 69.8
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 3.3e-128 462.2 315 69.8
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.3e-128 461.8 319 69.3
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 5.7e-128 461.5 314 71.0
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 5.7e-128 461.5 314 71.0
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 5.7e-128 461.5 318 71.4
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 6.3e-127 458.0 323 68.4
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 6.3e-127 458.0 316 69.6
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 8.2e-127 457.6 314 69.1
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 1.1e-126 457.2 314 69.7
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.4e-126 456.8 315 70.2
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 1.8e-126 456.4 325 68.6
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.1e-126 455.3 314 70.1
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 2.6e-125 452.6 317 68.8
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.6e-125 452.6 320 68.8
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.4e-125 452.2 310 70.0
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.0e-124 450.7 325 68.0
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.7e-124 449.9 321 67.3
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.9e-124 449.1 325 66.5
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.9e-123 446.4 318 67.3
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 2.5e-123 446.0 309 69.6
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.2e-122 443.7 322 68.3
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.6e-122 443.4 318 67.0
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 2.1e-122 443.0 318 66.7
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.7e-122 442.6 318 66.7
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 6.1e-122 441.4 311 69.5
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 7.9e-122 441.0 318 66.7
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.4e-121 440.3 334 65.3
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.4e-121 440.3 318 66.4
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 3.0e-121 439.1 310 68.4
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 1.5e-120 436.8 321 67.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.5e-120 436.8 323 65.9
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 2.5e-120 436.0 321 66.0
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 3.3e-120 435.6 309 66.3
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.3e-119 433.7 319 66.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.3e-119 433.7 319 66.1
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.3e-119 433.7 319 66.1
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.7e-119 433.3 322 66.5
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.2e-119 433.0 323 64.7
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 3.7e-119 432.2 316 63.9
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.1e-118 430.6 309 67.0
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 2.4e-118 429.5 326 62.6
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 3.1e-118 429.1 309 66.3
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 5.3e-118 428.3 318 65.4
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 9.1e-118 427.6 321 65.4
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 1.2e-117 427.2 328 63.7
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 2.6e-117 426.0 346 62.7
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 7.7e-117 424.5 323 63.8
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.7e-116 423.3 298 68.1
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.7e-116 423.3 330 61.5
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.8e-116 422.2 317 65.6
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 8.5e-116 421.0 321 63.9
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.4e-115 420.2 314 64.6
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 3.2e-115 419.1 288 68.1
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.2e-114 417.2 310 61.9
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 2.1e-114 416.4 318 64.8
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.4e-113 413.7 318 61.9
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.4e-113 413.7 323 63.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 8.8e-113 411.0 272 73.2
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 3.3e-112 409.1 319 59.9
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 4.4e-112 408.7 345 60.3
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 4.4e-112 408.7 290 68.6
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 7.4e-112 407.9 334 59.0
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 1.3e-111 407.1 268 73.5
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 7.0e-110 401.4 318 64.5
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.5e-109 399.1 314 62.7
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.5e-107 393.7 287 66.6
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 3.7e-103 379.0 321 59.2
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 3.1e-102 375.9 329 58.7
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 5.2e-97 358.6 254 69.3
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 3.4e-96 355.9 250 68.8
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 9.8e-96 354.4 234 74.4
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.7e-95 352.4 322 59.3
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 7.2e-91 338.2 317 52.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 9.4e-91 337.8 310 54.5
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 8.0e-90 334.7 325 54.2
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.2e-89 332.0 314 54.5
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.8e-86 323.6 315 51.7
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.4e-86 323.2 308 52.6
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.5e-83 311.2 316 47.8
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 2.8e-82 309.7 318 48.1
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 2.8e-82 309.7 318 48.1
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.4e-78 297.4 222 63.1
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-77 293.9 308 47.7
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.3e-76 290.8 257 53.7
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.0e-76 289.7 317 45.4
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-75 287.0 323 45.5
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.2e-74 284.3 311 45.3
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 8.0e-74 281.6 316 44.3
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 4.0e-73 279.3 326 43.3
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.1e-67 261.2 324 45.4
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 9.8e-64 248.1 312 44.9
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 4.4e-56 222.6 213 52.1
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.3e-34 151.4 160 50.6
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.9e-27 127.5 110 57.3
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.4e-22 111.3 119 50.4
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 2.2e-07 60.8 40 67.5


User provided reference genes

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