Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 8.3e-105 383.6 185 100.0
Solyc12g017690.3 Solanum lycopersicum HOM05D007440 ORTHO05D009418 4.4e-98 361.3 179 97.8
Sopen12g008470 Solanum pennellii HOM05D007440 ORTHO05D009418 9.8e-98 360.1 179 97.2
Nitab4.5_0000219g0040 Nicotiana tabacum HOM05D007440 ORTHO05D009418 9.9e-90 333.6 178 89.9
Oeu061891.1 Olea europaea HOM05D007440 ORTHO05D009418 1.1e-75 287.0 177 75.1
TWI23G1187 Tripterygium wilfordii HOM05D007440 ORTHO05D009418 2.6e-74 282.3 178 74.7
Haze_13927 Corylus avellana HOM05D007440 ORTHO05D009418 4.5e-74 281.6 174 74.1
Cfa008111 Carpinus fangiana HOM05D007440 ORTHO05D009418 7.6e-74 280.8 174 74.7
Cpa.g.sc21.56 Carica papaya HOM05D007440 ORTHO05D009418 2.9e-73 278.9 174 73.6
Thecc.08G172800 Theobroma cacao HOM05D007440 ORTHO05D009418 3.8e-73 278.5 177 72.9
GSVIVG01036437001 Vitis vinifera HOM05D007440 ORTHO05D009418 6.4e-73 277.7 175 74.9
Duzib177G0102 Durio zibethinus HOM05D007440 ORTHO05D009418 8.4e-73 277.3 174 73.0
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 2.4e-72 275.8 174 72.4
Dinv41796 Davidia involucrata HOM05D007440 ORTHO05D009418 7.1e-72 274.2 174 70.7
RcHm_v2.0_Chr7g0224381 Rosa chinensis HOM05D007440 ORTHO05D009418 7.1e-72 274.2 177 70.6
Cc03_g16220 Coffea canephora HOM05D007440 ORTHO05D009418 1.2e-71 273.5 182 71.4
Gorai.009G265700 Gossypium raimondii HOM05D007440 ORTHO05D009418 1.6e-71 273.1 175 74.9
Gohir.D05G254100 Gossypium hirsutum HOM05D007440 ORTHO05D009418 2.7e-71 272.3 175 74.3
QL09p004054 Quercus lobata HOM05D007440 ORTHO05D009418 6.0e-71 271.2 174 70.7
Gohir.A05G252301 Gossypium hirsutum HOM05D007440 ORTHO05D009418 7.9e-71 270.8 175 73.7
COL.COLO4_24615 Corchorus olitorius HOM05D007440 ORTHO05D009418 1.0e-70 270.4 174 73.6
CsaV3_2G033090 Cucumis sativus L. HOM05D007440 ORTHO05D009418 2.3e-70 269.2 178 71.3
Lj9C701T14 Lonicera japonica HOM05D007440 ORTHO05D009418 2.3e-70 269.2 177 72.9
Prupe.1G546900 Prunus persica HOM05D007440 ORTHO05D009418 2.3e-70 269.2 177 70.1
FvH4_5g32910 Fragaria vesca HOM05D007440 ORTHO05D009418 5.1e-70 268.1 177 69.5
SalBow6G1672 Salvia bowleyana HOM05D007440 ORTHO05D009418 8.7e-70 267.3 174 71.8
Hma1.2p1_0708F.1_g207100 Hydrangea macrophylla HOM05D007440 ORTHO05D009418 1.5e-69 266.5 177 68.4
Manes.18G121350 Manihot esculenta HOM05D007440 ORTHO05D009418 1.5e-69 266.5 175 72.6
ClCG11G008830 Citrullus lanatus HOM05D007440 ORTHO05D009418 1.9e-69 266.2 178 69.1
Migut.N03008 Erythranthe guttata HOM05D007440 ORTHO05D009418 1.9e-69 266.2 176 70.5
FAN18G0056 Fragaria x ananassa HOM05D007440 ORTHO05D009418 1.9e-69 266.2 177 68.9
PGR031G3126 Punica granatum HOM05D007440 ORTHO05D009418 2.5e-69 265.8 174 73.0
Actinidia29398 Actinidia chinensis HOM05D007440 ORTHO05D009418 5.6e-69 264.6 178 70.2
CANSAT25G0816 Cannabis sativa HOM05D007440 ORTHO05D009418 5.6e-69 264.6 178 69.7
MELO3C008079.2 Cucumis melo HOM05D007440 ORTHO05D009418 1.3e-68 263.5 178 69.7
Nn1g02997 Nelumbo nucifera HOM05D007440 ORTHO05D009418 1.3e-68 263.5 174 70.1
TAR381G0685 Trochodendron aralioides HOM05D007440 ORTHO05D009418 4.8e-68 261.5 174 67.8
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 3.1e-67 258.8 178 69.7
Sed0012539 Sechium edule HOM05D007440 ORTHO05D009418 5.3e-67 258.1 178 69.7
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 6.9e-67 257.7 177 71.8
CSS0010463 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 9.0e-67 257.3 181 67.4
CSS0017361 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 9.0e-67 257.3 181 67.4
PSO782G5381 Papaver somniferum HOM05D007440 ORTHO05D009418 1.5e-66 256.5 176 67.6
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 2.0e-66 256.1 176 67.0
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 1.7e-65 253.1 174 69.5
arahy.Tifrunner.gnm1.ann1.E07HZ8 Arachis hypogaea HOM05D007440 ORTHO05D009418 6.4e-65 251.1 176 68.8
arahy.Tifrunner.gnm1.ann1.YQ4984 Arachis hypogaea HOM05D007440 ORTHO05D009418 6.4e-65 251.1 176 68.8
MD15G1399400 Malus domestica HOM05D007440 ORTHO05D009418 9.3e-64 247.3 177 65.0
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 9.3e-64 247.3 174 67.2
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 1.6e-63 246.5 191 63.9
Glyma.13G000800 Glycine max HOM05D007440 ORTHO05D009418 2.1e-63 246.1 179 65.4
Lj3g0019924 Lotus japonicus HOM05D007440 ORTHO05D009418 3.5e-63 245.4 179 66.5
Phvul.011G216600 Phaseolus vulgaris HOM05D007440 ORTHO05D009418 6.0e-63 244.6 180 63.9
Rhsim02G0174300 Rhododendron simsii HOM05D007440 ORTHO05D009418 1.3e-60 236.9 189 63.0
CDE05G2917 Ceratophyllum demersum HOM05D007440 ORTHO05D009418 2.8e-60 235.7 176 62.5
FAN04G2515 Fragaria x ananassa HOM05D007440 ORTHO05D009418 6.2e-60 234.6 173 63.6
Medtr4g031180 Medicago truncatula HOM05D007440 ORTHO05D009418 2.4e-59 232.6 173 63.6
Psat7g227720 Pisum sativum HOM05D007440 ORTHO05D009418 3.1e-59 232.3 169 64.5
MBI03_g14514_MAGBIO Magnolia biondii HOM05D007440 ORTHO05D009418 4.0e-59 231.9 202 57.4
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 5.3e-59 231.5 180 63.3
SGA_v2.0_scaffold19G08914 Striga asiatica HOM05D007440 ORTHO05D009418 3.4e-58 228.8 230 52.6
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 5.8e-58 228.0 179 61.5
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 5.8e-58 228.0 192 59.9
CAN.G8.40 Capsicum annuum HOM05D007440 ORTHO05D009418 4.9e-57 224.9 114 94.7
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 6.5e-57 224.6 176 63.1
Atru.chr13.2417 Acer truncatum HOM05D007440 ORTHO05D009418 8.4e-57 224.2 160 70.0
TPR.G34135 Trifolium pratense HOM05D007440 ORTHO05D009418 1.4e-56 223.4 172 62.2
Hund26630 Selenicereus undatus HOM05D007440 ORTHO05D009418 2.3e-54 216.1 179 60.3
Nitab4.5_0006566g0010 Nicotiana tabacum HOM05D007440 ORTHO05D009418 3.0e-54 215.7 111 92.8
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 7.4e-53 211.1 175 58.9
HPP92_004660 Vanilla planifolia HOM05D007440 ORTHO05D009418 7.4e-53 211.1 175 60.0
vmacro11039 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 5.3e-51 204.9 189 57.1
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 1.6e-47 193.4 174 58.0
Lalb_Chr17g0336871 Lupinus albus HOM05D007440 ORTHO05D009418 4.1e-43 178.7 186 51.6
Ca_12759_v3 Cicer arietinum L. HOM05D007440 ORTHO05D009418 1.5e-42 176.8 176 51.1
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 2.9e-41 172.6 175 47.4
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 8.5e-41 171.0 164 46.3
Mapoly0046s0064 Marchantia polymorpha HOM05D007440 ORTHO05D009418 1.1e-40 170.6 178 46.6
RcHm_v2.0_Chr7g0230881 Rosa chinensis HOM05D007440 ORTHO05D009418 3.2e-40 169.1 110 67.3
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 2.8e-36 156.0 110 61.8
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 2.8e-36 156.0 111 64.0
Pp3c9_24070 Physcomitrium patens HOM05D007440 ORTHO05D009418 1.4e-35 153.7 181 45.9
Thecc.09G136000 Theobroma cacao HOM05D007440 ORTHO05D009418 1.3e-33 147.1 97 72.2
Eucgr.H00023 Eucalyptus grandis HOM05D007440 ORTHO05D009418 2.9e-33 146.0 90 70.0
Zm00001eb026400 Zea mays HOM05D007440 ORTHO05D009418 3.6e-31 139.0 90 67.8
CBR_g29696 Chara braunii HOM05D007440 ORTHO05D009418 1.7e-28 130.2 174 40.2
FAN08G1847 Fragaria x ananassa HOM05D007440 ORTHO05D009418 1.4e-27 127.1 105 53.3
Thecc.02G308000 Theobroma cacao HOM05D007440 ORTHO05D009418 3.8e-25 119.0 76 72.4
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 2.2e-17 93.2 47 89.4
Cre10.g451000 Chlamydomonas reinhardtii HOM05D007440 ORTHO05D009418 2.4e-11 73.2 182 27.5
Lsat_1_v5_gn_7_9441 Lactuca sativa HOM05D007440 ORTHO05D009418 2.0e-10 70.1 54 57.4
AagrBONN_evm.TU.Sc2ySwM_362.1381 Anthoceros agrestis HOM05D007440 ORTHO05D009418 7.7e-10 68.2 45 55.6
PRCOL_00006364 Prasinoderma coloniale HOM05D007440 ORTHO05D009418 2.5e-08 63.2 164 29.3


User provided reference genes

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