Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400047339 Solanum tuberosum HOM05D000303 ORTHO05D018136 1.4e-57 226.1 115 100.0
PGSC0003DMG400044680 Solanum tuberosum HOM05D000303 ORTHO05D018136 2.8e-18 95.5 93 53.8
PGSC0003DMG400036184 Solanum tuberosum HOM05D000303 ORTHO05D018136 4.8e-18 94.7 88 60.2
Sopen03g013650 Solanum pennellii HOM05D000303 ORTHO05D011911 6.9e-17 90.9 129 44.2
PGSC0003DMG400034936 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.9e-14 82.8 95 52.6
PGSC0003DMG400036951 Solanum tuberosum HOM05D000613 ORTHO05D018136 1.6e-13 79.7 80 51.2
PGSC0003DMG400041329 Solanum tuberosum HOM05D000303 ORTHO05D018136 2.1e-13 79.3 89 51.7
PGSC0003DMG400043307 Solanum tuberosum HOM05D000303 ORTHO05D000977 3.6e-13 78.6 64 65.6
PGSC0003DMG400043709 Solanum tuberosum HOM05D000303 ORTHO05D000570 7.9e-13 77.4 77 54.5
PGSC0003DMG400035396 Solanum tuberosum HOM05D000303 ORTHO05D396857 1.0e-12 77.0 84 52.4
Sopen09g010560 Solanum pennellii HOM05D000303 ORTHO05D011911 1.4e-12 76.6 108 44.4
PGSC0003DMG400042142 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.4e-12 76.6 89 47.2
PGSC0003DMG400034730 Solanum tuberosum HOM05D000303 ORTHO05D018136 2.3e-12 75.9 90 47.8
PGSC0003DMG400039585 Solanum tuberosum HOM05D009815 ORTHO05D013103 2.3e-12 75.9 88 45.5
Sopen10g014010 Solanum pennellii HOM05D000303 ORTHO05D011911 2.0e-11 72.8 82 45.1
PGSC0003DMG400035198 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.3e-11 72.0 71 50.7
PGSC0003DMG400040409 Solanum tuberosum HOM05D000303 ORTHO05D000570 4.3e-11 71.6 106 42.5
PGSC0003DMG400040902 Solanum tuberosum HOM05D000303 ORTHO05D000570 5.7e-11 71.2 93 47.3
PGSC0003DMG400041969 Solanum tuberosum HOM05D000303 ORTHO05D018136 5.7e-11 71.2 87 43.7
PGSC0003DMG400045562 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.2e-10 69.3 78 50.0
PGSC0003DMG400040499 Solanum tuberosum HOM05D000303 ORTHO05D018136 2.8e-10 68.9 100 44.0
PGSC0003DMG400038831 Solanum tuberosum HOM05D000303 ORTHO05D018136 3.7e-10 68.6 90 45.6
PGSC0003DMG400034342 Solanum tuberosum HOM05D000303 ORTHO05D000570 4.8e-10 68.2 84 46.4
PGSC0003DMG400039592 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.8e-09 66.2 89 39.3
PGSC0003DMG400040331 Solanum tuberosum HOM05D000303 ORTHO05D013103 1.8e-09 66.2 89 46.1
Sopen09g013480 Solanum pennellii HOM05D000303 ORTHO05D000034 3.1e-09 65.5 77 45.5
PGSC0003DMG400039353 Solanum tuberosum HOM05D000303 ORTHO05D000570 6.9e-09 64.3 114 40.4
PGSC0003DMG400042515 Solanum tuberosum HOM05D000303 ORTHO05D000570 6.9e-09 64.3 125 34.4
Sopen01g019660 Solanum pennellii HOM05D000303 ORTHO05D011911 1.2e-08 63.5 78 43.6
PGSC0003DMG400044732 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.2e-08 63.5 57 52.6
PGSC0003DMG400044534 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.0e-08 62.8 67 46.3
PGSC0003DMG400034658 Solanum tuberosum HOM05D000303 ORTHO05D010770 2.6e-08 62.4 129 33.3
PGSC0003DMG400042509 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.6e-08 62.4 129 35.7
Sopen01g017920 Solanum pennellii HOM05D000303 ORTHO05D011911 7.7e-08 60.8 121 33.1
PGSC0003DMG400040492 Solanum tuberosum HOM05D000303 ORTHO05D010770 7.7e-08 60.8 77 42.9
Sopen09g012840 Solanum pennellii HOM05D000303 ORTHO05D011911 1.7e-07 59.7 125 31.2
Sopen09g015750 Solanum pennellii HOM05D000303 ORTHO05D013102 2.2e-07 59.3 119 37.0
PGSC0003DMG400037007 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.2e-07 59.3 88 39.8
PGSC0003DMG400035965 Solanum tuberosum HOM05D000303 ORTHO05D013103 2.9e-07 58.9 66 50.0
PGSC0003DMG400043023 Solanum tuberosum HOM05D000303 ORTHO05D010770 5.0e-07 58.2 76 39.5
Sopen09g026200 Solanum pennellii HOM05D000303 ORTHO05D013102 8.5e-07 57.4 112 39.3
PGSC0003DMG400035272 Solanum tuberosum HOM05D000303 ORTHO05D015747 8.5e-07 57.4 108 37.0
PGSC0003DMG400038629 Solanum tuberosum HOM05D000303 ORTHO05D010770 8.5e-07 57.4 74 40.5
PGSC0003DMG400043213 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.1e-06 57.0 87 35.6
PGSC0003DMG400037794 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.9e-06 56.2 67 44.8
PGSC0003DMG400041376 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.9e-06 56.2 55 54.5
Sopen05g025620 Solanum pennellii HOM05D007844 ORTHO05D011078 2.5e-06 55.8 99 38.4
PGSC0003DMG400045662 Solanum tuberosum HOM05D000303 ORTHO05D010770 2.5e-06 55.8 83 34.9
PGSC0003DMG400040324 Solanum tuberosum HOM05D000303 ORTHO05D015747 3.2e-06 55.5 102 36.3
PGSC0003DMG400042120 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.2e-06 55.5 107 36.4
Sopen03g012670 Solanum pennellii HOM05D000303 ORTHO05D030676 4.2e-06 55.1 52 59.6
PGSC0003DMG400044471 Solanum tuberosum HOM05D000303 ORTHO05D000570 4.2e-06 55.1 75 38.7
PGSC0003DMG400042220 Solanum tuberosum HOM05D000303 ORTHO05D000570 5.5e-06 54.7 62 54.8
Sopen08g008200 Solanum pennellii HOM05D000303 ORTHO05D019378 7.2e-06 54.3 75 38.7
Medtr0030s0310 Medicago truncatula HOM05D000303 ORTHO05D022946 9.4e-06 53.9 68 38.2
PGSC0003DMG400039722 Solanum tuberosum HOM05D000303 ORTHO05D000977 9.4e-06 53.9 95 36.8


User provided reference genes

Program Settings