Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-80 302.4 141 100.0
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.6e-76 288.1 140 93.6
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 1.3e-73 279.6 140 91.4
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 1.9e-64 249.2 138 79.7
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 1.3e-62 243.0 139 77.0
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.1e-62 241.1 138 76.8
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-61 240.0 139 77.0
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-57 226.5 139 71.9
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.4e-57 223.8 139 71.9
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.1e-56 220.7 139 71.2
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.0e-54 216.9 139 69.1
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 2.5e-53 212.2 139 66.2
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 3.3e-53 211.8 142 69.7
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-51 206.8 123 75.6
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 5.8e-50 201.1 141 65.2
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 7.6e-50 200.7 139 64.7
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.9e-49 198.7 139 64.0
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.9e-49 198.7 130 67.7
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.3e-48 193.7 135 65.9
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.6e-47 193.0 135 63.7
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-47 192.6 112 78.6
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.5e-47 191.8 140 62.9
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.6e-47 191.4 139 59.0
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 7.6e-42 174.1 130 59.2
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 6.5e-41 171.0 139 54.7
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 2.5e-40 169.1 129 58.9
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.8e-38 162.9 130 55.4
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.2e-34 150.2 130 50.8
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.4e-34 148.7 94 68.1
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.5e-34 148.3 130 50.0
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 8.5e-33 144.1 130 50.0
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.8e-30 136.3 116 54.3
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.5e-29 133.3 135 46.7
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 5.7e-29 131.3 130 44.6
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.4e-26 122.1 136 44.1
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-25 120.2 98 55.1
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 1.7e-25 119.8 128 43.8
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.4e-24 114.0 82 62.2
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 2.7e-23 112.5 114 46.5
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 3.0e-22 109.0 111 43.2
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.9e-22 108.6 140 38.6
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 1.5e-21 106.7 118 44.1
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 5.7e-21 104.8 136 39.0
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.4e-21 104.4 61 80.3
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.7e-20 103.2 125 41.6
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.1e-19 98.6 112 48.2
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.5e-18 95.1 85 50.6
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-17 93.2 114 46.5
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 1.4e-16 90.1 137 36.5
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 3.2e-16 89.0 100 42.0
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.5e-16 88.2 159 36.5
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 1.2e-15 87.0 114 44.7
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 1.6e-15 86.7 128 34.4
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 2.1e-15 86.3 113 31.9
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 6.1e-15 84.7 130 36.9
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 1.4e-14 83.6 171 33.9
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 1.8e-14 83.2 114 44.7
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 7.7e-10 67.8 125 30.4
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 9.4e-08 60.8 98 36.7
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.6e-07 58.9 98 35.7
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 8.0e-07 57.8 101 33.7
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.0e-07 57.8 32 65.6
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.8e-06 56.6 89 31.5
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.2e-06 55.1 86 31.4


User provided reference genes

Program Settings