Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400047073 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.7e-129 466.1 240 100.0
Sopen09g010600 Solanum pennellii HOM05D000006 ORTHO05D010998 1.5e-26 124.0 89 71.9
PGSC0003DMG400034867 Solanum tuberosum HOM05D000303 ORTHO05D000977 2.4e-19 100.1 112 55.4
PGSC0003DMG400042061 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.1e-13 81.3 62 67.7
PGSC0003DMG400039291 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.5e-13 80.9 64 64.1
PGSC0003DMG400045052 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.0e-13 80.5 68 60.3
PGSC0003DMG400035179 Solanum tuberosum HOM05D007664 ORTHO05D398574 3.3e-13 79.7 75 53.3
PGSC0003DMG400035042 Solanum tuberosum HOM05D000303 ORTHO05D000570 4.4e-13 79.3 127 41.7
PGSC0003DMG400035446 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.7e-12 77.4 107 49.5
PGSC0003DMG400043525 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.7e-12 76.3 72 69.4
PGSC0003DMG400008411 Solanum tuberosum HOM05D000303 ORTHO05D000977 6.3e-12 75.5 80 55.0
PGSC0003DMG400044611 Solanum tuberosum HOM05D000303 ORTHO05D000977 8.2e-12 75.1 117 41.0
PGSC0003DMG400037375 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.8e-11 73.9 64 60.9
PGSC0003DMG400046179 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.8e-11 73.9 88 47.7
PGSC0003DMG400039367 Solanum tuberosum HOM05D000303 ORTHO05D012256 3.1e-11 73.2 81 54.3
PGSC0003DMG400043588 Solanum tuberosum HOM05D000303 ORTHO05D010409 4.1e-11 72.8 63 60.3
PGSC0003DMG400038541 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.2e-10 71.2 64 60.9
PGSC0003DMG400039117 Solanum tuberosum HOM05D000303 ORTHO05D026178 1.5e-10 70.9 64 67.2
PGSC0003DMG400046607 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.5e-10 70.9 62 74.2
PGSC0003DMG400039663 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.0e-10 70.5 62 74.2
PGSC0003DMG400037243 Solanum tuberosum HOM05D000303 ORTHO05D010409 2.6e-10 70.1 98 57.1
PGSC0003DMG400043602 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.6e-10 70.1 68 58.8
PGSC0003DMG400044190 Solanum tuberosum HOM05D000303 ORTHO05D010409 2.6e-10 70.1 65 67.7
PGSC0003DMG400045261 Solanum tuberosum HOM05D000303 ORTHO05D010409 2.6e-10 70.1 64 71.9
PGSC0003DMG400037827 Solanum tuberosum HOM05D000303 ORTHO05D000977 5.9e-10 68.9 64 59.4
PGSC0003DMG400041714 Solanum tuberosum HOM05D000303 ORTHO05D000570 5.9e-10 68.9 108 42.6
PGSC0003DMG400043153 Solanum tuberosum HOM05D000303 ORTHO05D010409 5.9e-10 68.9 61 60.7
PGSC0003DMG400046224 Solanum tuberosum HOM05D000303 ORTHO05D010409 7.7e-10 68.6 64 57.8
PGSC0003DMG400044327 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.0e-09 68.2 63 71.4
PGSC0003DMG400011895 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.2e-09 67.0 61 73.8
PGSC0003DMG400041054 Solanum tuberosum HOM05D000303 ORTHO05D000977 2.2e-09 67.0 64 62.5
PGSC0003DMG400042409 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.9e-09 66.6 58 58.6
PGSC0003DMG400043064 Solanum tuberosum HOM05D000303 ORTHO05D000977 3.8e-09 66.2 43 72.1
arahy.Tifrunner.gnm1.ann1.4S7TQS Arachis hypogaea HOM05D000006 ORTHO05D000001 5.0e-09 65.9 146 30.8
PGSC0003DMG400039073 Solanum tuberosum HOM05D000303 ORTHO05D010409 5.0e-09 65.9 67 55.2
PGSC0003DMG400040204 Solanum tuberosum HOM05D000303 ORTHO05D010409 8.5e-09 65.1 63 69.8
PGSC0003DMG400044042 Solanum tuberosum HOM05D000303 ORTHO05D000570 8.5e-09 65.1 58 65.5
PGSC0003DMG400044376 Solanum tuberosum HOM05D000303 ORTHO05D000977 8.5e-09 65.1 64 68.8
Sopen06g015350 Solanum pennellii HOM05D000303 ORTHO05D000977 1.1e-08 64.7 84 46.4
PGSC0003DMG400039580 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.1e-08 64.7 65 55.4
PGSC0003DMG400039359 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.4e-08 64.3 64 68.8
PGSC0003DMG400042291 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.4e-08 64.3 63 57.1
PGSC0003DMG400042608 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.4e-08 64.3 43 72.1
PGSC0003DMG400044203 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.4e-08 64.3 64 57.8
PGSC0003DMG400041289 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.9e-08 63.9 64 54.7
PGSC0003DMG400046982 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.9e-08 63.9 121 38.8
PGSC0003DMG400039165 Solanum tuberosum HOM05D000303 ORTHO05D000977 2.5e-08 63.5 43 72.1
PGSC0003DMG400042177 Solanum tuberosum HOM05D000303 ORTHO05D010409 2.5e-08 63.5 64 54.7
PGSC0003DMG400042228 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.2e-08 63.2 70 48.6
PGSC0003DMG400042762 Solanum tuberosum HOM05D000303 ORTHO05D010409 3.2e-08 63.2 68 58.8
PGSC0003DMG400043922 Solanum tuberosum HOM05D000303 ORTHO05D000977 3.2e-08 63.2 62 51.6
PGSC0003DMG400034568 Solanum tuberosum HOM05D000303 ORTHO05D010409 4.2e-08 62.8 63 55.6
PGSC0003DMG400035992 Solanum tuberosum HOM05D000303 ORTHO05D010409 4.2e-08 62.8 64 57.8
PGSC0003DMG400038095 Solanum tuberosum HOM05D000303 ORTHO05D000570 4.2e-08 62.8 63 66.7
PGSC0003DMG400041668 Solanum tuberosum HOM05D000303 ORTHO05D000977 5.5e-08 62.4 62 67.7
Manes.14G166140 Manihot esculenta HOM05D010003 ORTHO05D000001 7.2e-08 62.0 136 32.4
PGSC0003DMG400005396 Solanum tuberosum HOM05D000303 ORTHO05D010409 7.2e-08 62.0 84 47.6
PGSC0003DMG400035488 Solanum tuberosum HOM05D000303 ORTHO05D000570 7.2e-08 62.0 64 68.8
PGSC0003DMG400037823 Solanum tuberosum HOM05D000303 ORTHO05D010409 7.2e-08 62.0 94 42.6
PGSC0003DMG400041147 Solanum tuberosum HOM05D000303 ORTHO05D000570 9.4e-08 61.6 43 72.1
PGSC0003DMG400042525 Solanum tuberosum HOM05D007862 ORTHO05D003926 9.4e-08 61.6 125 38.4
PGSC0003DMG400046094 Solanum tuberosum HOM05D000303 ORTHO05D000570 9.4e-08 61.6 64 65.6
PGSC0003DMG400037101 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.2e-07 61.2 64 54.7
Sopen03g012750 Solanum pennellii HOM05D000303 ORTHO05D011911 1.6e-07 60.8 81 44.4
PGSC0003DMG400036867 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.6e-07 60.8 61 63.9
PGSC0003DMG400046791 Solanum tuberosum HOM05D000303 ORTHO05D010409 1.6e-07 60.8 63 60.3
Manes.02G125950 Manihot esculenta HOM05D000006 ORTHO05D000001 2.1e-07 60.5 136 32.4
Manes.10G076205 Manihot esculenta HOM05D000006 ORTHO05D000001 2.1e-07 60.5 136 32.4
Manes.15G182401 Manihot esculenta HOM05D000006 ORTHO05D000001 2.1e-07 60.5 136 32.4
Sopen08g010180 Solanum pennellii HOM05D000303 ORTHO05D023163 2.1e-07 60.5 63 54.0
PGSC0003DMG400042964 Solanum tuberosum HOM05D000303 ORTHO05D010409 2.1e-07 60.5 63 57.1
PGSC0003DMG400043169 Solanum tuberosum HOM05D000303 ORTHO05D000570 2.1e-07 60.5 64 53.1
Manes.14G166180 Manihot esculenta HOM05D010003 ORTHO05D000001 2.7e-07 60.1 136 30.9
PGSC0003DMG400041543 Solanum tuberosum HOM05D000303 ORTHO05D010409 2.7e-07 60.1 63 66.7
Medtr0030s0310 Medicago truncatula HOM05D000303 ORTHO05D022946 3.6e-07 59.7 60 51.7
PGSC0003DMG400040344 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.6e-07 59.7 84 46.4
PGSC0003DMG400040545 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.6e-07 59.7 61 68.9
PGSC0003DMG400041180 Solanum tuberosum HOM05D007862 ORTHO05D003926 3.6e-07 59.7 95 48.4
PGSC0003DMG400044700 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.6e-07 59.7 63 57.1
PGSC0003DMG400046606 Solanum tuberosum HOM05D000303 ORTHO05D000977 3.6e-07 59.7 71 57.7
PGSC0003DMG400039468 Solanum tuberosum HOM05D000303 ORTHO05D000977 4.7e-07 59.3 60 50.0
PGSC0003DMG400043021 Solanum tuberosum HOM05D000303 ORTHO05D010409 4.7e-07 59.3 94 44.7
PGSC0003DMG400045685 Solanum tuberosum HOM05D000303 ORTHO05D010409 4.7e-07 59.3 42 69.0
CiPaw.10G102300 Carya illinoinensis HOM05D000006 ORTHO05D000001 6.1e-07 58.9 146 30.8
PGSC0003DMG400039435 Solanum tuberosum HOM05D000303 ORTHO05D000570 6.1e-07 58.9 57 56.1
PGSC0003DMG400034846 Solanum tuberosum HOM05D000303 ORTHO05D000977 8.0e-07 58.5 44 65.9
PGSC0003DMG400035037 Solanum tuberosum HOM05D000303 ORTHO05D010409 8.0e-07 58.5 100 43.0
PGSC0003DMG400037808 Solanum tuberosum HOM05D009555 ORTHO05D394971 8.0e-07 58.5 81 48.1
TWI23G1018 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 8.0e-07 58.5 143 31.5
CiPaw.16G044200 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.0e-06 58.2 146 31.5
PGSC0003DMG400036501 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.0e-06 58.2 56 57.1
PGSC0003DMG400037213 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.0e-06 58.2 62 67.7
PGSC0003DMG400043371 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.0e-06 58.2 62 66.1
PGSC0003DMG400044169 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.0e-06 58.2 42 69.0
PGSC0003DMG400044804 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.0e-06 58.2 63 47.6
PGSC0003DMG400045851 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.0e-06 58.2 69 50.7
PGSC0003DMG400037770 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.4e-06 57.8 63 66.7
PGSC0003DMG400045889 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.4e-06 57.8 92 44.6
PGSC0003DMG400046811 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.4e-06 57.8 86 44.2
PGSC0003DMG400035704 Solanum tuberosum HOM05D000303 ORTHO05D000977 2.3e-06 57.0 85 44.7
PGSC0003DMG400036873 Solanum tuberosum HOM05D007664 ORTHO05D000977 2.3e-06 57.0 43 65.1
PGSC0003DMG400041087 Solanum tuberosum HOM05D000303 ORTHO05D010409 2.3e-06 57.0 63 55.6
Sopen05g023400 Solanum pennellii HOM05D000303 ORTHO05D023163 3.0e-06 56.6 63 55.6
Sopen12g017390 Solanum pennellii HOM05D000006 ORTHO05D000001 3.0e-06 56.6 140 30.7
PGSC0003DMG400034653 Solanum tuberosum HOM05D000303 ORTHO05D010409 3.0e-06 56.6 130 38.5
PGSC0003DMG400035672 Solanum tuberosum HOM05D000303 ORTHO05D010409 3.0e-06 56.6 130 38.5
Sopen05g009690 Solanum pennellii HOM05D000006 ORTHO05D000001 3.9e-06 56.2 158 31.0
PGSC0003DMG400043324 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.9e-06 56.2 42 64.3
Sopen04g016500 Solanum pennellii HOM05D000006 ORTHO05D000695 5.2e-06 55.8 145 29.0
Sopen09g011370 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-06 55.8 127 30.7
Sopen12g021440 Solanum pennellii HOM05D000006 ORTHO05D000001 5.2e-06 55.8 153 29.4
PGSC0003DMG400036787 Solanum tuberosum HOM05D003308 ORTHO05D000977 5.2e-06 55.8 89 51.7
PGSC0003DMG400044622 Solanum tuberosum HOM05D000303 ORTHO05D010409 5.2e-06 55.8 107 41.1
PGSC0003DMG400045220 Solanum tuberosum HOM05D000303 ORTHO05D000570 5.2e-06 55.8 34 70.6
Sopen08g017560 Solanum pennellii HOM05D000303 ORTHO05D019378 6.7e-06 55.5 56 50.0
PGSC0003DMG400037164 Solanum tuberosum HOM05D000303 ORTHO05D010409 6.7e-06 55.5 64 56.2
PGSC0003DMG400041102 Solanum tuberosum HOM05D000303 ORTHO05D395549 6.7e-06 55.5 100 39.0
PGSC0003DMG400047209 Solanum tuberosum HOM05D000303 ORTHO05D000570 6.7e-06 55.5 43 67.4
Sopen05g014050 Solanum pennellii HOM05D000006 ORTHO05D000001 8.8e-06 55.1 155 28.4
Sopen05g028060 Solanum pennellii HOM05D000006 ORTHO05D000001 8.8e-06 55.1 127 31.5
Sopen09g007750 Solanum pennellii HOM05D000006 ORTHO05D000001 8.8e-06 55.1 151 32.5
PGSC0003DMG400040320 Solanum tuberosum HOM05D000303 ORTHO05D000570 8.8e-06 55.1 98 43.9
PGSC0003DMG400041537 Solanum tuberosum HOM05D000303 ORTHO05D000570 8.8e-06 55.1 151 29.8
PGSC0003DMG400045453 Solanum tuberosum HOM05D000303 ORTHO05D000977 8.8e-06 55.1 85 43.5
TWI81G1093 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 8.8e-06 55.1 143 26.6


User provided reference genes

Program Settings