Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400046994 Solanum tuberosum HOM05D000047 ORTHO05D001383 5.6e-95 350.9 174 100.0
PGSC0003DMG400038224 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.3e-39 165.6 173 53.2
PGSC0003DMG400041787 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.2e-36 157.1 173 52.6
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-36 155.6 168 46.4
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 4.5e-36 155.2 168 46.4
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 5.9e-36 154.8 168 46.4
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 5.9e-36 154.8 168 47.0
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-36 154.5 168 46.4
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-36 154.5 168 46.4
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-36 154.5 168 46.4
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-36 154.5 168 46.4
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-36 154.5 168 46.4
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-35 153.7 168 46.4
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-35 153.3 168 45.8
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-35 153.3 168 46.4
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-35 152.9 168 45.8
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-35 152.9 168 45.8
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-35 152.5 168 45.8
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-35 152.5 168 45.8
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 3.8e-35 152.1 168 45.8
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-35 152.1 168 45.8
CAN.G1076.14 Capsicum annuum HOM05D000152 ORTHO05D001383 5.0e-35 151.8 171 46.8
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 6.5e-35 151.4 168 45.8
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 6.5e-35 151.4 168 45.2
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 8.5e-35 151.0 173 46.2
Sopen10g015700 Solanum pennellii HOM05D000047 ORTHO05D001383 8.5e-35 151.0 168 45.2
Sopen11g011000 Solanum pennellii HOM05D000047 ORTHO05D001383 8.5e-35 151.0 168 45.8
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-34 150.6 167 45.5
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-34 150.6 168 45.8
Sopen09g024060 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-34 149.8 168 45.2
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-34 149.4 168 45.2
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-34 149.4 168 44.6
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-34 149.4 168 45.2
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 3.2e-34 149.1 168 45.2
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 3.2e-34 149.1 168 44.6
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 5.5e-34 148.3 168 45.2
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 7.2e-34 147.9 168 44.6
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-33 146.7 168 44.6
PGSC0003DMG400046850 Solanum tuberosum HOM05D000047 ORTHO05D001383 4.7e-33 145.2 173 48.6
Sopen04g018110 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-32 143.3 170 44.7
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-32 142.5 167 43.7
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 5.2e-32 141.7 170 42.4
Sopen03g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 8.8e-32 141.0 167 43.1
PGSC0003DMG400034367 Solanum tuberosum HOM05D000047 ORTHO05D001383 8.8e-32 141.0 104 71.2
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-31 139.4 164 46.3
Sopen02g013290 Solanum pennellii HOM05D000047 ORTHO05D001383 3.4e-31 139.0 96 75.0
PGSC0003DMG400037575 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.8e-29 133.3 132 59.8
Sopen02g002090 Solanum pennellii HOM05D000047 ORTHO05D001383 9.1e-29 131.0 155 44.5
PGSC0003DMG400034544 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.2e-28 130.6 159 42.8
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.0e-28 129.8 174 42.0
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-28 129.8 128 50.8
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 2.7e-28 129.4 173 39.9
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.7e-27 126.7 174 42.0
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-27 126.7 128 50.8
Potri.018G011950 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.3e-27 126.3 174 42.0
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-27 126.3 138 47.1
PGSC0003DMG400001009 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.8e-27 125.6 90 74.4
Sopen05g010090 Solanum pennellii HOM05D000047 ORTHO05D001383 8.6e-27 124.4 169 43.8
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 8.6e-27 124.4 101 57.4
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-26 124.0 152 44.7
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-26 124.0 163 42.9
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-26 123.2 139 43.9
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 3.3e-26 122.5 172 39.5
Sopen02g013890 Solanum pennellii HOM05D000047 ORTHO05D001383 4.2e-26 122.1 151 44.4
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-25 120.6 128 47.7
Sopen02g008820 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-24 116.7 154 40.3
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 3.0e-24 115.9 194 36.6
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 3.0e-24 115.9 194 36.6
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 3.0e-24 115.9 194 36.6
Thecc.01G147000 Theobroma cacao HOM05D000047 ORTHO05D001383 4.0e-24 115.5 172 37.8
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.2e-24 115.2 171 38.0
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.8e-24 114.8 183 35.5
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 8.9e-24 114.4 178 37.6
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 2.0e-23 113.2 194 36.1
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 4.4e-23 112.1 194 36.1
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 4.4e-23 112.1 194 36.1
Hund05696 Selenicereus undatus HOM05D000070 ORTHO05D001383 5.7e-23 111.7 186 36.0
Hund05906 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.7e-23 111.7 186 36.0
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 1.7e-22 110.2 177 40.1
Sopen03g012850 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-22 109.4 156 38.5
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 4.9e-22 108.6 174 38.5
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.9e-22 108.6 172 37.2
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 6.3e-22 108.2 176 37.5
Sed0008905 Sechium edule HOM05D000047 ORTHO05D001383 8.3e-22 107.8 168 33.9
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-21 106.3 180 36.7
ClCG09G014950 Citrullus lanatus HOM05D000047 ORTHO05D001383 7.0e-21 104.8 165 36.4
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 7.0e-21 104.8 91 53.8
PGSC0003DMG400040683 Solanum tuberosum HOM05D000047 ORTHO05D001383 9.2e-21 104.4 78 67.9
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 1.2e-20 104.0 170 35.3
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-20 103.2 135 41.5
FvH4_4g01161 Fragaria vesca HOM05D000047 ORTHO05D001383 2.7e-20 102.8 166 38.0
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.5e-20 102.4 102 47.1
Hund20685 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.5e-20 102.1 180 35.6
Sopen10g020080 Solanum pennellii HOM05D000002 ORTHO05D010949 4.5e-20 102.1 171 35.7
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 5.9e-20 101.7 91 52.7
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-19 100.9 171 35.1
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-19 100.9 82 57.3
Sopen12g017880 Solanum pennellii HOM05D000047 ORTHO05D001383 3.8e-19 99.0 101 50.5
Sopen12g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-18 96.7 131 40.5
FvH4_6g53791 Fragaria vesca HOM05D000047 ORTHO05D001383 4.3e-18 95.5 74 56.8
Hund10359 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.8e-17 92.8 79 53.2
MELO3C021895.2 Cucumis melo HOM05D001244 ORTHO05D001076 3.6e-17 92.4 157 37.6
QL04p080646 Quercus lobata HOM05D000047 ORTHO05D001383 3.6e-17 92.4 171 36.3
CAN.G322.98 Capsicum annuum HOM05D000324 ORTHO05D001014 4.7e-17 92.0 135 41.5
Hund07466 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.1e-17 91.7 174 33.9
ClCG04G003080 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.8e-16 90.1 90 47.8
Hund02117 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.8e-16 90.1 92 47.8
Hund14863 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.8e-16 90.1 166 35.5
PGSC0003DMG400043601 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.0e-16 89.4 96 46.9
Sopen08g014520 Solanum pennellii HOM05D000047 ORTHO05D010949 6.8e-16 88.2 166 32.5
Sopen09g024340 Solanum pennellii HOM05D000047 ORTHO05D001383 4.4e-15 85.5 55 70.9
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 1.3e-14 84.0 155 34.8
PGSC0003DMG400002445 Solanum tuberosum HOM05D000246 ORTHO05D001057 4.9e-14 82.0 60 73.3
Sopen01g024590 Solanum pennellii HOM05D000047 ORTHO05D001383 6.4e-14 81.6 119 39.5
PGSC0003DMG400035721 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.8e-13 80.1 117 37.6
Hund14969 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.1e-13 79.0 84 45.2
FvH4_4g22272 Fragaria vesca HOM05D008419 ORTHO05D008839 5.4e-13 78.6 148 35.1
Sopen04g021440 Solanum pennellii HOM05D000309 ORTHO05D001383 7.0e-13 78.2 119 37.0
Sopen09g026470 Solanum pennellii HOM05D000047 ORTHO05D010949 1.2e-12 77.4 158 31.6
PGSC0003DMG400040056 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.2e-12 77.4 61 65.6
Sopen11g023900 Solanum pennellii HOM05D000047 ORTHO05D001383 7.8e-12 74.7 117 36.8
ClCG02G011500 Citrullus lanatus HOM05D000047 ORTHO05D000044 1.0e-11 74.3 65 52.3
Sopen05g007770 Solanum pennellii HOM05D000047 ORTHO05D001383 5.0e-11 72.0 111 36.9
Sopen09g025040 Solanum pennellii HOM05D000047 ORTHO05D010949 5.0e-11 72.0 159 31.4
ClCG02G008530 Citrullus lanatus HOM05D000047 ORTHO05D001383 6.6e-11 71.6 55 60.0
Sed0016940 Sechium edule HOM05D000047 ORTHO05D001383 6.6e-11 71.6 147 35.4
Sopen01g028390 Solanum pennellii HOM05D000047 ORTHO05D001383 8.6e-11 71.2 113 37.2
Sed0021823 Sechium edule HOM05D010179 ORTHO05D001383 1.1e-10 70.9 121 31.4
Sopen07g010110 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-10 68.9 96 39.6
Hund11047 Selenicereus undatus HOM05D000047 ORTHO05D001383 7.3e-10 68.2 172 30.2
Sed0005898 Sechium edule HOM05D010179 ORTHO05D001383 2.1e-09 66.6 121 31.4
Hund08511 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.1e-09 66.6 69 43.5
FvH4_3g31360 Fragaria vesca HOM05D002894 ORTHO05D002579 2.8e-09 66.2 91 37.4
Gohir.D07G184901 Gossypium hirsutum HOM05D000047 ORTHO05D001383 2.8e-09 66.2 95 38.9
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 2.8e-09 66.2 105 41.0
Sopen11g017180 Solanum pennellii HOM05D000047 ORTHO05D001383 3.6e-09 65.9 96 36.5
Sed0019732 Sechium edule HOM05D020903 ORTHO05D001383 6.2e-09 65.1 126 31.7
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 6.8e-08 61.6 58 51.7
PGSC0003DMG400042901 Solanum tuberosum HOM05D000047 ORTHO05D001383 6.8e-08 61.6 90 45.6
Sopen03g024220 Solanum pennellii HOM05D000047 ORTHO05D001383 8.9e-08 61.2 43 62.8
ClCG03G010450 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.5e-07 60.5 70 42.9
Sopen04g012410 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-07 60.5 92 37.0
Sed0000384 Sechium edule HOM05D010179 ORTHO05D001383 2.6e-07 59.7 121 30.6
Sopen03g017170 Solanum pennellii HOM05D000047 ORTHO05D001383 3.4e-07 59.3 110 33.6
FAN27G2321 Fragaria x ananassa HOM05D008419 ORTHO05D001383 5.8e-07 58.5 127 29.9
Hund18119 Selenicereus undatus HOM05D009315 ORTHO05D008839 9.8e-07 57.8 136 29.4
Sed0016038 Sechium edule HOM05D000047 ORTHO05D001383 2.2e-06 56.6 125 26.4
FAN20G1001 Fragaria x ananassa HOM05D000047 ORTHO05D001383 2.9e-06 56.2 55 49.1
PSO675G4592 Papaver somniferum HOM05D009560 ORTHO05D001383 4.9e-06 55.5 67 40.3
Gohir.D04G055325 Gossypium hirsutum HOM05D000047 ORTHO05D001383 6.4e-06 55.1 109 33.0


User provided reference genes

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