Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 0.0e+00 1118.2 597 100.0
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 0.0e+00 1078.5 598 96.5
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 4.0e-310 1067.4 598 96.0
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.1e-283 979.5 598 84.1
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.4e-283 979.2 608 82.1
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 9.4e-275 949.9 597 81.1
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 5.7e-264 914.1 599 81.5
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 1.6e-229 799.7 610 70.7
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 1.6e-229 799.7 604 72.8
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 6.4e-223 777.7 595 67.4
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.3e-220 769.2 599 68.3
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.5e-219 766.5 592 69.6
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.9e-219 766.1 607 69.2
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 4.7e-218 761.5 595 66.6
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 2.6e-216 755.7 602 66.9
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.7e-213 745.7 604 67.1
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 5.2e-209 731.5 606 65.2
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 6.9e-209 731.1 627 62.7
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 2.6e-208 729.2 598 65.4
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 3.4e-208 728.8 600 64.8
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 3.4e-208 728.8 606 66.3
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 3.8e-207 725.3 595 61.7
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 5.1e-204 714.9 611 63.0
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 1.1e-203 713.8 601 61.1
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.1e-203 713.8 603 61.0
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 9.6e-203 710.7 599 63.6
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 9.0e-201 704.1 596 63.3
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 1.2e-200 703.7 615 58.9
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 2.3e-196 689.5 607 61.9
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 5.1e-196 688.3 631 59.1
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 2.5e-195 686.0 601 59.6
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 3.3e-195 685.6 599 61.6
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 4.3e-195 685.3 610 58.9
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 9.6e-195 684.1 593 60.5
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.3e-194 683.7 608 58.6
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.1e-194 682.9 625 58.2
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 3.7e-194 682.2 612 60.9
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.7e-194 682.2 608 61.2
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 3.7e-194 682.2 617 58.2
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.4e-193 680.2 618 62.3
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.4e-193 680.2 608 58.2
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 6.9e-193 677.9 603 60.7
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 9.0e-193 677.6 612 56.5
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.2e-192 677.2 606 60.9
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 2.4e-190 669.5 617 59.6
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 3.2e-190 669.1 611 59.6
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 7.1e-190 667.9 605 59.2
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 9.3e-190 667.5 511 65.6
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 1.2e-189 667.2 611 59.1
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 2.1e-189 666.4 595 60.8
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 7.9e-189 664.5 608 59.5
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.3e-188 663.7 623 57.0
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 6.7e-188 661.4 492 69.3
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.5e-187 660.2 616 56.8
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.5e-187 660.2 603 57.7
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 4.3e-187 658.7 617 58.0
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 9.6e-187 657.5 587 59.6
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 1.6e-186 656.8 587 58.9
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 8.2e-186 654.4 628 58.9
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.1e-185 654.1 555 61.8
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.4e-185 652.9 640 56.7
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 4.0e-185 652.1 509 63.7
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 6.9e-185 651.4 440 75.5
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 3.4e-184 649.0 616 56.2
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 3.4e-184 649.0 611 58.8
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 4.5e-184 648.7 497 67.4
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 4.5e-184 648.7 612 57.0
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 1.3e-183 647.1 616 57.6
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 1.1e-182 644.0 622 55.8
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.9e-182 643.3 620 57.1
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.5e-182 642.9 601 57.6
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 4.2e-182 642.1 616 55.7
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 4.2e-182 642.1 616 55.7
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 5.5e-182 641.7 607 55.7
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.2e-181 640.6 620 57.4
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 1.6e-181 640.2 619 56.9
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.7e-181 639.4 621 57.2
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 2.7e-181 639.4 621 56.2
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 3.5e-181 639.0 617 55.4
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.0e-180 637.5 500 65.6
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 2.3e-180 636.3 603 54.9
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 8.7e-180 634.4 506 62.8
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 3.3e-179 632.5 499 61.5
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 1.6e-178 630.2 624 55.6
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 1.4e-177 627.1 607 52.2
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 4.1e-177 625.5 604 51.5
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 6.9e-177 624.8 510 64.9
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.2e-176 624.0 476 65.5
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.0e-175 618.6 497 65.8
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 3.0e-172 609.4 562 60.3
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 5.5e-166 588.6 609 53.4
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.5e-160 570.5 624 54.0
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.9e-159 566.2 615 52.5
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 4.0e-148 529.3 534 51.5
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 2.7e-141 506.5 402 59.5
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 1.6e-136 490.7 635 45.2
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 1.0e-135 488.0 490 50.8
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.5e-134 484.2 368 62.2
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 4.9e-130 469.2 495 49.7
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 6.3e-130 468.8 415 61.7
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.6e-107 393.7 337 59.6
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 3.0e-103 380.2 340 62.1
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.8e-85 320.5 464 38.6
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 2.1e-48 198.0 439 35.1
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 3.0e-47 194.1 247 41.3
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 8.8e-47 192.6 450 32.2
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.3e-45 188.7 475 34.3
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 1.4e-39 168.7 299 30.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.7e-31 139.8 92 68.5
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 6.7e-31 139.8 90 68.9
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.4e-28 132.1 87 75.9
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 3.6e-24 117.5 74 68.9
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.2e-19 102.4 80 58.8
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.7e-19 101.3 58 72.4
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 3.5e-19 100.9 232 28.4
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.0e-18 97.1 62 74.2
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.2e-13 81.6 45 77.8
HPP92_015861 Vanilla planifolia HOM05D006614 ORTHO05D008217 9.8e-06 56.2 30 80.0


User provided reference genes

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