Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400046934 Solanum tuberosum HOM05D009591 ORTHO05D000101 6.8e-113 410.6 199 100.0
PGSC0003DMG400026777 Solanum tuberosum HOM05D009591 ORTHO05D000101 7.9e-53 211.1 187 58.8
PGSC0003DMG400041967 Solanum tuberosum HOM05D009591 ORTHO05D000101 1.5e-51 206.8 193 57.5
PGSC0003DMG400047266 Solanum tuberosum HOM05D009591 ORTHO05D000101 2.0e-48 196.4 187 57.8
PGSC0003DMG400025675 Solanum tuberosum HOM05D000171 ORTHO05D000101 2.6e-43 179.5 207 50.2
Nitab4.5_0005154g0110 Nicotiana tabacum HOM05D009591 ORTHO05D000101 3.5e-32 142.5 155 53.5
CAN.G158.31 Capsicum annuum HOM05D009591 ORTHO05D000101 2.2e-31 139.8 156 50.6
CAN.G158.32 Capsicum annuum HOM05D000171 ORTHO05D000101 5.7e-27 125.2 134 49.3
PGSC0003DMG400047325 Solanum tuberosum HOM05D000171 ORTHO05D000101 3.5e-24 115.9 201 35.3
Nitab4.5_0001041g0030 Nicotiana tabacum HOM05D009591 ORTHO05D000101 8.6e-23 111.3 98 58.2
PGSC0003DMG400045426 Solanum tuberosum HOM05D000171 ORTHO05D000101 2.5e-22 109.8 192 35.4
PGSC0003DMG400001445 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.6e-21 107.1 189 37.0
Nitab4.5_0000471g0070 Nicotiana tabacum HOM05D009591 ORTHO05D000101 6.8e-20 101.7 159 38.4
Nitab4.5_0005154g0100 Nicotiana tabacum HOM05D009591 ORTHO05D000101 1.2e-19 100.9 193 37.3
CAN.G1333.14 Capsicum annuum HOM05D022910 ORTHO05D010076 6.4e-18 95.1 196 35.7
PGSC0003DMG400038445 Solanum tuberosum HOM05D000171 ORTHO05D000101 7.8e-16 88.2 203 32.0
CAN.G184.55 Capsicum annuum HOM05D009591 ORTHO05D000101 3.0e-15 86.3 149 32.9
Peaxi162Scf01567g00009 Petunia axillaris HOM05D009591 ORTHO05D000101 3.0e-15 86.3 107 40.2
PGSC0003DMG400043442 Solanum tuberosum HOM05D000171 ORTHO05D000101 3.0e-15 86.3 193 33.7
CAN.G855.62 Capsicum annuum HOM05D009591 ORTHO05D000101 1.6e-13 80.5 128 37.5
Carub.0001s3186 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-12 77.4 158 34.2
CAN.G371.108 Capsicum annuum HOM05D009591 ORTHO05D000101 1.4e-12 77.4 136 38.2
PGSC0003DMG400036653 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.8e-12 77.0 85 50.6
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 4.0e-12 75.9 61 63.9
PGSC0003DMG400023178 Solanum tuberosum HOM05D009591 ORTHO05D000101 6.8e-12 75.1 68 52.9
PGSC0003DMG400017452 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.2e-11 74.3 184 31.5
Aa31LG6G12080 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.4e-11 72.4 199 28.1
Aa31LG6G12150 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.7e-10 70.5 183 28.4
C08p24500 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-10 70.1 195 28.2
AL1G45610 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-09 67.8 179 30.7
A05p25180 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-09 67.8 116 32.8
CARHR147780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.4e-09 67.4 157 32.5
Aa31LG11G6190 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.4e-09 65.5 197 26.9
A04p22560 Brassica napus HOM05D000171 ORTHO05D000101 5.4e-09 65.5 172 27.3
Thhalv10009543m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.4e-09 65.5 149 32.9
Thhalv10019719m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.0e-09 65.1 191 27.2
BcaC05g27918 Brassica carinata HOM05D000171 ORTHO05D000101 9.2e-09 64.7 117 33.3
C05p39240 Brassica napus HOM05D000171 ORTHO05D000101 9.2e-09 64.7 117 33.3
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 9.2e-09 64.7 143 30.8
BolC5t32658H Brassica oleracea HOM05D000171 ORTHO05D000101 9.2e-09 64.7 117 33.3
A05p43010 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-08 64.3 155 29.7
BraA05t23045Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-08 64.3 155 29.7
Aa31LG6G10800 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.6e-08 63.9 211 28.0
BcaC01g05920 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-08 63.5 143 31.5
BcaB03g13759 Brassica carinata HOM05D000171 ORTHO05D000101 2.7e-08 63.2 119 33.6
AL1G45580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.5e-08 62.8 159 27.7
BNapus_Darmor_BZH_scaffold_118p00140 Brassica napus HOM05D000171 ORTHO05D000101 4.6e-08 62.4 147 29.9
Carub.0001s2948 Capsella rubella HOM05D000171 ORTHO05D000101 6.0e-08 62.0 138 30.4
BcaC01g04937 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-08 61.6 174 28.7
BolC3t15534H Brassica oleracea HOM05D000171 ORTHO05D000101 7.8e-08 61.6 174 28.7
Aa31LG11G10090 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.0e-07 61.2 160 30.0
Aa31sc52G30 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.0e-07 61.2 202 29.2
C03p31920 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-07 61.2 174 28.7
Aa31LG6G12090 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.3e-07 60.8 181 28.2
BcaC02g07953 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-07 60.8 173 27.2
A03p26650 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-07 60.5 132 31.1
Thhalv10012180m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-07 60.5 145 29.7
AL1G45270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.3e-07 60.1 213 27.7
Aa31LG6G10630 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.0e-07 59.7 198 27.3
BraA05t21397Z Brassica rapa HOM05D000171 ORTHO05D000101 3.0e-07 59.7 107 29.0
Thhalv10009303m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.0e-07 59.7 193 27.5
Peaxi162Scf00811g00221 Petunia axillaris HOM05D000171 ORTHO05D000101 3.9e-07 59.3 94 34.0
Sp4g14420 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.9e-07 59.3 202 28.2
Manes.11G003000 Manihot esculenta HOM05D000171 ORTHO05D000101 1.1e-06 57.8 189 28.0
BraA04t17999Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-06 57.4 142 30.3
Thhalv10009630m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.5e-06 57.4 193 26.9
AT4G38870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.9e-06 57.0 150 35.3
A04p24820 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-06 57.0 142 30.3
CARHR042940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.9e-06 57.0 201 24.4
Peaxi162Scf00180g00130 Petunia axillaris HOM05D009591 ORTHO05D000101 1.9e-06 57.0 71 39.4
BraA01t04439Z Brassica rapa HOM05D000171 ORTHO05D000101 2.5e-06 56.6 147 28.6
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 2.5e-06 56.6 180 27.8
Aa31LG6G10610 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.3e-06 56.2 201 24.9
Aa31LG4G9200 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.6e-06 55.5 116 34.5
A09p35110 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 55.5 149 28.9
Thhalv10019461m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.6e-06 55.5 177 27.7
AL4G27390 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.3e-06 55.1 151 27.2
Carub.0001s3228 Capsella rubella HOM05D000171 ORTHO05D000101 9.5e-06 54.7 162 27.8
CAN.G1800.2 Capsicum annuum HOM05D009591 ORTHO05D000101 9.5e-06 54.7 66 47.0
Nitab4.5_0004010g0110 Nicotiana tabacum HOM05D009591 ORTHO05D000101 9.5e-06 54.7 73 38.4
PGSC0003DMG400025676 Solanum tuberosum HOM05D000171 ORTHO05D000101 9.5e-06 54.7 42 64.3


User provided reference genes

Program Settings