Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.5e-61 238.0 116 100.0
PGSC0003DMG400042618 Solanum tuberosum HOM05D004064 ORTHO05D009561 7.5e-19 97.4 50 92.0
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.1e-14 83.6 125 39.2
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-13 79.7 67 52.2
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-13 79.0 67 52.2
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.6e-13 78.6 74 52.7
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 3.6e-13 78.6 75 52.0
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-13 78.6 67 52.2
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.1e-13 77.8 119 40.3
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 6.1e-13 77.8 64 53.1
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 8.0e-13 77.4 66 51.5
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 8.0e-13 77.4 67 50.7
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-13 77.4 67 50.7
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 8.0e-13 77.4 67 50.7
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 8.0e-13 77.4 67 50.7
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-13 77.4 67 50.7
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 1.4e-12 76.6 64 51.6
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 1.4e-12 76.6 67 49.3
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 1.4e-12 76.6 68 51.5
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-12 76.3 74 52.7
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 1.8e-12 76.3 67 50.7
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-12 75.9 65 50.8
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-12 75.9 67 50.7
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-12 75.9 67 50.7
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-12 75.9 67 50.7
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.0e-12 75.1 95 44.2
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.0e-12 75.1 64 54.7
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.0e-12 75.1 64 54.7
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 4.0e-12 75.1 64 54.7
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 4.0e-12 75.1 64 54.7
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.0e-12 75.1 92 44.6
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 4.0e-12 75.1 64 51.6
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-12 75.1 64 54.7
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 5.2e-12 74.7 66 50.0
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.8e-12 74.3 64 53.1
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.8e-12 74.3 67 50.7
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.8e-12 73.9 72 51.4
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 8.8e-12 73.9 121 38.0
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.8e-12 73.9 121 38.8
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 8.8e-12 73.9 65 47.7
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 8.8e-12 73.9 125 36.0
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 8.8e-12 73.9 64 53.1
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.2e-11 73.6 64 50.0
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-11 73.6 68 50.0
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-11 73.6 64 54.7
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 1.5e-11 73.2 67 49.3
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 2.0e-11 72.8 61 55.7
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-11 72.8 64 53.1
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-11 72.8 67 52.2
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-11 72.4 64 53.1
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 2.6e-11 72.4 96 44.8
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.6e-11 72.4 104 41.3
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.4e-11 72.0 64 50.0
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 3.4e-11 72.0 64 53.1
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-11 72.0 64 53.1
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 3.4e-11 72.0 64 51.6
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 4.4e-11 71.6 64 50.0
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.4e-11 71.6 67 47.8
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 5.7e-11 71.2 65 44.6
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 5.7e-11 71.2 64 50.0
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 5.7e-11 71.2 64 50.0
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 5.7e-11 71.2 64 50.0
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 5.7e-11 71.2 64 50.0
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-11 71.2 60 55.0
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 5.7e-11 71.2 67 46.3
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 7.5e-11 70.9 61 49.2
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 9.8e-11 70.5 67 46.3
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.3e-10 70.1 64 48.4
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 1.3e-10 70.1 67 46.3
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 1.3e-10 70.1 64 51.6
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 1.7e-10 69.7 64 51.6
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.2e-10 69.3 64 53.1
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.2e-10 69.3 58 56.9
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 2.2e-10 69.3 64 48.4
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.2e-10 69.3 82 43.9
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 2.8e-10 68.9 65 49.2
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 2.8e-10 68.9 64 50.0
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 3.7e-10 68.6 64 48.4
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 4.8e-10 68.2 65 46.2
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 4.8e-10 68.2 84 44.0
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 8.3e-10 67.4 64 50.0
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.1e-09 67.0 67 49.3
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.1e-09 67.0 64 46.9
Nitab4.5_0007593g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.1e-09 67.0 64 48.4
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 1.1e-09 67.0 65 43.1
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.4e-09 66.6 67 50.7
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-09 66.6 120 38.3
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-09 66.2 122 36.1
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-09 66.2 92 39.1
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 2.4e-09 65.9 66 45.5
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.4e-09 65.9 64 51.6
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 2.4e-09 65.9 61 49.2
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 4.1e-09 65.1 65 44.6
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 4.1e-09 65.1 64 43.8
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 4.1e-09 65.1 64 48.4
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 4.1e-09 65.1 68 45.6
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 5.4e-09 64.7 64 48.4
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 5.4e-09 64.7 63 46.0
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 5.4e-09 64.7 108 38.0
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 5.4e-09 64.7 55 47.3
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 9.1e-09 63.9 64 45.3
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 1.2e-08 63.5 75 38.7
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 1.2e-08 63.5 95 35.8
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 1.6e-08 63.2 75 38.7
Sopen10g028660 Solanum pennellii HOM05D004064 ORTHO05D009561 1.6e-08 63.2 92 39.1
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.0e-08 62.8 73 43.8
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-08 62.8 77 45.5
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 2.0e-08 62.8 58 48.3
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 2.7e-08 62.4 65 47.7
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.5e-08 62.0 71 46.5
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 3.5e-08 62.0 64 46.9
Solyc06g007395.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.5e-08 61.6 51 56.9
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.5e-08 61.6 113 32.7
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 7.7e-08 60.8 59 45.8
Nitab4.5_0002244g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.0e-07 60.5 64 45.3
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 1.0e-07 60.5 64 45.3
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 1.3e-07 60.1 53 50.9
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-07 59.7 64 40.6
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.3e-07 59.3 66 45.5
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 2.9e-07 58.9 61 42.6
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 2.9e-07 58.9 83 42.2
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 3.8e-07 58.5 51 52.9
CAN.G2.10 Capsicum annuum HOM05D004064 ORTHO05D009561 5.0e-07 58.2 53 49.1
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 5.0e-07 58.2 61 41.0
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 5.0e-07 58.2 65 38.5
Peaxi162Scf00176g00082 Petunia axillaris HOM05D000800 ORTHO05D000658 6.6e-07 57.8 53 49.1
PGSC0003DMG400029070 Solanum tuberosum HOM05D006921 ORTHO05D009185 6.6e-07 57.8 64 46.9
Sopen04g020440 Solanum pennellii HOM05D000017 ORTHO05D001349 8.6e-07 57.4 50 54.0
Nitab4.5_0000804g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.5e-06 56.6 89 39.3
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 1.5e-06 56.6 75 34.7
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 1.5e-06 56.6 56 39.3
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-06 56.2 70 38.6
PGSC0003DMG400006499 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.9e-06 56.2 62 48.4
Peaxi162Scf00159g00069 Petunia axillaris HOM05D006921 ORTHO05D009185 4.2e-06 55.1 59 44.1
CAN.G456.22 Capsicum annuum HOM05D000017 ORTHO05D009561 5.5e-06 54.7 54 48.1
CAN.G548.9 Capsicum annuum HOM05D004064 ORTHO05D009561 5.5e-06 54.7 51 51.0
Solyc11g017105.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 7.2e-06 54.3 63 39.7
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 9.5e-06 53.9 64 43.8
Peaxi162Scf00579g00618 Petunia axillaris HOM05D006921 ORTHO05D009185 9.5e-06 53.9 59 45.8
Sopen01g015990 Solanum pennellii HOM05D000017 ORTHO05D009185 9.5e-06 53.9 51 49.0
PGSC0003DMG400017333 Solanum tuberosum HOM05D010431 ORTHO05D016891 9.5e-06 53.9 83 38.6


User provided reference genes

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