Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400046725 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.5e-68 263.1 172 100.0
PGSC0003DMG400034995 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.6e-41 171.8 86 90.7
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.7e-38 162.2 132 67.4
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.9e-37 157.9 104 73.1
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.8e-27 125.6 88 67.0
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.2e-26 122.1 89 64.0
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.5e-26 121.7 88 64.8
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.7e-25 119.4 88 64.8
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 2.3e-24 116.3 88 61.4
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.7e-24 114.8 89 62.9
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.9e-23 113.2 88 62.5
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.3e-22 110.5 87 62.1
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 6.3e-22 108.2 89 58.4
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.3e-22 108.2 88 58.0
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-21 107.5 88 59.1
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 1.8e-21 106.7 86 57.0
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 3.1e-21 105.9 88 56.8
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 3.1e-21 105.9 88 58.0
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 4.1e-21 105.5 90 60.0
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 4.1e-21 105.5 90 60.0
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 1.2e-20 104.0 87 58.6
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.4e-20 102.4 88 56.8
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 5.0e-19 98.6 86 52.3
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 3.2e-18 95.9 86 51.2
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.2e-18 94.7 63 66.7
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.6e-17 93.6 102 52.9
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 3.6e-17 92.4 86 51.2
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 2.3e-16 89.7 88 51.1
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 8.8e-16 87.8 103 42.7
Nitab4.5_0011155g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.4e-15 84.7 55 65.5
Peaxi162Scf01233g00008 Petunia axillaris HOM05D007354 ORTHO05D006294 3.7e-14 82.4 77 57.1
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 4.8e-14 82.0 83 44.6
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 1.1e-13 80.9 101 42.6
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 1.8e-13 80.1 38 89.5
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 3.1e-13 79.3 84 48.8
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 3.1e-13 79.3 84 48.8
Nitab4.5_0001173g0080 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-12 77.0 50 66.0
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.4e-12 75.9 89 41.6
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.9e-12 75.1 79 48.1
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.9e-12 75.1 79 48.1
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.3e-11 73.9 80 46.2
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 1.7e-11 73.6 86 45.3
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 8.5e-11 71.2 87 41.4
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.1e-10 70.9 89 40.4
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 1.9e-10 70.1 87 41.4
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.5e-10 69.7 92 43.5
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.5e-10 69.7 102 39.2
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 4.2e-10 68.9 84 41.7
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 4.2e-10 68.9 93 38.7
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.5e-10 68.6 90 41.1
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 1.6e-09 67.0 84 44.0
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 2.7e-09 66.2 83 38.6
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.6e-09 65.9 82 42.7
Nitab4.5_0003906g0070 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.6e-09 65.9 52 63.5
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 3.6e-09 65.9 87 42.5
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 3.6e-09 65.9 86 43.0
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.7e-09 65.5 85 40.0
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 6.1e-09 65.1 87 40.2
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 1.4e-08 63.9 54 53.7
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 2.3e-08 63.2 85 37.6
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 2.3e-08 63.2 79 39.2
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.7e-08 61.6 91 36.3
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 2.0e-07 60.1 95 38.9
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 9.7e-07 57.8 63 44.4
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 9.7e-07 57.8 84 39.3
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.3e-06 57.4 92 43.5
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 1.7e-06 57.0 56 42.9
HanXRQChr13g0408841 Helianthus annuus HOM05D008265 ORTHO05D000440 1.7e-06 57.0 79 39.2
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.7e-06 57.0 86 36.0
QL04p032678 Quercus lobata HOM05D001286 ORTHO05D000440 4.8e-06 55.5 100 33.0
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 6.3e-06 55.1 86 41.9
COL.COLO4_22279 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.2e-06 54.7 101 34.7


User provided reference genes

Program Settings