Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400046233 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.8e-243 844.3 411 100.0
PGSC0003DMG400044464 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.5e-135 486.9 398 64.8
PGSC0003DMG400040302 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.3e-118 430.6 382 58.6
PGSC0003DMG400041796 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.2e-118 429.9 333 66.1
PGSC0003DMG400035421 Solanum tuberosum HOM05D006181 ORTHO05D008560 7.7e-111 404.8 398 55.5
PGSC0003DMG400034812 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.0e-95 352.1 287 65.5
PGSC0003DMG400037122 Solanum tuberosum HOM05D006181 ORTHO05D008560 7.8e-95 351.7 272 65.4
PGSC0003DMG400044819 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.9e-93 347.1 287 62.7
PGSC0003DMG400034477 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.6e-92 344.0 242 66.9
PGSC0003DMG400041198 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.4e-91 340.9 323 56.7
PGSC0003DMG400039879 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.1e-91 339.7 256 70.7
PGSC0003DMG400037463 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.1e-88 331.3 342 50.9
PGSC0003DMG400034752 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.9e-88 330.5 309 57.0
PGSC0003DMG400038650 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.5e-85 318.2 298 57.4
PGSC0003DMG400041726 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.3e-81 307.8 255 61.6
PGSC0003DMG400042836 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.3e-78 297.7 385 44.7
PGSC0003DMG400037331 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.1e-77 294.7 197 73.1
PGSC0003DMG400042065 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-76 291.2 246 63.4
PGSC0003DMG400038632 Solanum tuberosum HOM05D006181 ORTHO05D008560 4.7e-76 289.3 342 49.4
PGSC0003DMG400045581 Solanum tuberosum HOM05D006181 ORTHO05D008560 4.0e-75 286.2 233 64.4
PGSC0003DMG400040811 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.4e-74 283.1 246 61.4
PGSC0003DMG400041153 Solanum tuberosum HOM05D006181 ORTHO05D008560 8.4e-73 278.5 241 62.7
PGSC0003DMG400046421 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.4e-72 276.9 232 60.3
PGSC0003DMG400042581 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-71 274.6 285 51.6
PGSC0003DMG400040801 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.5e-71 273.1 409 39.9
PGSC0003DMG400043340 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.0e-70 270.0 174 78.2
PGSC0003DMG400035628 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.6e-68 264.2 350 43.4
PGSC0003DMG400039746 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.0e-63 245.7 221 60.6
PGSC0003DMG400046445 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.0e-63 245.7 306 46.4
Sopen08g016710 Solanum pennellii HOM05D006181 ORTHO05D008560 3.3e-61 240.0 398 38.9
PGSC0003DMG400047047 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.6e-60 236.5 221 56.1
PGSC0003DMG400045715 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.0e-59 231.9 357 40.3
PGSC0003DMG400036486 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-58 231.5 398 37.7
PGSC0003DMG400039379 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.4e-57 225.7 188 58.5
PGSC0003DMG400012035 Solanum tuberosum HOM05D006181 ORTHO05D008560 8.4e-57 225.3 212 58.0
PGSC0003DMG400035362 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.9e-56 224.2 233 51.5
PGSC0003DMG400037913 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-55 221.5 294 43.9
PGSC0003DMG400034462 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.0e-54 216.9 401 36.2
PGSC0003DMG400035188 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.0e-54 216.9 188 59.0
Sopen09g011960 Solanum pennellii HOM05D006181 ORTHO05D008560 2.8e-52 210.3 252 47.6
PGSC0003DMG400041857 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-50 204.9 398 34.4
PGSC0003DMG400037777 Solanum tuberosum HOM05D006181 ORTHO05D008560 4.2e-48 196.4 122 76.2
PGSC0003DMG400044358 Solanum tuberosum HOM05D006181 ORTHO05D008560 5.5e-48 196.1 152 66.4
Sopen05g026400 Solanum pennellii HOM05D006181 ORTHO05D008560 4.6e-47 193.0 351 37.0
PGSC0003DMG400042841 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.3e-46 191.4 124 70.2
PGSC0003DMG400036070 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.3e-46 190.7 145 64.1
PGSC0003DMG400037288 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.3e-46 190.7 129 65.9
PGSC0003DMG400038998 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.3e-46 190.7 157 58.6
Sopen01g023140 Solanum pennellii HOM05D006181 ORTHO05D008560 1.3e-44 184.9 146 61.6
PGSC0003DMG400045773 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.6e-44 184.5 125 66.4
PGSC0003DMG400042988 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.7e-44 183.3 357 33.1
PGSC0003DMG400034426 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.1e-43 180.3 272 39.3
PGSC0003DMG400040697 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-42 178.3 116 71.6
PGSC0003DMG400036179 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.4e-42 176.8 116 69.0
PGSC0003DMG400041915 Solanum tuberosum HOM05D006181 ORTHO05D008560 7.6e-42 175.6 141 66.0
PGSC0003DMG400034764 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.8e-41 173.3 219 50.7
PGSC0003DMG400036901 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.5e-41 172.6 132 61.4
PGSC0003DMG400046417 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.5e-40 170.6 176 54.0
Sopen11g022950 Solanum pennellii HOM05D006181 ORTHO05D008560 1.2e-39 168.3 231 44.2
Sopen03g018750 Solanum pennellii HOM05D006181 ORTHO05D008560 2.1e-39 167.5 321 34.9
PGSC0003DMG400046235 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.7e-39 167.2 128 60.9
PGSC0003DMG400037796 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.1e-39 166.0 147 58.5
PGSC0003DMG400045545 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.8e-38 164.5 123 69.1
PGSC0003DMG400040897 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.5e-37 161.4 115 71.3
PGSC0003DMG400042592 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.9e-37 161.0 343 35.3
PGSC0003DMG400041327 Solanum tuberosum HOM05D006181 ORTHO05D008560 5.7e-37 159.5 187 48.7
PGSC0003DMG400045427 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.7e-37 158.7 211 42.7
PGSC0003DMG400046523 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.6e-36 157.9 112 67.0
Sopen08g013890 Solanum pennellii HOM05D006181 ORTHO05D008560 3.7e-36 156.8 153 56.2
PGSC0003DMG400038353 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.7e-36 156.8 100 68.0
Sopen01g015720 Solanum pennellii HOM05D006181 ORTHO05D008560 2.4e-35 154.1 217 44.2
PGSC0003DMG400002415 Solanum tuberosum HOM05D006181 ORTHO05D008560 4.1e-35 153.3 185 49.7
PGSC0003DMG400046220 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.9e-35 152.5 185 45.9
PGSC0003DMG400038444 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.0e-35 152.1 191 46.6
PGSC0003DMG400036182 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.0e-34 151.0 146 54.1
PGSC0003DMG400039118 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.7e-33 147.9 193 44.0
Sopen03g026710 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-33 147.5 116 66.4
PGSC0003DMG400036111 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.2e-32 143.7 146 52.1
Sopen05g022630 Solanum pennellii HOM05D006181 ORTHO05D008560 4.6e-31 139.8 156 51.9
PGSC0003DMG400038014 Solanum tuberosum HOM05D006181 ORTHO05D008560 7.9e-31 139.0 128 54.7
Sopen05g022940 Solanum pennellii HOM05D000014 ORTHO05D000016 1.4e-30 138.3 121 60.3
PGSC0003DMG400037524 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.9e-30 136.7 128 52.3
Sopen10g017550 Solanum pennellii HOM05D006181 ORTHO05D008560 6.7e-30 136.0 392 29.3
PGSC0003DMG400039078 Solanum tuberosum HOM05D006181 ORTHO05D008560 8.2e-28 129.0 123 53.7
PGSC0003DMG400039790 Solanum tuberosum HOM05D006181 ORTHO05D013925 1.4e-27 128.3 125 52.8
Sopen05g022220 Solanum pennellii HOM05D006181 ORTHO05D008560 1.2e-26 125.2 153 47.7
PGSC0003DMG400034918 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.5e-26 124.8 141 45.4
PGSC0003DMG400046372 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.5e-26 124.8 131 49.6
PGSC0003DMG400043653 Solanum tuberosum HOM05D006181 ORTHO05D008560 4.5e-26 123.2 249 37.3
Sopen03g019130 Solanum pennellii HOM05D006181 ORTHO05D008560 5.9e-26 122.9 194 42.8
Sopen12g017630 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-26 122.9 149 49.7
PGSC0003DMG400044249 Solanum tuberosum HOM05D006181 ORTHO05D008560 5.9e-26 122.9 297 33.3
Sopen11g015380 Solanum pennellii HOM05D000014 ORTHO05D000016 1.7e-25 121.3 173 43.9
Sopen10g013320 Solanum pennellii HOM05D000004 ORTHO05D008560 2.2e-25 120.9 109 58.7
PGSC0003DMG400036210 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.4e-24 118.2 124 52.4
Sopen01g021450 Solanum pennellii HOM05D006181 ORTHO05D030627 4.2e-24 116.7 110 48.2
Sopen10g018370 Solanum pennellii HOM05D006181 ORTHO05D008560 2.1e-23 114.4 205 38.0
PGSC0003DMG400036984 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.1e-23 112.8 157 39.5
PGSC0003DMG400042871 Solanum tuberosum HOM05D006181 ORTHO05D008560 3.0e-22 110.5 362 26.8
Sopen05g022610 Solanum pennellii HOM05D006181 ORTHO05D008560 3.9e-22 110.2 100 56.0
Sopen05g006990 Solanum pennellii HOM05D006181 ORTHO05D008560 5.1e-22 109.8 87 54.0
PGSC0003DMG400035260 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.7e-21 105.5 72 65.3
PGSC0003DMG400039544 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.7e-21 105.5 113 52.2
Sopen10g018530 Solanum pennellii HOM05D006181 ORTHO05D008560 1.3e-20 105.1 115 53.0
PGSC0003DMG400004188 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.8e-20 104.0 192 40.6
PGSC0003DMG400045540 Solanum tuberosum HOM05D006181 ORTHO05D008560 8.2e-20 102.4 58 81.0
PGSC0003DMG400039682 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.1e-19 102.1 140 42.9
Sopen05g025050 Solanum pennellii HOM05D000014 ORTHO05D000016 1.8e-19 101.3 86 60.5
PGSC0003DMG400036948 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.8e-19 101.3 87 63.2
PGSC0003DMG400034623 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-18 98.6 76 60.5
Sopen09g009910 Solanum pennellii HOM05D000014 ORTHO05D000093 3.8e-17 93.6 65 67.7
Sopen07g011990 Solanum pennellii HOM05D000004 ORTHO05D000034 3.6e-15 87.0 72 52.8
PGSC0003DMG400034943 Solanum tuberosum HOM05D006181 ORTHO05D008560 6.1e-15 86.3 73 56.2
Sopen09g012240 Solanum pennellii HOM05D006181 ORTHO05D008560 1.8e-14 84.7 100 45.0
Sopen05g019750 Solanum pennellii HOM05D006181 ORTHO05D008560 4.0e-14 83.6 105 41.9
Sopen10g013950 Solanum pennellii HOM05D006181 ORTHO05D008560 6.7e-14 82.8 70 61.4
Sopen08g015580 Solanum pennellii HOM05D006181 ORTHO05D008560 2.0e-13 81.3 141 36.9
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 9.7e-13 79.0 224 27.2
PGSC0003DMG400036416 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.7e-13 79.0 73 52.1
PGSC0003DMG400044440 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.8e-12 76.6 90 44.4
Sopen03g015730 Solanum pennellii HOM05D006181 ORTHO05D008560 7.0e-11 72.8 79 45.6
PGSC0003DMG400036917 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.2e-10 72.0 40 75.0
Sopen10g018520 Solanum pennellii HOM05D006181 ORTHO05D393457 2.0e-10 71.2 78 53.8
Nitab4.5_0005795g0020 Nicotiana tabacum HOM05D012010 ORTHO05D015171 3.5e-10 70.5 181 28.7
PGSC0003DMG400039558 Solanum tuberosum HOM05D006181 ORTHO05D008560 5.9e-10 69.7 56 60.7
arahy.Tifrunner.gnm1.ann1.I277IB Arachis hypogaea HOM05D005718 ORTHO05D004853 7.7e-10 69.3 201 25.4
PGSC0003DMG400041544 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.7e-10 69.3 214 26.2
arahy.Tifrunner.gnm1.ann1.N9HB9M Arachis hypogaea HOM05D005718 ORTHO05D004853 1.0e-09 68.9 190 27.4
PGSC0003DMG400041853 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.9e-09 67.4 214 27.6
Sopen09g022310 Solanum pennellii HOM05D000014 ORTHO05D000034 5.0e-09 66.6 54 57.4
PGSC0003DMG400034750 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.5e-09 65.9 214 27.1
PGSC0003DMG400047290 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.5e-08 65.1 94 42.6
Nitab4.5_0002345g0120 Nicotiana tabacum HOM05D012010 ORTHO05D015171 1.9e-08 64.7 85 38.8
Nitab4.5_0001513g0030 Nicotiana tabacum HOM05D012010 ORTHO05D015171 2.5e-08 64.3 171 24.6
PGSC0003DMG400046799 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.5e-08 63.2 214 25.7
Sopen12g025650 Solanum pennellii HOM05D006181 ORTHO05D008560 7.2e-08 62.8 92 37.0
PGSC0003DMG400040557 Solanum tuberosum HOM05D000303 ORTHO05D000570 9.4e-08 62.4 175 27.4
Solyc01g057140.1 Solanum lycopersicum HOM05D006181 ORTHO05D008560 1.2e-07 62.0 108 31.5
PGSC0003DMG400038676 Solanum tuberosum HOM05D011278 ORTHO05D014267 1.2e-07 62.0 39 76.9
PGSC0003DMG400035195 Solanum tuberosum HOM05D006181 ORTHO05D008560 1.6e-07 61.6 42 66.7
PGSC0003DMG400041196 Solanum tuberosum HOM05D006181 ORTHO05D000034 2.1e-07 61.2 83 43.4
PGSC0003DMG400046393 Solanum tuberosum HOM05D000303 ORTHO05D000570 4.7e-07 60.1 158 30.4
arahy.Tifrunner.gnm1.ann1.P0BLZN Arachis hypogaea HOM05D005718 ORTHO05D004853 6.1e-07 59.7 223 25.1
PGSC0003DMG400043665 Solanum tuberosum HOM05D006181 ORTHO05D008560 8.0e-07 59.3 53 56.6
PGSC0003DMG400040614 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.4e-06 58.5 188 28.7
Nitab4.5_0006600g0010 Nicotiana tabacum HOM05D012010 ORTHO05D015171 2.3e-06 57.8 148 28.4
arahy.Tifrunner.gnm1.ann1.VX3S13 Arachis hypogaea HOM05D005718 ORTHO05D004853 3.0e-06 57.4 179 27.4
Oeu017546.1 Olea europaea HOM05D007234 ORTHO05D008488 3.0e-06 57.4 220 26.4
PGSC0003DMG400046956 Solanum tuberosum HOM05D006181 ORTHO05D008560 5.2e-06 56.6 71 45.1
Sopen00g007190 Solanum pennellii HOM05D006181 ORTHO05D393218 8.8e-06 55.8 58 53.4


User provided reference genes

Program Settings