Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400046067 Solanum tuberosum HOM05D007592 ORTHO05D004645 9.7e-53 209.9 109 100.0
PGSC0003DMG400037078 Solanum tuberosum HOM05D008583 ORTHO05D004645 4.5e-34 147.9 112 73.2
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 7.2e-32 140.6 84 89.3
PGSC0003DMG400013032 Solanum tuberosum HOM05D007592 ORTHO05D004645 4.7e-31 137.9 87 87.4
Manes.01G069750 Manihot esculenta HOM05D007592 ORTHO05D004645 5.9e-26 120.9 103 60.2
Manes.07G048750 Manihot esculenta HOM05D007592 ORTHO05D004645 3.8e-25 118.2 103 59.2
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 8.9e-22 107.1 105 54.3
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 3.1e-19 98.6 105 52.4
PGSC0003DMG400002254 Solanum tuberosum HOM05D007592 ORTHO05D004645 5.9e-18 94.4 55 89.1
PGSC0003DMG400006215 Solanum tuberosum HOM05D007592 ORTHO05D004645 1.7e-17 92.8 55 89.1
Manes.13G094101 Manihot esculenta HOM05D007592 ORTHO05D004645 3.8e-17 91.7 105 51.4
PGSC0003DMG400029060 Solanum tuberosum HOM05D007592 ORTHO05D004645 2.8e-15 85.5 47 93.6
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.0e-14 82.0 108 46.3
Atru.chr3.1639 Acer truncatum HOM05D007592 ORTHO05D004645 4.4e-13 78.2 100 48.0
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 5.8e-13 77.8 105 47.6
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 2.9e-12 75.5 104 42.3
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 4.9e-12 74.7 99 50.5
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 8.3e-12 73.9 91 49.5
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 2.4e-11 72.4 101 45.5
Manes.03G096216 Manihot esculenta HOM05D007592 ORTHO05D004645 2.4e-11 72.4 77 54.5
Atru.chr6.1370 Acer truncatum HOM05D007592 ORTHO05D004645 5.4e-11 71.2 100 42.0
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 5.4e-11 71.2 105 44.8
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 5.4e-11 71.2 105 44.8
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 9.2e-11 70.5 101 47.5
AL2G23940 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.2e-10 70.1 101 49.5
AL8G44460 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.7e-10 68.9 106 44.3
Atru.chr10.191 Acer truncatum HOM05D007592 ORTHO05D004645 4.6e-10 68.2 96 43.8
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 2.3e-09 65.9 99 40.4
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.3e-09 65.9 106 43.4
AT1G66235 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 6.6e-09 64.3 111 43.2
Ciclev10023655m.g Citrus clementina HOM05D007592 ORTHO05D004645 8.6e-09 63.9 103 41.7
Atru.chr4.1791 Acer truncatum HOM05D007592 ORTHO05D004645 1.1e-08 63.5 100 42.0
Atru.chr12.1217 Acer truncatum HOM05D007592 ORTHO05D004645 3.3e-08 62.0 104 38.5
Manes.16G106550 Manihot esculenta HOM05D007592 ORTHO05D004645 7.3e-08 60.8 48 60.4
Atru.chr3.1033 Acer truncatum HOM05D007592 ORTHO05D004645 1.2e-07 60.1 96 38.5
Oeu053537.1 Olea europaea HOM05D007592 ORTHO05D004645 2.1e-07 59.3 99 46.5
Carub.0004s0678 Capsella rubella HOM05D007592 ORTHO05D004645 2.8e-07 58.9 107 38.3
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 3.6e-07 58.5 108 40.7
Atru.chr13.1766 Acer truncatum HOM05D007592 ORTHO05D004645 6.2e-07 57.8 75 41.3
Manes.03G086206 Manihot esculenta HOM05D007592 ORTHO05D004645 6.2e-07 57.8 48 58.3
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 6.2e-07 57.8 105 35.2
Manes.12G071232 Manihot esculenta HOM05D007592 ORTHO05D004645 6.2e-07 57.8 48 58.3
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 8.0e-07 57.4 99 36.4
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 1.4e-06 56.6 109 38.5
Manes.15G083266 Manihot esculenta HOM05D007592 ORTHO05D004645 3.1e-06 55.5 48 56.2
SalBow3G0485 Salvia bowleyana HOM05D020195 ORTHO05D023117 3.1e-06 55.5 100 41.0
Ciclev10003711m.g Citrus clementina HOM05D007592 ORTHO05D004645 5.2e-06 54.7 73 46.6
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 5.2e-06 54.7 35 71.4
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 6.8e-06 54.3 108 36.1


User provided reference genes

Program Settings