Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.8e-66 254.6 120 100.0
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 7.4e-62 240.4 120 93.3
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.1e-60 235.0 116 93.1
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 6.5e-58 227.3 120 88.3
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 8.8e-47 190.3 119 72.3
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 4.8e-45 184.5 111 75.7
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.4e-43 178.3 121 66.9
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 8.5e-42 173.7 120 65.8
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.5e-41 172.2 95 81.1
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.1e-40 167.5 117 65.0
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 4.4e-38 161.4 107 70.1
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.7e-34 149.4 119 59.7
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.5e-33 145.6 119 58.8
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.4e-33 143.7 116 59.5
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 3.6e-32 141.7 109 58.7
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.3e-30 135.2 116 62.1
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.3e-29 131.0 100 59.0
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 4.1e-28 128.3 119 50.4
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.2e-27 126.7 112 52.7
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.2e-27 126.7 119 50.4
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 1.6e-27 126.3 118 52.5
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 3.5e-27 125.2 112 51.8
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 4.5e-27 124.8 119 50.4
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 5.9e-27 124.4 120 51.7
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.7e-27 124.0 119 49.6
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 1.7e-26 122.9 117 50.4
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.2e-26 122.5 110 49.1
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 5.0e-26 121.3 109 52.3
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 5.0e-26 121.3 119 50.4
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 5.0e-26 121.3 122 51.6
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 6.5e-26 120.9 108 52.8
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 6.5e-26 120.9 122 51.6
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 8.5e-26 120.6 116 50.0
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.1e-25 120.2 119 48.7
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 1.5e-25 119.8 114 51.8
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.5e-25 119.8 119 47.9
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.5e-25 119.8 119 48.7
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.5e-25 119.8 119 48.7
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.5e-25 119.8 115 48.7
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.5e-25 119.0 115 53.0
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 3.2e-25 118.6 119 48.7
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.2e-25 118.2 109 51.4
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.2e-25 118.2 113 53.1
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.2e-25 118.2 113 53.1
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 5.5e-25 117.9 111 50.5
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 5.5e-25 117.9 117 47.9
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.6e-24 116.3 119 48.7
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 2.1e-24 115.9 112 49.1
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 2.7e-24 115.5 113 49.6
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 3.6e-24 115.2 112 50.9
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 4.7e-24 114.8 111 48.6
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 4.7e-24 114.8 117 47.9
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 8.0e-24 114.0 111 54.1
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 1.8e-23 112.8 120 50.0
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.8e-23 112.8 113 46.0
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.8e-23 112.8 113 46.0
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.3e-23 112.5 111 46.8
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 3.0e-23 112.1 116 49.1
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.0e-23 111.7 112 48.2
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 6.7e-23 110.9 112 48.2
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 8.8e-23 110.5 113 46.9
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.8e-23 110.5 112 48.2
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.2e-22 110.2 115 49.6
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 1.2e-22 110.2 119 45.4
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.5e-22 109.8 118 45.8
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.0e-22 109.4 107 46.7
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 2.6e-22 109.0 118 45.8
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.6e-22 109.0 114 45.6
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 2.6e-22 109.0 115 49.6
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 4.4e-22 108.2 112 47.3
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.5e-22 107.5 112 47.3
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 9.7e-22 107.1 102 50.0
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 9.7e-22 107.1 111 45.9
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 9.7e-22 107.1 119 45.4
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 2.2e-21 105.9 114 45.6
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 4.8e-21 104.8 115 47.0
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 4.8e-21 104.8 121 43.8
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 4.8e-21 104.8 107 49.5
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 8.3e-21 104.0 108 44.4
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.4e-20 103.2 110 48.2
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.4e-20 103.2 112 42.9
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.8e-20 102.8 107 48.6
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 4.1e-20 101.7 113 45.1
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.6e-19 99.8 100 45.0
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.7e-19 99.0 109 42.2
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 7.7e-19 97.4 109 43.1
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.7e-18 96.3 110 43.6
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.2e-18 95.9 109 44.0
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 3.8e-18 95.1 102 43.1
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 5.0e-18 94.7 90 51.1
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.5e-18 94.0 109 40.4
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.5e-17 92.4 110 43.6
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.1e-16 89.4 107 39.3
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 3.6e-16 88.6 111 41.4
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 6.1e-16 87.8 111 45.0
Nitab4.5_0000771g0200 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.1e-16 87.8 108 45.4
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.0e-15 87.0 92 44.6
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.8e-15 86.3 113 40.7
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 1.8e-15 86.3 65 63.1
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.8e-15 84.3 112 35.7
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 1.2e-14 83.6 124 37.9
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 2.0e-14 82.8 111 32.4
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.8e-14 80.5 109 36.7
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 9.8e-14 80.5 103 36.9
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.8e-13 79.0 97 40.2
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.3e-13 77.8 71 53.5
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 5.9e-11 71.2 107 31.8
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 5.9e-11 71.2 107 31.8
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 5.5e-09 64.7 83 44.6
Nitab4.5_0006691g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.5e-09 64.7 86 40.7
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 5.5e-09 64.7 117 35.0
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 1.2e-08 63.5 106 31.1
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.2e-08 63.5 112 33.9
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 1.2e-08 63.5 114 30.7
TWI38G0054 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 1.8e-07 59.7 57 49.1
AagrBONN_evm.TU.Sc2ySwM_344.1627 Anthoceros agrestis HOM05D032606 ORTHO05D007872 4.0e-07 58.5 111 28.8
AagrBONN_evm.TU.Sc2ySwM_344.1661 Anthoceros agrestis HOM05D058811 ORTHO05D019592 4.0e-07 58.5 107 32.7
PGR031G1100 Punica granatum HOM05D023640 ORTHO05D007872 8.9e-07 57.4 94 34.0
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.2e-06 57.0 121 31.4
AagrBONN_evm.TU.Sc2ySwM_368.904 Anthoceros agrestis HOM05D032606 ORTHO05D007872 2.6e-06 55.8 115 27.8


User provided reference genes

Program Settings