Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400045567 Solanum tuberosum HOM05D004064 ORTHO05D037746 1.9e-116 422.5 214 100.0
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.0e-58 229.2 193 68.9
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.0e-47 191.4 109 82.6
PGSC0003DMG400039748 Solanum tuberosum HOM05D004064 ORTHO05D037746 8.9e-26 121.3 93 71.0
Sopen07g006420 Solanum pennellii HOM05D004064 ORTHO05D037746 3.3e-20 102.8 102 60.8
PGSC0003DMG400040734 Solanum tuberosum HOM05D022799 ORTHO05D026034 2.6e-17 93.2 76 63.2
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.4e-16 88.6 115 44.3
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.2e-15 84.7 89 41.6
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 1.6e-14 84.0 117 37.6
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 3.9e-13 79.3 115 38.3
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.6e-13 78.2 114 38.6
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.2e-11 74.3 85 44.7
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 2.8e-11 73.2 95 34.7
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 3.6e-11 72.8 144 31.2
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.6e-11 72.8 85 43.5
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.6e-11 72.8 78 44.9
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 6.2e-11 72.0 111 40.5
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 8.1e-11 71.6 106 40.6
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-10 70.9 111 39.6
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.4e-10 70.9 111 39.6
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-10 70.9 111 39.6
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-10 70.9 111 39.6
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-10 70.5 125 35.2
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 8.9e-10 68.2 110 34.5
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 8.9e-10 68.2 110 36.4
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 8.9e-10 68.2 111 38.7
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-09 67.8 111 38.7
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 1.5e-09 67.4 96 37.5
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 2.0e-09 67.0 111 37.8
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 2.0e-09 67.0 87 41.4
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.6e-09 66.6 157 31.2
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 4.4e-09 65.9 111 37.8
CAN.G2504.1 Capsicum annuum HOM05D004064 ORTHO05D009909 5.8e-09 65.5 108 32.4
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 7.6e-09 65.1 90 42.2
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 7.6e-09 65.1 113 32.7
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 7.6e-09 65.1 113 32.7
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 7.6e-09 65.1 113 32.7
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 1.3e-08 64.3 110 33.6
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 1.7e-08 63.9 111 36.0
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.7e-08 63.9 85 38.8
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-08 63.2 111 36.9
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.8e-08 62.8 107 38.3
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 4.9e-08 62.4 113 31.9
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 6.4e-08 62.0 74 39.2
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 6.4e-08 62.0 74 39.2
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 6.4e-08 62.0 56 46.4
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.4e-07 60.8 164 30.5
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.9e-07 60.5 80 41.2
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-07 60.1 80 41.2
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.2e-07 59.7 142 31.0
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 3.2e-07 59.7 160 30.6
Peaxi162Scf00179g00914 Petunia axillaris HOM05D000017 ORTHO05D001349 2.7e-06 56.6 78 39.7
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 2.7e-06 56.6 75 42.7
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.8e-06 55.1 80 40.0


User provided reference genes

Program Settings