Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400045301 Solanum tuberosum HOM05D003106 ORTHO05D013353 7.2e-81 303.9 159 100.0
PGSC0003DMG400034733 Solanum tuberosum HOM05D003106 ORTHO05D013353 3.3e-41 172.2 106 87.7
PGSC0003DMG400046927 Solanum tuberosum HOM05D003106 ORTHO05D013353 1.8e-39 166.4 106 83.0
PGSC0003DMG400043166 Solanum tuberosum HOM05D003106 ORTHO05D013353 3.0e-34 149.1 93 86.0
PGSC0003DMG400043545 Solanum tuberosum HOM05D003106 ORTHO05D013353 1.3e-29 133.7 107 66.4
PGSC0003DMG400013072 Solanum tuberosum HOM05D003106 ORTHO05D013353 8.4e-29 131.0 108 67.6
PGSC0003DMG400044117 Solanum tuberosum HOM05D003106 ORTHO05D013353 2.4e-28 129.4 108 66.7
PGSC0003DMG400043161 Solanum tuberosum HOM05D003106 ORTHO05D013353 5.4e-28 128.3 107 66.4
PGSC0003DMG400042117 Solanum tuberosum HOM05D003106 ORTHO05D013353 9.2e-28 127.5 107 63.6
PGSC0003DMG400011661 Solanum tuberosum HOM05D003106 ORTHO05D013353 2.3e-26 122.9 98 67.3
PGSC0003DMG400011764 Solanum tuberosum HOM05D003106 ORTHO05D013353 3.1e-23 112.5 107 57.9
PGSC0003DMG400034903 Solanum tuberosum HOM05D003106 ORTHO05D013353 5.2e-23 111.7 90 65.6
PGSC0003DMG400040457 Solanum tuberosum HOM05D003106 ORTHO05D013353 3.4e-22 109.0 68 85.3
PGSC0003DMG400035118 Solanum tuberosum HOM05D003106 ORTHO05D013353 2.7e-19 99.4 93 60.2
Sopen02g006680 Solanum pennellii HOM05D003106 ORTHO05D004173 2.1e-16 89.7 108 51.9
Solyc01g057707.1 Solanum lycopersicum HOM05D003106 ORTHO05D004173 4.8e-16 88.6 108 50.9
Nitab4.5_0000157g0210 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.1e-16 87.8 118 44.9
Nitab4.5_0004198g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.0e-15 85.5 107 47.7
Nitab4.5_0000065g0140 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.3e-15 85.1 107 51.4
Nitab4.5_0007510g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.9e-15 84.7 106 44.3
Nitab4.5_0006358g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-14 84.0 106 45.3
Nitab4.5_0001093g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-14 83.2 109 45.0
Nitab4.5_0000979g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-14 82.8 109 45.0
Nitab4.5_0010666g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.4e-14 82.4 107 49.5
Nitab4.5_0016089g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.9e-14 80.9 109 44.0
Nitab4.5_0003816g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-13 80.5 109 44.0
Nitab4.5_0000067g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.7e-13 80.1 82 59.8
Nitab4.5_0000505g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.9e-13 79.3 98 50.0
Nitab4.5_0002080g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.4e-13 77.8 111 45.9
Nitab4.5_0015674g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.4e-13 77.8 95 52.6
Nitab4.5_0000853g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-12 77.4 98 49.0
Nitab4.5_0008221g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-12 77.4 75 53.3
Nitab4.5_0007874g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-12 77.0 76 53.9
Nitab4.5_0001573g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-12 76.3 109 42.2
Nitab4.5_0000664g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.2e-12 75.9 97 49.5
Nitab4.5_0013502g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.2e-12 75.9 108 42.6
Nitab4.5_0005146g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.2e-12 75.5 102 47.1
Nitab4.5_0007731g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.4e-12 75.1 109 40.4
Nitab4.5_0009254g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.1e-12 74.7 106 39.6
Nitab4.5_0000392g0110 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.3e-12 74.3 73 50.7
Nitab4.5_0003361g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.3e-12 74.3 106 50.9
Nitab4.5_0011105g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.3e-12 74.3 103 42.7
Nitab4.5_0000483g0210 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-11 73.9 99 40.4
Nitab4.5_0000619g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-11 73.9 75 53.3
Nitab4.5_0027224g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-11 73.9 68 55.9
Nitab4.5_0016808g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-11 73.6 109 42.2
Nitab4.5_0000853g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-11 73.2 69 56.5
Nitab4.5_0001025g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-11 73.2 76 53.9
Nitab4.5_0001167g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-11 73.2 96 46.9
Nitab4.5_0008044g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-11 73.2 108 43.5
Nitab4.5_0011274g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-11 73.2 100 45.0
PGSC0003DMG400037924 Solanum tuberosum HOM05D003106 ORTHO05D013353 2.1e-11 73.2 70 55.7
Nitab4.5_0001674g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.5e-11 72.4 72 56.9
Nitab4.5_0002557g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.5e-11 72.4 70 54.3
Nitab4.5_0000032g0280 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.6e-11 72.0 68 55.9
Nitab4.5_0008044g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.6e-11 72.0 75 52.0
Nitab4.5_0009163g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.6e-11 72.0 105 48.6
Nitab4.5_0000561g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.0e-11 71.6 101 45.5
PGSC0003DMG400021795 Solanum tuberosum HOM05D003106 ORTHO05D013353 6.0e-11 71.6 79 49.4
Nitab4.5_0001208g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.9e-11 71.2 98 40.8
Nitab4.5_0002080g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.9e-11 71.2 80 52.5
Nitab4.5_0007408g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.9e-11 71.2 108 46.3
Nitab4.5_0000606g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 64 57.8
Nitab4.5_0000970g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 111 46.8
Nitab4.5_0001222g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 76 51.3
Nitab4.5_0002812g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 98 45.9
Nitab4.5_0005263g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 100 42.0
Nitab4.5_0009941g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 102 49.0
Nitab4.5_0012357g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 69 52.2
Nitab4.5_0013192g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.0e-10 69.3 81 50.6
Nitab4.5_0000561g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-10 68.9 97 44.3
Nitab4.5_0006958g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-10 68.9 73 52.1
Nitab4.5_0007731g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-10 68.9 100 42.0
Nitab4.5_0000113g0120 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.1e-10 68.6 85 49.4
Nitab4.5_0000145g0240 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.6e-10 68.2 67 56.7
Nitab4.5_0007408g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.6e-10 68.2 99 42.4
Nitab4.5_0009941g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.7e-10 67.8 57 57.9
Nitab4.5_0000670g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-09 67.0 64 57.8
Nitab4.5_0000193g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.9e-09 66.6 62 58.1
Nitab4.5_0007408g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.9e-09 66.6 74 51.4
Nitab4.5_0023064g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.9e-09 66.6 95 48.4
Nitab4.5_0009730g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-09 66.2 91 49.5
Nitab4.5_0000619g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.3e-09 65.9 56 53.6
Nitab4.5_0001167g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.3e-09 65.9 94 43.6
Nitab4.5_0016539g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.3e-09 65.5 95 43.2
Nitab4.5_0000696g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.6e-09 65.1 105 41.0
Nitab4.5_0000265g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.3e-09 64.7 96 43.8
Nitab4.5_0004031g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.3e-09 64.7 75 52.0
Nitab4.5_0008583g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.3e-09 64.7 87 46.0
Nitab4.5_0010080g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.6e-09 64.3 61 52.5
Nitab4.5_0000504g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-08 63.9 103 41.7
Nitab4.5_0001013g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-08 63.9 79 45.6
Nitab4.5_0006716g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-08 63.9 72 50.0
Nitab4.5_0009730g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-08 63.9 58 55.2
Nitab4.5_0009904g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-08 63.9 69 49.3
Nitab4.5_0006406g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-08 63.5 95 46.3
Nitab4.5_0007874g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-08 63.5 64 53.1
PGSC0003DMG400036819 Solanum tuberosum HOM05D003106 ORTHO05D013353 1.6e-08 63.5 53 56.6
Nitab4.5_0003713g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-08 63.2 65 52.3
Nitab4.5_0004067g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-08 63.2 111 39.6
Nitab4.5_0007731g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-08 63.2 95 42.1
Nitab4.5_0000565g0220 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.8e-08 62.8 95 44.2
Nitab4.5_0001163g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.8e-08 62.8 98 40.8
Nitab4.5_0001417g0130 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.8e-08 62.8 66 54.5
Nitab4.5_0002080g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.6e-08 62.4 91 47.3
Nitab4.5_0004671g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.6e-08 62.4 97 41.2
Nitab4.5_0006693g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.6e-08 62.4 66 54.5
Nitab4.5_0012463g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.6e-08 62.4 73 50.7
Nitab4.5_0024979g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.6e-08 62.4 76 47.4
Nitab4.5_0001881g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.8e-08 62.0 89 46.1
Nitab4.5_0019730g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.8e-08 62.0 62 53.2
Nitab4.5_0000770g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.2e-08 61.6 92 47.8
Nitab4.5_0002227g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.1e-08 61.2 78 48.7
Nitab4.5_0008400g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.1e-08 61.2 95 47.4
Nitab4.5_0004354g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-07 60.5 93 44.1
Nitab4.5_0005663g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.0e-07 58.9 65 52.3
Nitab4.5_0008981g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.3e-07 58.5 60 55.0
Nitab4.5_0007731g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-06 57.4 65 47.7
Nitab4.5_0002006g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-06 57.0 60 46.7
Nitab4.5_0010589g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-06 57.0 61 49.2
Nitab4.5_0013420g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-06 57.0 103 39.8
Nitab4.5_0007692g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-06 56.6 71 46.5
Nitab4.5_0001167g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.4e-06 55.8 98 37.8
PGSC0003DMG400039646 Solanum tuberosum HOM05D003888 ORTHO05D395571 5.8e-06 55.1 98 40.8
PGSC0003DMG400041174 Solanum tuberosum HOM05D003888 ORTHO05D012529 5.8e-06 55.1 42 66.7
Nitab4.5_0020624g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.9e-06 54.3 50 56.0


User provided reference genes

Program Settings