Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400045232 Solanum tuberosum HOM05D000281 ORTHO05D000290 1.0e-64 250.0 131 100.0
CAN.G152.7 Capsicum annuum HOM05D000281 ORTHO05D000290 9.0e-29 130.6 128 51.6
PGSC0003DMG400010814 Solanum tuberosum HOM05D000281 ORTHO05D000290 1.5e-28 129.8 127 56.7
Nitab4.5_0000072g0620 Nicotiana tabacum HOM05D000281 ORTHO05D000290 1.2e-25 120.2 127 49.6
Solyc03g083700.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 1.3e-24 116.7 128 53.1
Solyc03g083710.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 1.9e-23 112.8 128 46.9
Sopen03g023510 Solanum pennellii HOM05D000281 ORTHO05D000290 1.9e-23 112.8 128 46.9
PGSC0003DMG400010813 Solanum tuberosum HOM05D000281 ORTHO05D000290 2.1e-22 109.4 128 44.5
Nitab4.5_0000072g0630 Nicotiana tabacum HOM05D000281 ORTHO05D000290 4.0e-21 105.1 128 41.4
Sopen03g023500 Solanum pennellii HOM05D000281 ORTHO05D000290 6.9e-21 104.4 113 52.2
Peaxi162Scf00241g00054 Petunia axillaris HOM05D000281 ORTHO05D000290 1.0e-19 100.5 128 45.3
Sopen03g023460 Solanum pennellii HOM05D000281 ORTHO05D000290 6.5e-19 97.8 128 39.8
Oeu028536.1 Olea europaea HOM05D000281 ORTHO05D000290 2.7e-17 92.4 129 39.5
Lj1P982T31 Lonicera japonica HOM05D000281 ORTHO05D000290 3.5e-17 92.0 128 35.9
Haze_13849 Corylus avellana HOM05D000281 ORTHO05D000290 1.0e-16 90.5 127 36.2
DCAR_018096 Daucus carota HOM05D000281 ORTHO05D000290 1.3e-16 90.1 129 35.7
DCAR_020198 Daucus carota HOM05D000281 ORTHO05D000290 1.8e-16 89.7 128 34.4
PGSC0003DMG400027617 Solanum tuberosum HOM05D000281 ORTHO05D000290 1.8e-16 89.7 129 33.3
Nitab4.5_0000167g0050 Nicotiana tabacum HOM05D000281 ORTHO05D000290 2.3e-16 89.4 129 34.1
CiPaw.03G095300 Carya illinoinensis HOM05D000281 ORTHO05D000290 5.1e-16 88.2 128 38.3
Solyc03g083660.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 5.1e-16 88.2 128 39.1
Solyc11g019910.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 6.7e-16 87.8 129 32.6
Peaxi162Scf01013g00016 Petunia axillaris HOM05D000281 ORTHO05D000290 1.1e-15 87.0 129 34.9
FAN10G1534 Fragaria x ananassa HOM05D000281 ORTHO05D000290 5.7e-15 84.7 128 33.6
CAN.G746.1 Capsicum annuum HOM05D000281 ORTHO05D000290 7.4e-15 84.3 122 34.4
FvH4_7g27830 Fragaria vesca HOM05D000281 ORTHO05D000290 7.4e-15 84.3 128 33.6
FAN06G1663 Fragaria x ananassa HOM05D000281 ORTHO05D000290 7.4e-15 84.3 128 33.6
Peaxi162Scf00023g00102 Petunia axillaris HOM05D000281 ORTHO05D000290 1.3e-14 83.6 129 38.8
Dinv28555 Davidia involucrata HOM05D000281 ORTHO05D000290 1.6e-14 83.2 129 34.9
FAN03G3160 Fragaria x ananassa HOM05D000281 ORTHO05D000290 1.6e-14 83.2 128 32.8
Sabra15G0141700 Salix brachista HOM05D000281 ORTHO05D000290 3.7e-14 82.0 128 32.8
CiPaw.03G095200 Carya illinoinensis HOM05D000281 ORTHO05D000290 8.2e-14 80.9 128 33.6
Potri.012G127400 Populus trichocarpa HOM05D000281 ORTHO05D000290 1.1e-13 80.5 128 34.4
RcHm_v2.0_Chr1g0374701 Rosa chinensis HOM05D000281 ORTHO05D000290 5.3e-13 78.2 128 32.8
FAN03G3274 Fragaria x ananassa HOM05D000137 ORTHO05D000290 1.2e-12 77.0 124 30.6
Sabra12G0095600 Salix brachista HOM05D000281 ORTHO05D000290 1.2e-12 77.0 128 32.8
Potri.015G128500 Populus trichocarpa HOM05D000281 ORTHO05D000290 1.5e-12 76.6 129 31.0
FAN06G1584 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.6e-12 75.9 125 36.0
Sabra15G0141900 Salix brachista HOM05D000281 ORTHO05D000290 4.5e-12 75.1 128 32.0
Haze_13855 Corylus avellana HOM05D000281 ORTHO05D000290 5.9e-12 74.7 127 33.1
Sabra15G0142300 Salix brachista HOM05D000281 ORTHO05D000290 7.6e-12 74.3 128 33.6
Cfa008211 Carpinus fangiana HOM05D000281 ORTHO05D000290 1.0e-11 73.9 127 34.6
Nn6g34069 Nelumbo nucifera HOM05D000281 ORTHO05D000290 1.0e-11 73.9 129 30.2
CSS0028799 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 1.3e-11 73.6 129 29.5
Sopen11g010020 Solanum pennellii HOM05D000281 ORTHO05D000290 1.3e-11 73.6 109 31.2
Cpa.g.sc3.305 Carica papaya HOM05D000281 ORTHO05D000290 1.7e-11 73.2 129 31.8
SGA_v2.0_scaffold4754G54530 Striga asiatica HOM05D000281 ORTHO05D000290 2.2e-11 72.8 128 32.0
Sabra17G0021700 Salix brachista HOM05D000281 ORTHO05D000290 2.9e-11 72.4 128 32.8
CiPaw.05G217500 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.8e-11 72.0 129 31.0
RcHm_v2.0_Chr1g0374711 Rosa chinensis HOM05D000281 ORTHO05D000290 3.8e-11 72.0 92 38.0
TAR374G0138 Trochodendron aralioides HOM05D000281 ORTHO05D000290 3.8e-11 72.0 128 31.2
ECA238G0978 Erigeron canadensis HOM05D000281 ORTHO05D000290 5.0e-11 71.6 130 31.5
FAN10G1041 Fragaria x ananassa HOM05D000281 ORTHO05D000290 6.5e-11 71.2 131 32.8
CSS0014172 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 1.1e-10 70.5 129 27.9
CiPaw.05G218400 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.1e-10 70.5 124 31.5
CiPaw.04G061200 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.2e-10 68.9 129 34.9
Nn1g01111 Nelumbo nucifera HOM05D000281 ORTHO05D000290 3.2e-10 68.9 127 31.5
Oeu016521.1 Olea europaea HOM05D000281 ORTHO05D000290 3.2e-10 68.9 132 31.1
FAN06G3613 Fragaria x ananassa HOM05D000281 ORTHO05D000290 4.2e-10 68.6 95 33.7
Lsat_1_v5_gn_3_2521 Lactuca sativa HOM05D000281 ORTHO05D000290 4.2e-10 68.6 129 32.6
Cc02_g04120 Coffea canephora HOM05D000281 ORTHO05D000290 5.5e-10 68.2 130 32.3
TWI39G0557 Tripterygium wilfordii HOM05D000281 ORTHO05D000290 7.2e-10 67.8 122 29.5
MELO3C006820.2 Cucumis melo HOM05D000281 ORTHO05D000290 9.3e-10 67.4 129 34.1
Aqoxy7G00698 Aquilegia oxysepala HOM05D000281 ORTHO05D000290 1.2e-09 67.0 130 30.8
Potri.015G128900 Populus trichocarpa HOM05D000281 ORTHO05D000290 1.2e-09 67.0 130 31.5
Lsat_1_v5_gn_2_128861 Lactuca sativa HOM05D000281 ORTHO05D000290 1.6e-09 66.6 129 31.8
Sopen03g023520 Solanum pennellii HOM05D000281 ORTHO05D000290 1.6e-09 66.6 129 31.0
MSTRG.8415 Avicennia marina HOM05D000281 ORTHO05D000290 2.1e-09 66.2 131 33.6
Eucgr.A02882 Eucalyptus grandis HOM05D000281 ORTHO05D000290 2.1e-09 66.2 130 26.9
Sed0006915 Sechium edule HOM05D000281 ORTHO05D000290 2.1e-09 66.2 129 34.1
ClCG05G007410 Citrullus lanatus HOM05D000281 ORTHO05D000290 2.7e-09 65.9 130 31.5
HanXRQChr14g0461491 Helianthus annuus HOM05D000281 ORTHO05D000290 2.7e-09 65.9 129 29.5
Lsat_1_v5_gn_3_2381 Lactuca sativa HOM05D000281 ORTHO05D000290 2.7e-09 65.9 129 32.6
Potri.015G128400 Populus trichocarpa HOM05D000281 ORTHO05D000290 2.7e-09 65.9 127 29.1
QL09p019232 Quercus lobata HOM05D000281 ORTHO05D000290 2.7e-09 65.9 127 31.5
TAR374G1720 Trochodendron aralioides HOM05D000281 ORTHO05D000290 4.6e-09 65.1 127 29.9
Eucgr.K00154 Eucalyptus grandis HOM05D000281 ORTHO05D000290 6.1e-09 64.7 128 34.4
Solyc03g083720.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 6.1e-09 64.7 126 31.0
CANSAT21G1946 Cannabis sativa HOM05D000281 ORTHO05D000290 7.9e-09 64.3 128 29.7
Nn6g34063 Nelumbo nucifera HOM05D000281 ORTHO05D000290 1.0e-08 63.9 126 27.8
Thecc.03G158100 Theobroma cacao HOM05D000281 ORTHO05D000290 1.3e-08 63.5 127 29.1
TAR374G0916 Trochodendron aralioides HOM05D000281 ORTHO05D000290 1.3e-08 63.5 126 30.2
CANSAT21G0692 Cannabis sativa HOM05D000281 ORTHO05D000290 1.8e-08 63.2 128 28.9
Eucgr.A02883 Eucalyptus grandis HOM05D000281 ORTHO05D000290 1.8e-08 63.2 122 32.0
Lj8C40T10 Lonicera japonica HOM05D000281 ORTHO05D000290 1.8e-08 63.2 126 30.2
Phvul.005G007700 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 1.8e-08 63.2 129 25.6
QL09p019270 Quercus lobata HOM05D000281 ORTHO05D000290 1.8e-08 63.2 127 30.7
PGSC0003DMG400010815 Solanum tuberosum HOM05D000281 ORTHO05D000290 1.8e-08 63.2 126 30.2
CAN.G152.6 Capsicum annuum HOM05D000281 ORTHO05D000290 2.3e-08 62.8 126 30.2
Duzib084G0986 Durio zibethinus HOM05D000281 ORTHO05D000290 3.0e-08 62.4 126 28.6
Sabra15G0141600 Salix brachista HOM05D000281 ORTHO05D000290 3.0e-08 62.4 128 26.6
Nn1g01110 Nelumbo nucifera HOM05D000281 ORTHO05D000290 3.9e-08 62.0 128 32.0
THA.LOC104821406 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 3.9e-08 62.0 127 27.6
Phvul.011G005200 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 5.1e-08 61.6 122 27.0
A09p07630 Brassica napus HOM05D000281 ORTHO05D000290 6.7e-08 61.2 127 27.6
BraA09t36415Z Brassica rapa HOM05D000281 ORTHO05D000290 6.7e-08 61.2 127 27.6
Lsat_1_v5_gn_8_9000 Lactuca sativa HOM05D000281 ORTHO05D000290 6.7e-08 61.2 132 28.8
Ciclev10007178m.g Citrus clementina HOM05D000281 ORTHO05D000290 8.7e-08 60.8 126 31.0
Gorai.004G201500 Gossypium raimondii HOM05D000281 ORTHO05D000290 8.7e-08 60.8 127 29.1
MD00G1105100 Malus domestica HOM05D000281 ORTHO05D000290 8.7e-08 60.8 128 28.9
TPR.G7492 Trifolium pratense HOM05D000281 ORTHO05D000290 8.7e-08 60.8 126 29.4
HanXRQChr17g0549021 Helianthus annuus HOM05D000281 ORTHO05D000290 1.1e-07 60.5 130 30.0
Lj2P210T18 Lonicera japonica HOM05D000281 ORTHO05D000290 1.1e-07 60.5 131 29.0
Cfa008205 Carpinus fangiana HOM05D000281 ORTHO05D000290 1.5e-07 60.1 126 27.8
DCAR_027806 Daucus carota HOM05D000281 ORTHO05D000290 1.5e-07 60.1 127 28.3
Nitab4.5_0001579g0150 Nicotiana tabacum HOM05D000281 ORTHO05D000290 1.5e-07 60.1 89 32.6
CsaV3_3G016220 Cucumis sativus L. HOM05D000281 ORTHO05D000290 1.9e-07 59.7 129 32.6
Glyma.04G118900 Glycine max HOM05D000281 ORTHO05D000290 1.9e-07 59.7 129 25.6
Aqoxy7G00699 Aquilegia oxysepala HOM05D000281 ORTHO05D000290 2.5e-07 59.3 127 26.0
Manes.14G034700 Manihot esculenta HOM05D000281 ORTHO05D000290 2.5e-07 59.3 131 29.0
Potri.003G113700 Populus trichocarpa HOM05D000281 ORTHO05D000290 2.5e-07 59.3 129 29.5
TPR.G15126 Trifolium pratense HOM05D000281 ORTHO05D000290 2.5e-07 59.3 130 27.7
MSTRG.8815 Avicennia marina HOM05D000281 ORTHO05D000290 3.3e-07 58.9 131 31.3
CSS0043639 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 3.3e-07 58.9 129 30.2
ClCG10G003050 Citrullus lanatus HOM05D000281 ORTHO05D000290 3.3e-07 58.9 122 31.1
Manes.01G074925 Manihot esculenta HOM05D000281 ORTHO05D000290 3.3e-07 58.9 127 28.3
Manes.06G136100 Manihot esculenta HOM05D000281 ORTHO05D000290 3.3e-07 58.9 127 29.9
Peaxi162Scf00241g00053 Petunia axillaris HOM05D000281 ORTHO05D000290 3.3e-07 58.9 124 29.8
Psat7g150520 Pisum sativum HOM05D000281 ORTHO05D000290 3.3e-07 58.9 127 26.0
Ah.07g207800 Amaranthus hybridus HOM05D000281 ORTHO05D000290 4.3e-07 58.5 136 27.9
Manes.02G034900 Manihot esculenta HOM05D000281 ORTHO05D000290 4.3e-07 58.5 126 28.6
Nitab4.5_0004482g0040 Nicotiana tabacum HOM05D000281 ORTHO05D000290 4.3e-07 58.5 131 26.0
Nitab4.5_0010733g0010 Nicotiana tabacum HOM05D000281 ORTHO05D000290 4.3e-07 58.5 131 26.7
CARHR276130 Cardamine hirsuta HOM05D000281 ORTHO05D000290 5.7e-07 58.2 132 32.6
Lj2g0002453 Lotus japonicus HOM05D000281 ORTHO05D000290 5.7e-07 58.2 131 27.5
Aqoxy7G00697 Aquilegia oxysepala HOM05D000281 ORTHO05D000290 7.4e-07 57.8 131 26.7
AL8G39180 Arabidopsis lyrata HOM05D000281 ORTHO05D000290 7.4e-07 57.8 131 29.0
CDE11G0328 Ceratophyllum demersum HOM05D000281 ORTHO05D000290 7.4e-07 57.8 130 30.0
Manes.06G136200 Manihot esculenta HOM05D000281 ORTHO05D000290 7.4e-07 57.8 130 26.2
Psat7g193360 Pisum sativum HOM05D000281 ORTHO05D000290 7.4e-07 57.8 122 27.0
CAN.G1337.18 Capsicum annuum HOM05D000281 ORTHO05D000290 9.7e-07 57.4 131 26.0
Glyma.06G319200 Glycine max HOM05D000281 ORTHO05D000290 9.7e-07 57.4 110 25.5
Gohir.D08G191600 Gossypium hirsutum HOM05D000281 ORTHO05D000290 1.3e-06 57.0 127 27.6
Psat2g179080 Pisum sativum HOM05D000281 ORTHO05D000290 1.3e-06 57.0 130 26.2
Atru.chr1.678 Acer truncatum HOM05D000281 ORTHO05D000290 1.6e-06 56.6 128 28.9
Carub.0008s2303 Capsella rubella HOM05D000281 ORTHO05D000290 1.6e-06 56.6 131 29.0
Gohir.A08G172800 Gossypium hirsutum HOM05D000281 ORTHO05D000290 1.6e-06 56.6 127 26.8
Lalb_Chr18g0048841 Lupinus albus HOM05D000281 ORTHO05D000290 1.6e-06 56.6 130 29.2
Manes.01G074850 Manihot esculenta HOM05D000281 ORTHO05D000290 1.6e-06 56.6 127 27.6
QL09p019262 Quercus lobata HOM05D000281 ORTHO05D000290 1.6e-06 56.6 127 27.6
Sp2g25520 Schrenkiella parvula HOM05D000281 ORTHO05D000290 1.6e-06 56.6 132 28.8
Cpa.g.sc3.304 Carica papaya HOM05D000281 ORTHO05D000290 2.2e-06 56.2 125 28.0
Haze_13847 Corylus avellana HOM05D000281 ORTHO05D000290 2.2e-06 56.2 116 31.0
FvH4_5g00430 Fragaria vesca HOM05D000281 ORTHO05D000290 2.2e-06 56.2 130 25.4
FAN08G2298 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.2e-06 56.2 130 25.4
FAN13G1439 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.2e-06 56.2 130 25.4
Lalb_Chr18g0048851 Lupinus albus HOM05D000281 ORTHO05D000290 2.2e-06 56.2 110 27.3
Peaxi162Scf00002g00042 Petunia axillaris HOM05D000281 ORTHO05D000290 2.2e-06 56.2 132 25.8
Potri.001G119300 Populus trichocarpa HOM05D000281 ORTHO05D000290 2.2e-06 56.2 126 28.6
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.8e-06 55.8 130 27.7
AT5G62350 Arabidopsis thaliana HOM05D000281 ORTHO05D000290 2.8e-06 55.8 131 28.2
Migut.F00458 Erythranthe guttata HOM05D000281 ORTHO05D000290 2.8e-06 55.8 128 28.9
BolC3t18708H Brassica oleracea HOM05D000281 ORTHO05D000290 3.7e-06 55.5 132 31.8
Dinv22958 Davidia involucrata HOM05D000281 ORTHO05D000290 3.7e-06 55.5 86 29.1
Gorai.004G201600 Gossypium raimondii HOM05D000281 ORTHO05D000290 3.7e-06 55.5 127 26.8
Glyma.12G004600 Glycine max HOM05D000281 ORTHO05D000290 4.8e-06 55.1 122 26.2
Gorai.001G017200 Gossypium raimondii HOM05D000281 ORTHO05D007047 4.8e-06 55.1 115 30.4
HanXRQChr14g0461511 Helianthus annuus HOM05D000281 ORTHO05D000290 4.8e-06 55.1 130 29.2
Manes.02G034800 Manihot esculenta HOM05D000281 ORTHO05D000290 4.8e-06 55.1 127 26.0
PSO170G5529 Papaver somniferum HOM05D000281 ORTHO05D000290 4.8e-06 55.1 133 24.1
PSO782G2464 Papaver somniferum HOM05D000281 ORTHO05D000290 4.8e-06 55.1 133 24.1
QL09p019191 Quercus lobata HOM05D000281 ORTHO05D000290 4.8e-06 55.1 130 25.4
QL09p019199 Quercus lobata HOM05D000281 ORTHO05D000290 4.8e-06 55.1 130 25.4
Aa31LG3G7940 Aethionema arabicum HOM05D000281 ORTHO05D000290 6.3e-06 54.7 138 26.8
BcaB02g09635 Brassica carinata HOM05D000281 ORTHO05D000290 6.3e-06 54.7 131 29.0
A06p29070 Brassica napus HOM05D000281 ORTHO05D000290 6.3e-06 54.7 131 29.0
BraA06t25853Z Brassica rapa HOM05D000281 ORTHO05D000290 6.3e-06 54.7 131 29.0
Gohir.D05G036800 Gossypium hirsutum HOM05D000281 ORTHO05D007047 6.3e-06 54.7 126 28.6
Hma1.2p1_0654F.1_g196610 Hydrangea macrophylla HOM05D000281 ORTHO05D000290 6.3e-06 54.7 127 28.3
BcaB05g24000 Brassica carinata HOM05D000281 ORTHO05D000290 8.2e-06 54.3 140 26.4
BcaC01g02456 Brassica carinata HOM05D000281 ORTHO05D000290 8.2e-06 54.3 131 29.0
C03p64540 Brassica napus HOM05D000281 ORTHO05D000290 8.2e-06 54.3 131 29.0
CDE02G4421 Ceratophyllum demersum HOM05D000281 ORTHO05D000290 8.2e-06 54.3 96 35.4
TWI81G0275 Tripterygium wilfordii HOM05D000281 ORTHO05D000290 8.2e-06 54.3 129 27.9
HPP92_015026 Vanilla planifolia HOM05D000281 ORTHO05D000290 8.2e-06 54.3 128 27.3


User provided reference genes

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