Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400045221 Solanum tuberosum HOM05D008531 ORTHO05D010921 6.1e-94 347.8 207 100.0
PGSC0003DMG400008808 Solanum tuberosum HOM05D008531 ORTHO05D010921 1.8e-53 213.4 142 68.3
PGSC0003DMG400042970 Solanum tuberosum HOM05D008531 ORTHO05D010921 2.2e-35 153.3 109 66.1
PGSC0003DMG400039683 Solanum tuberosum HOM05D008531 ORTHO05D010921 1.9e-31 140.2 104 63.5
Sopen02g009880 Solanum pennellii HOM05D026615 ORTHO05D010921 5.8e-28 128.6 84 70.2
Sopen02g006140 Solanum pennellii HOM05D008531 ORTHO05D010921 3.9e-24 115.9 86 66.3
PGSC0003DMG400034506 Solanum tuberosum HOM05D008531 ORTHO05D010921 9.0e-21 104.8 75 65.3
Nitab4.5_0000383g0210 Nicotiana tabacum HOM05D009957 ORTHO05D012884 2.2e-19 100.1 153 37.9
PGSC0003DMG400035063 Solanum tuberosum HOM05D008531 ORTHO05D010921 6.4e-19 98.6 71 62.0
PGSC0003DMG400003818 Solanum tuberosum HOM05D008531 ORTHO05D010921 2.7e-17 93.2 142 38.0
Nitab4.5_0000179g0080 Nicotiana tabacum HOM05D009957 ORTHO05D012884 8.1e-14 81.6 102 40.2
Nitab4.5_0001132g0040 Nicotiana tabacum HOM05D009957 ORTHO05D012884 8.1e-14 81.6 131 35.9
Nitab4.5_0000018g0220 Nicotiana tabacum HOM05D009957 ORTHO05D012884 5.3e-13 79.0 155 31.6
Nitab4.5_0001144g0010 Nicotiana tabacum HOM05D009957 ORTHO05D012884 6.9e-13 78.6 112 36.6
PGSC0003DMG400037317 Solanum tuberosum HOM05D008531 ORTHO05D010921 1.2e-12 77.8 87 48.3
PGSC0003DMG400043296 Solanum tuberosum HOM05D008531 ORTHO05D010921 3.4e-12 76.3 54 66.7
PGSC0003DMG400035010 Solanum tuberosum HOM05D008531 ORTHO05D010921 7.6e-12 75.1 52 67.3
PGSC0003DMG400017393 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.7e-11 73.9 150 28.7
PGSC0003DMG400010590 Solanum tuberosum HOM05D008531 ORTHO05D010921 2.2e-11 73.6 54 64.8
CAN.G606.27 Capsicum annuum HOM05D000541 ORTHO05D000137 4.9e-11 72.4 156 28.8
Nitab4.5_0003181g0050 Nicotiana tabacum HOM05D009957 ORTHO05D012884 4.9e-11 72.4 82 42.7
Nitab4.5_0001612g0130 Nicotiana tabacum HOM05D009957 ORTHO05D012884 1.9e-10 70.5 103 33.0
CAN.G1103.2 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-10 69.3 156 28.8
PGSC0003DMG400038937 Solanum tuberosum HOM05D008531 ORTHO05D010921 7.1e-10 68.6 45 64.4
PGSC0003DMG400035756 Solanum tuberosum HOM05D008531 ORTHO05D010921 1.2e-09 67.8 52 57.7
PGSC0003DMG400042646 Solanum tuberosum HOM05D008531 ORTHO05D010921 6.0e-09 65.5 42 66.7
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 7.9e-09 65.1 130 33.1
PGSC0003DMG400037221 Solanum tuberosum HOM05D008531 ORTHO05D394681 2.3e-08 63.5 36 86.1
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.0e-08 63.2 145 31.7
CAN.G375.69 Capsicum annuum HOM05D000541 ORTHO05D000137 5.1e-08 62.4 96 33.3
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 5.1e-08 62.4 153 31.4
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.7e-08 61.6 142 28.9
CAN.G2210.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-07 61.2 112 28.6
PGSC0003DMG400034410 Solanum tuberosum HOM05D008531 ORTHO05D010921 1.1e-07 61.2 36 77.8
CAN.G1422.9 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-07 60.8 121 30.6
CAN.G960.83 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-07 60.8 96 33.3
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.5e-07 60.8 142 28.9
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.5e-07 60.8 142 28.9
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.5e-07 60.8 142 28.9
PGSC0003DMG400042827 Solanum tuberosum HOM05D008531 ORTHO05D010921 1.9e-07 60.5 65 47.7
CAN.G1634.5 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-07 60.1 92 32.6
CAN.G963.9 Capsicum annuum HOM05D000009 ORTHO05D000008 2.5e-07 60.1 40 60.0
TWI32G0457 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.5e-07 60.1 142 28.9
PGSC0003DMG400006647 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.3e-07 59.7 89 32.6
CAN.G290.11 Capsicum annuum HOM05D000541 ORTHO05D000137 4.3e-07 59.3 94 33.0
TWI38G0813 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.7e-07 58.9 126 27.8
CAN.G134.37 Capsicum annuum HOM05D000541 ORTHO05D000137 9.6e-07 58.2 92 31.5
MELO3C034907.2 Cucumis melo HOM05D008761 ORTHO05D009079 9.6e-07 58.2 132 30.3
Nitab4.5_0000204g0110 Nicotiana tabacum HOM05D009957 ORTHO05D012884 9.6e-07 58.2 167 28.1
CAN.G1181.32 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-06 57.4 90 32.2
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.6e-06 57.4 142 28.2
Oeu044756.1 Olea europaea HOM05D007816 ORTHO05D000397 2.8e-06 56.6 85 35.3
TWI77G0416 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.8e-06 56.6 100 30.0
Sopen12g020050 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-06 56.2 152 27.6
PGSC0003DMG400023088 Solanum tuberosum HOM05D008585 ORTHO05D030663 3.7e-06 56.2 86 33.7
CAN.G467.20 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.8 92 32.6
CAN.G699.5 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.8 75 33.3
CAN.G959.21 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.8 90 32.2
Nitab4.5_0003532g0090 Nicotiana tabacum HOM05D009957 ORTHO05D012884 4.8e-06 55.8 66 47.0
Oeu043051.1 Olea europaea HOM05D008585 ORTHO05D000397 4.8e-06 55.8 88 30.7
Oeu042812.1 Olea europaea HOM05D007816 ORTHO05D000397 6.3e-06 55.5 89 33.7


User provided reference genes

Program Settings