Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-71 271.9 154 100.0
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-62 241.1 152 88.8
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.8e-48 194.1 132 82.6
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-44 182.6 101 89.1
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-42 176.8 134 83.6
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-37 159.1 126 80.2
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-36 154.8 98 76.5
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.9e-33 146.4 98 72.4
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-32 141.4 112 78.6
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.1e-29 131.0 129 50.4
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-28 130.2 115 73.9
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-27 125.6 99 54.5
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-27 125.6 99 53.5
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-26 122.5 99 52.5
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-25 120.6 99 52.5
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.5e-24 115.5 99 51.5
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-23 114.0 99 50.5
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-23 112.5 137 48.9
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-21 107.1 125 49.6
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.1e-21 104.4 107 51.4
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-20 102.1 119 47.1
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-19 99.0 61 80.3
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.6e-19 97.8 132 38.6
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-18 97.1 93 51.6
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-18 96.3 126 36.5
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 2.9e-18 95.9 99 48.5
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 3.8e-18 95.5 126 45.2
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.9e-17 93.2 163 33.7
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.4e-17 91.7 132 40.2
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.3e-17 90.9 108 48.1
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-16 89.4 157 33.1
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 3.5e-16 89.0 99 39.4
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.6e-16 88.6 99 45.5
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 7.9e-16 87.8 99 39.4
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-15 87.4 99 39.4
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.9e-15 85.5 95 48.4
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-14 82.8 68 54.4
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 4.3e-14 82.0 150 32.7
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.3e-14 81.3 99 41.4
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 9.6e-14 80.9 62 58.1
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.6e-13 79.0 55 70.9
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 3.6e-13 79.0 55 70.9
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.4e-12 77.0 161 34.2
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 1.4e-12 77.0 135 36.3
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-12 77.0 62 56.5
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-12 77.0 72 51.4
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 3.1e-12 75.9 94 39.4
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 6.9e-12 74.7 62 51.6
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 9.0e-12 74.3 125 31.2
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-11 73.9 125 31.2
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 1.5e-11 73.6 125 31.2
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-11 73.2 125 32.0
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-11 73.2 131 30.5
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 2.0e-11 73.2 94 41.5
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.0e-11 73.2 132 32.6
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-11 73.2 64 51.6
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 3.4e-11 72.4 88 43.2
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 3.4e-11 72.4 64 46.9
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.4e-11 72.4 60 55.0
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 4.5e-11 72.0 119 32.8
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 4.5e-11 72.0 125 31.2
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.6e-11 71.2 57 54.4
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-11 70.9 99 39.4
Peaxi162Scf00010g00197 Petunia axillaris HOM05D003888 ORTHO05D007163 1.3e-10 70.5 36 83.3
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.7e-10 70.1 63 49.2
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-10 69.7 90 37.8
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 2.9e-10 69.3 36 80.6
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-10 69.3 111 35.1
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 3.8e-10 68.9 62 50.0
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.9e-10 68.6 83 39.8
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.4e-10 68.2 59 52.5
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.4e-10 67.8 62 46.8
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-09 67.4 102 36.3
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-09 67.0 99 40.4
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-09 66.6 62 46.8
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-09 66.2 94 36.2
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-09 65.9 151 28.5
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-09 65.5 50 56.0
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 7.1e-09 64.7 57 47.4
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 9.3e-09 64.3 36 77.8
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 1.2e-08 63.9 38 71.1
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-08 63.9 62 45.2
Peaxi162Scf00373g00032 Petunia axillaris HOM05D003888 ORTHO05D007163 1.6e-08 63.5 82 41.5
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-08 63.5 107 33.6
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-08 63.2 58 48.3
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 3.5e-08 62.4 62 46.8
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-08 62.4 62 43.5
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-08 62.4 111 35.1
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 6.0e-08 61.6 61 45.9
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-08 61.2 183 22.4
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-08 61.2 48 56.2
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 1.3e-07 60.5 159 24.5
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-07 60.5 62 45.2
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-07 60.1 100 30.0
Peaxi162Scf00962g00310 Petunia axillaris HOM05D008541 ORTHO05D010458 1.8e-07 60.1 37 70.3
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-07 60.1 37 70.3
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-07 60.1 58 48.3
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.3e-07 59.7 145 25.5
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 2.3e-07 59.7 37 67.6
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 3.9e-07 58.9 160 24.4
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 5.1e-07 58.5 165 23.6
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 5.1e-07 58.5 164 23.8
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 6.7e-07 58.2 165 23.6
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-07 58.2 58 46.6
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.5e-06 57.0 67 44.8
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-06 57.0 49 49.0
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 1.5e-06 57.0 36 63.9
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.9e-06 56.6 72 41.7
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 56.2 165 24.2
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-06 55.8 38 65.8
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 4.3e-06 55.5 165 23.0
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 5.6e-06 55.1 92 33.7
Peaxi162Scf00230g00143 Petunia axillaris HOM05D003888 ORTHO05D007163 9.6e-06 54.3 55 49.1
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.6e-06 54.3 60 45.0
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.6e-06 54.3 99 32.3


User provided reference genes

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