Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044628 Solanum tuberosum HOM05D000213 ORTHO05D011567 3.2e-87 325.1 167 100.0
PGSC0003DMG400039175 Solanum tuberosum HOM05D000213 ORTHO05D011567 2.4e-71 272.3 205 72.7
PGSC0003DMG400041197 Solanum tuberosum HOM05D000213 ORTHO05D011567 4.6e-54 214.9 203 59.6
Solyc05g014040.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 4.8e-35 151.8 158 55.1
PGSC0003DMG400034492 Solanum tuberosum HOM05D000213 ORTHO05D011567 2.0e-33 146.4 109 74.3
PGSC0003DMG400038269 Solanum tuberosum HOM05D000213 ORTHO05D011567 2.6e-33 146.0 141 57.4
PGSC0003DMG400036639 Solanum tuberosum HOM05D000213 ORTHO05D011567 1.3e-32 143.7 140 57.1
PGSC0003DMG400035855 Solanum tuberosum HOM05D000213 ORTHO05D011567 8.5e-32 141.0 140 57.1
Solyc03g007640.1 Solanum lycopersicum HOM05D000081 ORTHO05D011567 7.2e-31 137.9 199 47.7
PGSC0003DMG400040494 Solanum tuberosum HOM05D000213 ORTHO05D011567 9.4e-31 137.5 187 45.5
Sopen03g003580 Solanum pennellii HOM05D000213 ORTHO05D011567 2.7e-30 136.0 139 63.3
PGSC0003DMG400040207 Solanum tuberosum HOM05D000213 ORTHO05D011567 6.1e-30 134.8 158 51.9
Solyc05g050060.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 1.5e-28 130.2 140 55.7
Sopen05g009020 Solanum pennellii HOM05D000213 ORTHO05D011567 2.6e-28 129.4 140 55.0
Sopen05g027030 Solanum pennellii HOM05D000213 ORTHO05D011567 3.3e-28 129.0 138 57.2
PGSC0003DMG400037700 Solanum tuberosum HOM05D000213 ORTHO05D011567 7.4e-28 127.9 191 44.0
Solyc05g050050.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 9.7e-28 127.5 140 55.7
Sopen05g009000 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-27 125.9 142 54.2
Solyc05g045880.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 9.1e-26 120.9 133 55.6
CAN.G126.14 Capsicum annuum HOM05D000213 ORTHO05D011567 5.9e-25 118.2 133 51.9
Sopen05g027080 Solanum pennellii HOM05D000213 ORTHO05D011567 5.9e-25 118.2 126 55.6
Solyc05g045710.3 Solanum lycopersicum HOM05D000213 ORTHO05D011567 3.8e-24 115.5 133 54.1
Solyc05g050040.3 Solanum lycopersicum HOM05D000213 ORTHO05D011567 1.1e-23 114.0 118 57.6
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 4.7e-22 108.6 121 56.2
Solyc05g045800.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 2.3e-21 106.3 103 61.2
Solyc04g050210.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 2.0e-20 103.2 158 41.8
Solyc04g050205.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 5.0e-16 88.6 79 57.0
Nitab4.5_0005667g0010 Nicotiana tabacum HOM05D000213 ORTHO05D011567 1.8e-13 80.1 80 52.5
Solyc05g045927.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 2.3e-13 79.7 64 64.1
Nitab4.5_0000472g0220 Nicotiana tabacum HOM05D000213 ORTHO05D011567 6.7e-13 78.2 80 52.5
Solyc05g050065.1 Solanum lycopersicum HOM05D000213 ORTHO05D011567 4.4e-12 75.5 68 58.8
SalBow4G0430 Salvia bowleyana HOM05D000213 ORTHO05D000426 5.5e-07 58.5 95 38.9
CARHR265760 Cardamine hirsuta HOM05D000213 ORTHO05D000426 9.4e-07 57.8 67 41.8
CSS0039253 Camellia sinensis var. sinensis HOM05D000213 ORTHO05D000426 1.2e-06 57.4 48 54.2
Actinidia06440 Actinidia chinensis HOM05D000213 ORTHO05D000426 1.6e-06 57.0 53 45.3
Actinidia08589 Actinidia chinensis HOM05D000213 ORTHO05D000426 1.6e-06 57.0 149 30.9
ECA238G4039 Erigeron canadensis HOM05D000213 ORTHO05D000426 1.6e-06 57.0 55 49.1
vmacro06615 Vaccinium macrocarpon HOM05D000213 ORTHO05D000426 1.6e-06 57.0 165 31.5
Eucgr.A02718 Eucalyptus grandis HOM05D000213 ORTHO05D000426 2.1e-06 56.6 167 29.3
FvH4_5g03210 Fragaria vesca HOM05D000213 ORTHO05D000426 2.1e-06 56.6 63 41.3
FAN08G2668 Fragaria x ananassa HOM05D000213 ORTHO05D000426 2.1e-06 56.6 63 41.3
FAN13G0074 Fragaria x ananassa HOM05D000213 ORTHO05D000426 2.1e-06 56.6 63 41.3
FAN18G3057 Fragaria x ananassa HOM05D000213 ORTHO05D000426 2.1e-06 56.6 63 41.3
HanXRQChr16g0523281 Helianthus annuus HOM05D000213 ORTHO05D000426 2.1e-06 56.6 57 47.4
Migut.F00276 Erythranthe guttata HOM05D000213 ORTHO05D000426 2.7e-06 56.2 48 50.0
Aa31LG3G9070 Aethionema arabicum HOM05D000213 ORTHO05D000426 3.6e-06 55.8 57 45.6
Cfa016304 Carpinus fangiana HOM05D000213 ORTHO05D000426 3.6e-06 55.8 101 34.7
Haze_00062 Corylus avellana HOM05D000213 ORTHO05D000426 3.6e-06 55.8 101 34.7
DCAR_010654 Daucus carota HOM05D000213 ORTHO05D000426 3.6e-06 55.8 143 31.5
Zm00001eb237820 Zea mays HOM05D000213 ORTHO05D000426 3.6e-06 55.8 59 42.4
AL8G27270 Arabidopsis lyrata HOM05D000213 ORTHO05D000426 4.7e-06 55.5 70 42.9
Ciclev10005095m.g Citrus clementina HOM05D000213 ORTHO05D000426 4.7e-06 55.5 58 44.8
Cc02_g02240 Coffea canephora HOM05D000213 ORTHO05D000426 4.7e-06 55.5 48 50.0
COL.COLO4_30290 Corchorus olitorius HOM05D000213 ORTHO05D000426 4.7e-06 55.5 57 42.1
FAN04G0312 Fragaria x ananassa HOM05D000213 ORTHO05D000426 4.7e-06 55.5 63 39.7
SGA_v2.0_scaffold192G40620 Striga asiatica HOM05D000213 ORTHO05D000426 4.7e-06 55.5 59 44.1
SGA_v2.0_scaffold62G21628 Striga asiatica HOM05D000213 ORTHO05D000426 4.7e-06 55.5 59 44.1
AT5G52830 Arabidopsis thaliana HOM05D000213 ORTHO05D000426 6.1e-06 55.1 67 43.3
Solyc02g021680.3 Solanum lycopersicum HOM05D000213 ORTHO05D000426 6.1e-06 55.1 129 30.2
Sopen02g006270 Solanum pennellii HOM05D000213 ORTHO05D000426 6.1e-06 55.1 129 30.2
Os02g0265200 Oryza sativa ssp. japonica HOM05D000213 ORTHO05D000426 8.0e-06 54.7 59 40.7
Rhsim03G0192300 Rhododendron simsii HOM05D000213 ORTHO05D000426 8.0e-06 54.7 158 28.5
Sp6g14990 Schrenkiella parvula HOM05D000213 ORTHO05D000426 8.0e-06 54.7 67 41.8


User provided reference genes

Program Settings