Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044605 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.0e-125 452.6 256 100.0
PGSC0003DMG400035405 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.1e-94 350.5 235 82.1
Sopen05g025010 Solanum pennellii HOM05D008110 ORTHO05D000088 1.9e-59 233.4 292 58.6
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.5e-51 207.2 301 51.8
Solyc01g106250.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 9.9e-48 194.5 298 51.7
Sopen01g048640 Solanum pennellii HOM05D008110 ORTHO05D000088 3.2e-46 189.5 298 52.0
CAN.G241.1 Capsicum annuum HOM05D008110 ORTHO05D000088 3.0e-44 183.0 298 44.3
PGSC0003DMG400044725 Solanum tuberosum HOM05D008110 ORTHO05D000088 4.3e-43 179.1 237 43.5
Sopen02g009350 Solanum pennellii HOM05D008110 ORTHO05D000088 7.3e-43 178.3 299 43.1
Solyc02g026080.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 2.1e-42 176.8 299 42.5
Peaxi162Scf00016g01351 Petunia axillaris HOM05D008110 ORTHO05D000088 1.8e-41 173.7 263 51.3
CAN.G504.44 Capsicum annuum HOM05D000185 ORTHO05D000105 3.1e-41 172.9 238 44.5
Solyc01g108940.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 5.3e-41 172.2 299 48.5
Sopen02g006830 Solanum pennellii HOM05D008110 ORTHO05D000088 1.2e-40 171.0 240 47.5
Sopen01g051140 Solanum pennellii HOM05D008110 ORTHO05D000088 5.8e-40 168.7 299 47.2
PGSC0003DMG400037529 Solanum tuberosum HOM05D008110 ORTHO05D000088 3.8e-39 166.0 237 54.9
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.1e-38 164.5 299 45.2
CAN.G555.3 Capsicum annuum HOM05D008110 ORTHO05D000088 5.4e-38 162.2 272 47.4
Solyc05g041100.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 7.9e-37 158.3 191 59.2
Sopen01g051160 Solanum pennellii HOM05D008110 ORTHO05D000088 6.7e-36 155.2 237 50.6
CAN.G322.59 Capsicum annuum HOM05D008110 ORTHO05D000088 1.8e-33 147.1 310 41.3
Nitab4.5_0008194g0010 Nicotiana tabacum HOM05D008110 ORTHO05D000088 7.6e-32 141.7 261 46.7
Nitab4.5_0001401g0140 Nicotiana tabacum HOM05D008110 ORTHO05D000088 4.9e-31 139.0 261 46.4
CAN.G192.14 Capsicum annuum HOM05D008110 ORTHO05D000088 6.4e-31 138.7 280 46.1
PGSC0003DMG400036386 Solanum tuberosum HOM05D008110 ORTHO05D000088 6.0e-29 132.1 309 43.0
PGSC0003DMG400045703 Solanum tuberosum HOM05D008110 ORTHO05D000088 5.1e-28 129.0 298 33.6
Sopen06g015150 Solanum pennellii HOM05D008110 ORTHO05D000088 1.9e-27 127.1 240 48.8
CAN.G322.83 Capsicum annuum HOM05D008110 ORTHO05D000088 3.3e-27 126.3 95 63.2
Solyc01g109030.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 3.7e-26 122.9 102 59.8
PGSC0003DMG400025830 Solanum tuberosum HOM05D008110 ORTHO05D000088 8.2e-26 121.7 204 52.0
PGSC0003DMG401025831 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.4e-25 120.9 101 60.4
CAN.G192.15 Capsicum annuum HOM05D008110 ORTHO05D000088 1.2e-24 117.9 190 42.6
Cc00_g00220 Coffea canephora HOM05D008110 ORTHO05D000088 2.2e-23 113.6 237 32.5
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 3.8e-23 112.8 85 64.7
RhsimUnG0089900 Rhododendron simsii HOM05D008110 ORTHO05D000088 2.1e-21 107.1 238 28.2
DCAR_022075 Daucus carota HOM05D008110 ORTHO05D000088 8.7e-20 101.7 237 32.5
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 6.3e-18 95.5 237 27.0
MSTRG.17812 Avicennia marina HOM05D008110 ORTHO05D000088 5.9e-16 89.0 248 27.4
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.3e-15 87.8 238 28.6
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 8.5e-15 85.1 238 37.0
SGA_v2.0_scaffold54G19507 Striga asiatica HOM05D008110 ORTHO05D000088 3.2e-14 83.2 68 51.5
Migut.N02603 Erythranthe guttata HOM05D008110 ORTHO05D000088 3.6e-13 79.7 297 25.3
Oeu003285.1 Olea europaea HOM05D008110 ORTHO05D000088 1.8e-12 77.4 283 25.4
Migut.J01193 Erythranthe guttata HOM05D008110 ORTHO05D000088 2.3e-12 77.0 241 25.3
SalBow7G1050 Salvia bowleyana HOM05D008110 ORTHO05D000088 2.3e-12 77.0 78 42.3
Rhsim11G0170700 Rhododendron simsii HOM05D008110 ORTHO05D000088 5.1e-12 75.9 94 39.4
Hma1.2p1_1527F.1_g289060 Hydrangea macrophylla HOM05D008110 ORTHO05D000088 1.5e-11 74.3 67 43.3
CSS0024769 Camellia sinensis var. sinensis HOM05D008110 ORTHO05D000088 1.3e-10 71.2 67 43.3
Cc00_g00230 Coffea canephora HOM05D008110 ORTHO05D000088 6.3e-10 68.9 371 21.6
Oeu025427.1 Olea europaea HOM05D044301 ORTHO05D000088 1.4e-09 67.8 55 54.5
Rhsim02G0167600 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.8e-09 67.4 61 49.2
Cc11_g01500 Coffea canephora HOM05D008110 ORTHO05D000088 2.4e-09 67.0 197 26.9
Sopen01g051190 Solanum pennellii HOM05D008110 ORTHO05D000088 5.3e-09 65.9 63 50.8
SGA_v2.0_scaffold54G19506 Striga asiatica HOM05D008110 ORTHO05D000088 6.9e-09 65.5 258 23.3
Ciclev10026137m.g Citrus clementina HOM05D000823 ORTHO05D000088 2.0e-08 63.9 236 24.2
Nn5g29404 Nelumbo nucifera HOM05D000823 ORTHO05D000088 3.4e-08 63.2 53 50.9
Ciclev10028843m.g Citrus clementina HOM05D000823 ORTHO05D000088 5.9e-08 62.4 300 26.3
Migut.N02605 Erythranthe guttata HOM05D008110 ORTHO05D000088 1.3e-07 61.2 46 54.3
QL11p039199 Quercus lobata HOM05D000823 ORTHO05D000088 1.3e-07 61.2 40 55.0
Sopen01g051230 Solanum pennellii HOM05D008110 ORTHO05D000088 1.7e-07 60.8 54 55.6
Carub.0008s2085 Capsella rubella HOM05D009243 ORTHO05D011355 2.2e-07 60.5 240 22.9
SGA_v2.0_scaffold223G42874 Striga asiatica HOM05D008110 ORTHO05D000088 5.0e-07 59.3 73 34.2
TAR628G1487 Trochodendron aralioides HOM05D000823 ORTHO05D000088 6.5e-07 58.9 64 43.8
Ah.01g019890 Amaranthus hybridus HOM05D001349 ORTHO05D001980 3.2e-06 56.6 66 40.9
Atru.chr5.2872 Acer truncatum HOM05D000823 ORTHO05D000088 5.5e-06 55.8 64 46.9
ClCG01G016540 Citrullus lanatus HOM05D000395 ORTHO05D000088 5.5e-06 55.8 40 45.0
TWI31G0648 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 5.5e-06 55.8 237 22.8
TWI75G0037 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 5.5e-06 55.8 62 43.5
MBI16_g31478_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 7.2e-06 55.5 40 50.0
Eucgr.A01956 Eucalyptus grandis HOM05D008110 ORTHO05D000088 9.4e-06 55.1 56 41.1
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 9.4e-06 55.1 42 50.0
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 9.4e-06 55.1 39 59.0


User provided reference genes

Program Settings