Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.2e-44 181.0 94 100.0
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-34 149.1 90 84.4
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 5.6e-33 144.1 93 80.6
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 9.6e-33 143.3 90 81.1
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 2.8e-32 141.7 86 84.9
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 4.8e-32 141.0 90 80.0
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.2e-32 140.6 93 79.6
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-31 139.0 93 78.5
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-31 139.0 93 78.5
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-31 138.7 93 79.6
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-31 138.7 93 79.6
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.4e-31 138.7 93 80.6
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 5.3e-31 137.5 93 75.3
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 9.0e-31 136.7 93 78.5
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-30 136.0 93 77.4
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-30 136.0 93 78.5
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-30 136.0 93 76.3
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-30 134.4 93 77.4
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 5.8e-30 134.0 93 77.4
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 9.9e-30 133.3 83 80.7
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 9.9e-30 133.3 93 73.1
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-29 132.9 94 77.7
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-29 131.7 106 69.8
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.9e-29 131.7 88 78.4
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 8.4e-29 130.2 92 73.9
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-28 129.8 106 68.9
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-28 129.4 93 73.1
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-28 128.6 77 81.8
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 3.2e-28 128.3 93 73.1
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 5.5e-28 127.5 77 80.5
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 7.1e-28 127.1 79 79.7
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 7.9e-27 123.6 93 74.2
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 1.8e-26 122.5 76 81.6
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-26 122.5 76 78.9
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 3.0e-26 121.7 91 72.5
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.6e-25 117.5 72 87.5
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-24 116.3 70 84.3
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 1.3e-21 106.3 72 77.8
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 2.2e-21 105.5 73 76.7
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 1.9e-20 102.4 72 76.4
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.2e-20 101.7 66 80.3
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 7.9e-19 97.1 56 83.9
PGSC0003DMG400045026 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.1e-17 93.2 72 72.2
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 4.3e-17 91.3 96 55.2
PGSC0003DMG400046823 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.3e-16 87.4 51 84.3
Sopen03g016440 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-15 85.5 55 74.5
Sopen04g019050 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-15 85.5 55 74.5
PGSC0003DMG400009722 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.1e-15 84.7 51 82.4
Sopen01g009500 Solanum pennellii HOM05D007930 ORTHO05D007166 6.9e-15 84.0 52 76.9
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 9.0e-15 83.6 48 83.3
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 1.2e-14 83.2 61 70.5
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 6.5e-13 77.4 94 41.5
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 6.5e-13 77.4 94 41.5
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-12 76.3 49 75.5
PGSC0003DMG400038760 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-12 75.5 52 69.2
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 7.2e-12 73.9 80 47.5
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 7.2e-12 73.9 94 39.4
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 9.4e-12 73.6 43 83.7
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.6e-11 72.8 94 41.5
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.6e-11 71.6 94 40.4
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 3.6e-11 71.6 94 38.3
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 4.6e-11 71.2 94 40.4
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 6.1e-11 70.9 98 38.8
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.0e-10 70.1 92 41.3
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 1.0e-10 70.1 92 42.4
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.4e-10 69.7 94 40.4
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 3.0e-10 68.6 90 37.8
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 3.9e-10 68.2 43 74.4
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 5.1e-10 67.8 91 39.6
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 6.7e-10 67.4 91 39.6
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 2.0e-09 65.9 91 39.6
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-09 65.5 46 69.6
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 4.3e-09 64.7 92 38.0
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 4.3e-09 64.7 92 40.2
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 7.4e-09 63.9 82 43.9
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 9.7e-09 63.5 93 33.3
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 9.7e-09 63.5 65 41.5
PGSC0003DMG400047111 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.8e-08 62.0 39 74.4
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 4.8e-08 61.2 79 40.5
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 6.3e-08 60.8 90 35.6
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 8.2e-08 60.5 54 50.0
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 1.1e-07 60.1 82 37.8
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 4.1e-07 58.2 58 44.8
PGSC0003DMG400044440 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.3e-07 57.8 71 50.7
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 5.3e-07 57.8 79 34.2
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 4.5e-06 54.7 76 35.5


User provided reference genes

Program Settings