Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044576 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.7e-88 329.3 173 100.0
PGSC0003DMG400005968 Solanum tuberosum HOM05D007832 ORTHO05D009598 9.0e-53 210.7 172 68.6
Sopen11g026860 Solanum pennellii HOM05D007832 ORTHO05D009598 2.2e-51 206.1 162 67.3
PGSC0003DMG400035463 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.1e-37 158.7 180 51.7
CAN.G1184.14 Capsicum annuum HOM05D007832 ORTHO05D009598 3.0e-24 115.9 157 42.7
Nitab4.5_0007309g0020 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.0e-23 113.2 158 43.7
Nitab4.5_0000234g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.3e-22 110.5 140 47.1
PGSC0003DMG400005533 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.2e-22 109.8 177 38.4
CAN.G1392.11 Capsicum annuum HOM05D007832 ORTHO05D009598 6.3e-22 108.2 157 40.8
CAN.G843.3 Capsicum annuum HOM05D007832 ORTHO05D009598 1.6e-20 103.6 143 41.3
PGSC0003DMG400005534 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.6e-20 103.6 164 39.0
PGSC0003DMG400039981 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.8e-19 99.0 164 36.6
CAN.G843.1 Capsicum annuum HOM05D007832 ORTHO05D009598 1.1e-18 97.4 143 39.2
Sopen12g007870 Solanum pennellii HOM05D007832 ORTHO05D009598 1.1e-18 97.4 173 38.7
Sopen12g007960 Solanum pennellii HOM05D007832 ORTHO05D009598 1.1e-18 97.4 160 39.4
CAN.G843.2 Capsicum annuum HOM05D007832 ORTHO05D009598 1.5e-18 97.1 143 37.8
Sopen12g007920 Solanum pennellii HOM05D007832 ORTHO05D009598 1.9e-18 96.7 173 38.7
Solyc12g016170.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 2.5e-18 96.3 142 40.8
Sopen12g025810 Solanum pennellii HOM05D007832 ORTHO05D009598 9.4e-18 94.4 172 38.4
PGSC0003DMG400035476 Solanum tuberosum HOM05D007832 ORTHO05D009598 9.4e-18 94.4 160 40.0
PGSC0003DMG400034608 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.1e-17 93.2 160 39.4
Solyc12g016180.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 2.7e-17 92.8 142 40.1
Sopen12g007950 Solanum pennellii HOM05D007832 ORTHO05D009598 6.1e-17 91.7 172 37.2
Peaxi162Scf00006g00057 Petunia axillaris HOM05D007832 ORTHO05D009598 8.0e-17 91.3 160 38.1
Peaxi162Scf00006g00075 Petunia axillaris HOM05D007832 ORTHO05D009598 8.0e-17 91.3 160 38.1
Peaxi162Scf00440g00014 Petunia axillaris HOM05D007832 ORTHO05D009598 8.0e-17 91.3 160 38.8
Nitab4.5_0008777g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.8e-16 90.1 151 37.1
PGSC0003DMG400044231 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.0e-16 89.4 160 38.8
PGSC0003DMG400046736 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.0e-16 89.0 176 36.4
PGSC0003DMG400045649 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.2e-16 88.6 160 38.1
Nitab4.5_0000153g0130 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.0e-15 86.7 165 34.5
PGSC0003DMG400044285 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.0e-15 86.7 153 37.3
Peaxi162Scf00593g00002 Petunia axillaris HOM05D014229 ORTHO05D009598 2.6e-15 86.3 143 36.4
Peaxi162Scf00611g00515 Petunia axillaris HOM05D007832 ORTHO05D009598 3.4e-15 85.9 143 37.1
Peaxi162Scf00307g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 1.7e-14 83.6 141 37.6
Peaxi162Scf00894g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 1.7e-14 83.6 141 37.6
Peaxi162Scf03110g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 1.7e-14 83.6 141 37.6
Peaxi162Scf00538g00047 Petunia axillaris HOM05D007832 ORTHO05D009598 3.1e-13 79.3 136 35.3
CAN.G201.31 Capsicum annuum HOM05D007832 ORTHO05D009598 7.7e-12 74.7 120 38.3
CAN.G782.17 Capsicum annuum HOM05D007832 ORTHO05D009598 3.8e-11 72.4 181 33.7
PGSC0003DMG400037342 Solanum tuberosum HOM05D007832 ORTHO05D009598 8.5e-11 71.2 176 30.7
Carub.0006s0539 Capsella rubella HOM05D000307 ORTHO05D010810 1.1e-10 70.9 127 33.9
Sopen12g025820 Solanum pennellii HOM05D000004 ORTHO05D009598 1.1e-10 70.9 130 34.6
Peaxi162Scf00617g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 2.5e-10 69.7 144 34.7
CAN.G1392.12 Capsicum annuum HOM05D007832 ORTHO05D009598 3.2e-10 69.3 73 49.3
PGSC0003DMG400047062 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.2e-10 69.3 160 32.5
Atru.chr1.1376 Acer truncatum HOM05D000307 ORTHO05D000166 5.5e-10 68.6 157 30.6
Nitab4.5_0002260g0260 Nicotiana tabacum HOM05D007832 ORTHO05D009598 5.5e-10 68.6 135 32.6
Peaxi162Scf29147g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 1.6e-09 67.0 108 37.0
Peaxi162Scf00617g00003 Petunia axillaris HOM05D007832 ORTHO05D009598 3.6e-09 65.9 135 38.5
Nitab4.5_0007309g0050 Nicotiana tabacum HOM05D007832 ORTHO05D009598 8.0e-09 64.7 94 39.4
Peaxi162Scf00617g00012 Petunia axillaris HOM05D007832 ORTHO05D009598 8.0e-09 64.7 132 37.1
PGSC0003DMG400041411 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.3e-08 63.2 159 32.7
Solyc12g016150.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 3.0e-08 62.8 117 37.6
Solyc12g017300.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 3.0e-08 62.8 103 37.9
Peaxi162Scf00617g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 4.0e-08 62.4 134 36.6
SGA_v2.0_scaffold153G36988 Striga asiatica HOM05D000307 ORTHO05D009598 6.8e-08 61.6 143 30.1
Nitab4.5_0000163g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.5e-07 60.5 160 30.0
Prupe.7G092700 Prunus persica HOM05D000307 ORTHO05D000166 2.0e-07 60.1 128 29.7
Duzib106G1547 Durio zibethinus HOM05D000307 ORTHO05D000166 2.6e-07 59.7 154 29.2
Prupe.7G092900 Prunus persica HOM05D000307 ORTHO05D000166 2.6e-07 59.7 164 27.4
Thhalv10027229m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 3.4e-07 59.3 136 29.4
Nitab4.5_0000738g0160 Nicotiana tabacum HOM05D000307 ORTHO05D009598 3.4e-07 59.3 160 30.6
Thhalv10021945m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 4.4e-07 58.9 153 25.5
Peaxi162Scf00061g00181 Petunia axillaris HOM05D000307 ORTHO05D009598 4.4e-07 58.9 160 29.4
Peaxi162Scf00593g00034 Petunia axillaris HOM05D007832 ORTHO05D009598 4.4e-07 58.9 121 33.9
Peaxi162Scf01193g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 4.4e-07 58.9 128 38.3
Sp3g10030 Schrenkiella parvula HOM05D000307 ORTHO05D000166 4.4e-07 58.9 146 30.1
Gohir.D11G332700 Gossypium hirsutum HOM05D000307 ORTHO05D000166 9.8e-07 57.8 154 26.6
Gorai.007G363700 Gossypium raimondii HOM05D000307 ORTHO05D000166 9.8e-07 57.8 154 26.6
Sopen12g025800 Solanum pennellii HOM05D007832 ORTHO05D009598 9.8e-07 57.8 86 39.5
SGA_v2.0_scaffold511G52625 Striga asiatica HOM05D000307 ORTHO05D000166 1.3e-06 57.4 149 30.9
CAN.G843.4 Capsicum annuum HOM05D007832 ORTHO05D009598 1.7e-06 57.0 73 41.1
Sp3g10040 Schrenkiella parvula HOM05D000307 ORTHO05D000166 2.2e-06 56.6 141 31.9
Thhalv10022157m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 2.8e-06 56.2 154 27.9
Prupe.7G092800 Prunus persica HOM05D000307 ORTHO05D000166 2.8e-06 56.2 147 25.2
Lalb_Chr15g0087771 Lupinus albus HOM05D000307 ORTHO05D000166 3.7e-06 55.8 158 25.9
AL3G39810 Arabidopsis lyrata HOM05D000307 ORTHO05D000166 4.9e-06 55.5 141 30.5
THA.LOC104827443 Tarenaya hassleriana HOM05D000307 ORTHO05D000166 4.9e-06 55.5 123 27.6
Aa31LG11G7280 Aethionema arabicum HOM05D000307 ORTHO05D010810 6.3e-06 55.1 159 26.4
Nitab4.5_0004114g0070 Nicotiana tabacum HOM05D007832 ORTHO05D009598 6.3e-06 55.1 97 35.1
CSS0047438 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 8.3e-06 54.7 155 27.7


User provided reference genes

Program Settings