Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044473 Solanum tuberosum HOM05D011278 ORTHO05D014267 4.1e-187 657.9 331 100.0
PGSC0003DMG400003239 Solanum tuberosum HOM05D011278 ORTHO05D014267 6.9e-118 427.9 348 67.8
PGSC0003DMG400002096 Solanum tuberosum HOM05D011278 ORTHO05D014267 1.0e-89 334.3 282 68.1
PGSC0003DMG400008245 Solanum tuberosum HOM05D011278 ORTHO05D014267 2.8e-79 299.7 220 69.1
PGSC0003DMG400040930 Solanum tuberosum HOM05D011278 ORTHO05D014267 1.8e-54 217.2 130 87.7
PGSC0003DMG400009169 Solanum tuberosum HOM05D011278 ORTHO05D014267 2.4e-54 216.9 317 47.0
PGSC0003DMG400039224 Solanum tuberosum HOM05D011278 ORTHO05D014267 4.3e-51 206.1 161 68.9
PGSC0003DMG400046070 Solanum tuberosum HOM05D011278 ORTHO05D014267 4.7e-34 149.4 212 50.0
PGSC0003DMG400047140 Solanum tuberosum HOM05D011278 ORTHO05D014267 1.0e-28 131.7 80 85.0
PGSC0003DMG400038676 Solanum tuberosum HOM05D011278 ORTHO05D014267 2.8e-26 123.6 82 78.0
PGSC0003DMG400035213 Solanum tuberosum HOM05D011278 ORTHO05D014267 1.4e-22 111.3 244 33.6
Nitab4.5_0003768g0070 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.1e-14 85.1 118 40.7
PGSC0003DMG400025964 Solanum tuberosum HOM05D000679 ORTHO05D000137 5.4e-14 82.8 112 34.8
PGSC0003DMG400037689 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.0e-13 79.3 113 36.3
Sopen05g026050 Solanum pennellii HOM05D000679 ORTHO05D000137 7.8e-13 79.0 112 34.8
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 2.3e-12 77.4 116 41.4
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 2.3e-12 77.4 116 40.5
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 2.3e-12 77.4 116 40.5
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 2.3e-12 77.4 116 40.5
Nitab4.5_0001031g0290 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.0e-12 77.0 118 37.3
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 3.9e-12 76.6 116 40.5
Nitab4.5_0004850g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.1e-12 76.3 118 37.3
Nitab4.5_0005271g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.7e-12 75.5 118 37.3
Nitab4.5_0019772g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.7e-12 75.5 118 37.3
Nitab4.5_0000884g0100 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.5e-11 74.7 259 27.0
Solyc08g066625.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.5e-11 74.7 116 40.5
Nitab4.5_0023553g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.9e-11 74.3 123 34.1
Nitab4.5_0001329g0160 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.5e-11 73.9 124 35.5
Nitab4.5_0003033g0070 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.3e-11 73.2 114 37.7
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.3e-11 73.2 274 27.4
Nitab4.5_0001425g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.3e-11 72.4 120 35.8
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.3e-11 72.4 118 36.4
Nitab4.5_0007035g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.3e-10 71.6 116 36.2
PGSC0003DMG400043944 Solanum tuberosum HOM05D000679 ORTHO05D000137 2.8e-10 70.5 112 33.9
Nitab4.5_0022061g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.1e-10 68.9 250 27.2
Nitab4.5_0000471g0160 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.1e-09 67.0 116 33.6
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.0e-09 66.6 118 36.4
Nitab4.5_0011007g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.9e-09 65.9 266 25.9
Nitab4.5_0018926g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.0e-09 65.5 127 33.9
PGSC0003DMG400045823 Solanum tuberosum HOM05D000679 ORTHO05D000137 9.0e-09 65.5 113 36.3
Nitab4.5_0004712g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.5e-08 64.7 104 36.5
PGSC0003DMG400039352 Solanum tuberosum HOM05D000679 ORTHO05D000482 1.5e-08 64.7 226 24.3
Sopen05g008010 Solanum pennellii HOM05D000679 ORTHO05D000137 4.5e-08 63.2 229 24.9
Nitab4.5_0009015g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.8e-08 62.8 274 24.1
Nitab4.5_0005900g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.9e-08 62.0 101 35.6
Sopen11g015890 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-07 61.6 83 37.3
Sopen05g020640 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-06 58.5 76 36.8
Sopen07g015500 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-06 58.5 229 24.5
Sopen08g011470 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-06 58.2 75 36.0
PGSC0003DMG402001724 Solanum tuberosum HOM05D011278 ORTHO05D014267 2.4e-06 57.4 52 63.5
Nitab4.5_0002459g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.2e-06 57.0 81 39.5
Sopen09g012220 Solanum pennellii HOM05D000679 ORTHO05D000137 3.2e-06 57.0 76 36.8
Sopen12g023980 Solanum pennellii HOM05D000679 ORTHO05D000137 7.1e-06 55.8 75 37.3


User provided reference genes

Program Settings