Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-53 211.1 108 100.0
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-32 143.3 115 69.6
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 7.2e-32 140.6 108 69.4
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-31 139.4 108 69.4
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-31 139.4 108 68.5
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 7.9e-31 137.1 94 76.6
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.9e-30 134.8 108 63.0
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.7e-30 134.0 108 64.8
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-29 132.5 108 63.9
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-29 131.7 108 66.7
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 7.4e-29 130.6 108 63.0
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-28 127.9 115 64.3
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-28 127.9 122 61.5
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-28 127.9 115 61.7
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 1.1e-27 126.7 115 62.6
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.5e-25 117.5 108 59.3
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.5e-25 117.1 115 59.1
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.4e-24 116.3 108 58.3
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-24 115.9 115 57.4
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 3.2e-24 115.2 101 60.4
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-23 113.2 114 59.6
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-23 111.3 115 59.1
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 6.1e-23 110.9 82 69.5
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-23 110.5 108 55.6
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 1.4e-22 109.8 108 56.5
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-22 108.6 108 56.5
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.9e-22 108.2 116 59.5
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 5.1e-22 107.8 80 70.0
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-21 105.5 108 54.6
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.3e-21 105.1 71 71.8
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 7.4e-21 104.0 115 53.9
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-19 99.4 98 58.2
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-19 98.6 108 56.5
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-19 98.2 99 50.5
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.5e-18 96.3 71 67.6
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-18 95.9 115 52.2
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.4e-18 95.1 90 65.6
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 7.7e-18 94.0 108 50.9
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 1.3e-17 93.2 99 47.5
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-17 93.2 62 72.6
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-16 90.1 103 57.3
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-15 85.9 104 53.8
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-14 83.2 87 48.3
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.9e-14 81.6 62 67.7
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.7e-14 80.9 82 52.4
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-13 79.7 87 55.2
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-13 79.3 124 41.9
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 7.4e-13 77.4 63 60.3
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.3e-11 71.2 57 61.4
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.0e-11 70.9 104 41.3
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-10 70.1 103 38.8
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-10 69.3 72 48.6
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.9e-09 65.5 62 50.0
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.8e-09 65.1 45 57.8
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 3.8e-09 65.1 74 44.6
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.8e-09 65.1 95 36.8
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-08 62.8 107 34.6
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-08 62.4 78 42.3
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-08 62.4 46 63.0
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-08 62.4 107 34.6
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.2e-08 62.0 61 47.5
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 4.2e-08 61.6 46 60.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-08 61.2 62 43.5
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-08 60.5 58 43.1
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-07 59.7 103 34.0
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-07 58.9 107 33.6
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 3.6e-07 58.5 76 39.5
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.1e-07 57.8 71 43.7
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-07 57.8 57 43.9
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-06 57.0 107 32.7
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.4e-06 56.6 82 39.0
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.8e-06 56.2 82 37.8
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-06 55.5 39 66.7
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-06 55.5 55 43.6
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.0e-06 55.1 81 38.3
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.2e-06 54.7 82 39.0
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-06 54.3 49 46.9
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.8e-06 53.9 81 38.3
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.8e-06 53.9 82 39.0


User provided reference genes

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