Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044186 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-162 574.7 273 100.0
PGSC0003DMG400046215 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.5e-81 306.2 272 55.1
PGSC0003DMG400041453 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.2e-81 305.4 272 56.2
PGSC0003DMG400034761 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-79 300.8 272 54.4
PGSC0003DMG400047234 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.8e-79 300.1 273 54.2
PGSC0003DMG400040678 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.7e-78 295.0 268 54.5
PGSC0003DMG400039562 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-77 293.9 272 53.7
PGSC0003DMG400042805 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.9e-75 285.0 271 52.8
PGSC0003DMG400034976 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.8e-71 273.5 272 51.1
PGSC0003DMG400037847 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.4e-70 268.9 250 52.4
PGSC0003DMG400039577 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-66 256.1 237 54.0
PGSC0003DMG400037716 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.6e-64 249.2 213 54.5
PGSC0003DMG400044245 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-63 247.3 139 77.7
PGSC0003DMG400044226 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.3e-63 246.5 169 66.9
PGSC0003DMG400035349 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.6e-59 232.3 272 48.5
PGSC0003DMG400039545 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.6e-58 228.4 213 51.2
PGSC0003DMG400047132 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-56 224.2 272 46.3
PGSC0003DMG400043679 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.3e-55 219.9 218 51.4
PGSC0003DMG400038274 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.1e-55 219.5 272 45.2
Sopen11g022700 Solanum pennellii HOM05D003150 ORTHO05D003532 1.9e-52 210.3 272 45.6
PGSC0003DMG400041530 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.0e-51 205.3 178 54.5
PGSC0003DMG400046979 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-47 194.5 216 47.2
PGSC0003DMG400046130 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.0e-46 190.3 272 38.6
PGSC0003DMG400037998 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.6e-46 189.9 194 49.0
PGSC0003DMG400045642 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.9e-45 185.7 173 49.7
PGSC0003DMG400041544 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.6e-43 179.1 271 36.2
PGSC0003DMG400026773 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-42 177.9 127 70.1
PGSC0003DMG400034750 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-42 176.4 260 37.7
PGSC0003DMG400046799 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.3e-41 172.9 231 37.7
PGSC0003DMG400047275 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.6e-41 171.4 259 40.9
PGSC0003DMG400039259 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.2e-40 168.7 246 37.4
PGSC0003DMG400046250 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.1e-40 168.3 108 67.6
Sopen09g016900 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-38 161.8 125 58.4
PGSC0003DMG400045563 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-37 159.5 122 59.0
PGSC0003DMG400041853 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.9e-37 159.1 210 38.6
PGSC0003DMG400036307 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-33 147.1 170 45.9
PGSC0003DMG400043460 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.3e-33 145.2 152 49.3
PGSC0003DMG400041191 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.9e-30 134.8 105 56.2
PGSC0003DMG400034683 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-29 132.9 148 45.3
PGSC0003DMG400045170 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-28 131.0 188 35.6
PGSC0003DMG400037089 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.7e-27 126.7 272 33.1
PGSC0003DMG400039734 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.0e-27 125.6 187 35.3
PGSC0003DMG400042701 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.1e-26 122.5 185 34.6
PGSC0003DMG400042063 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.7e-26 122.1 194 35.1
PGSC0003DMG400023047 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-25 120.6 158 41.1
PGSC0003DMG400034785 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.5e-25 120.2 139 41.7
Sopen10g020270 Solanum pennellii HOM05D003150 ORTHO05D003532 4.3e-25 119.4 93 65.6
PGSC0003DMG400038538 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-24 117.9 268 28.4
PGSC0003DMG400035949 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-23 114.4 178 32.6
PGSC0003DMG400035954 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.8e-23 114.0 111 47.7
PGSC0003DMG400038112 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.9e-23 112.1 85 62.4
PGSC0003DMG400041052 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.0e-22 110.5 173 34.1
Sopen07g014940 Solanum pennellii HOM05D003150 ORTHO05D003532 5.8e-22 109.0 158 36.7
PGSC0003DMG400034407 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.9e-21 106.7 191 31.9
PGSC0003DMG400043837 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-20 104.4 75 69.3
PGSC0003DMG400047115 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.6e-16 90.9 159 31.4
PGSC0003DMG400035852 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.8e-16 90.1 194 29.9
Sopen09g025550 Solanum pennellii HOM05D003150 ORTHO05D003532 4.8e-16 89.4 134 34.3
PGSC0003DMG400040023 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.8e-16 89.4 120 37.5
PGSC0003DMG400038090 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-15 88.2 114 36.8
PGSC0003DMG400042387 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-15 88.2 138 35.5
PGSC0003DMG400047088 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.8e-15 87.4 218 29.4
PGSC0003DMG400037949 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.4e-15 87.0 136 36.0
Sopen00g009940 Solanum pennellii HOM05D003150 ORTHO05D003532 3.1e-15 86.7 70 54.3
PGSC0003DMG400046329 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.1e-15 86.7 69 62.3
PGSC0003DMG400036448 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.3e-15 85.9 138 35.5
PGSC0003DMG400042865 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.4e-14 83.2 61 59.0
PGSC0003DMG400039928 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-13 81.3 106 34.9
PGSC0003DMG400040357 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.9e-13 80.1 106 34.9
PGSC0003DMG400035013 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-13 79.7 118 38.1
PGSC0003DMG400037471 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.5e-13 79.0 124 33.1
Sopen10g009330 Solanum pennellii HOM05D003150 ORTHO05D003532 1.4e-12 77.8 115 36.5
Sopen12g020580 Solanum pennellii HOM05D003150 ORTHO05D003532 1.4e-12 77.8 67 49.3
Sopen03g009020 Solanum pennellii HOM05D003150 ORTHO05D003532 7.1e-12 75.5 126 32.5
PGSC0003DMG400046594 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.3e-12 75.1 59 61.0
Sopen10g026280 Solanum pennellii HOM05D003150 ORTHO05D003532 1.2e-11 74.7 129 35.7
PGSC0003DMG400035904 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.6e-11 74.3 49 75.5
PGSC0003DMG400035744 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.5e-11 73.2 199 26.1
CAN.G47.17 Capsicum annuum HOM05D003150 ORTHO05D003532 4.6e-11 72.8 114 35.1
PGSC0003DMG400043124 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.6e-11 72.8 47 68.1
Nitab4.5_0000780g0120 Nicotiana tabacum HOM05D011204 ORTHO05D011566 6.1e-11 72.4 170 26.5
PGSC0003DMG400039507 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-10 71.2 49 61.2
PGSC0003DMG400035804 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.3e-10 70.5 70 52.9
PGSC0003DMG400043159 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-10 70.1 103 43.7
Ca_13647_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.7e-10 68.9 217 27.2
PGSC0003DMG400041444 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.7e-10 68.9 206 26.7
Ca_03088_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.7e-10 68.6 218 28.0
PGSC0003DMG400046231 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-09 68.2 49 59.2
Ca_12186_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-09 67.8 227 27.3
Ca_27869_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-09 67.8 179 28.5
Migut.K01060 Erythranthe guttata HOM05D029106 ORTHO05D003532 2.5e-09 67.0 225 25.3
PGSC0003DMG400038159 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.5e-09 67.0 81 39.5
PGSC0003DMG400044914 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.5e-09 67.0 48 58.3
PGSC0003DMG400044946 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.7e-09 65.9 67 52.2
CsaV3_6G014490 Cucumis sativus L. HOM05D007234 ORTHO05D008488 7.4e-09 65.5 158 27.2
PGSC0003DMG400042345 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.4e-09 65.5 104 32.7
Ca_11946_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.3e-08 64.7 204 26.5
Nitab4.5_0008383g0010 Nicotiana tabacum HOM05D008707 ORTHO05D014667 1.3e-08 64.7 70 38.6
Sopen07g019450 Solanum pennellii HOM05D000014 ORTHO05D000016 1.3e-08 64.7 136 33.8
Ca_02735_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.2e-08 63.9 189 29.1
Ca_26688_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.2e-08 63.9 151 28.5
Sopen04g021750 Solanum pennellii HOM05D003150 ORTHO05D003532 2.2e-08 63.9 123 30.1
PGSC0003DMG400041598 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.2e-08 63.9 49 55.1
MELO3C021476.2 Cucumis melo HOM05D007234 ORTHO05D008488 2.8e-08 63.5 158 25.3
CAN.G721.1 Capsicum annuum HOM05D003150 ORTHO05D003532 3.7e-08 63.2 107 32.7
Ca_01955_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.7e-08 63.2 151 29.1
TPR.G8600 Trifolium pratense HOM05D005718 ORTHO05D004853 3.7e-08 63.2 248 23.4
CAN.G1215.7 Capsicum annuum HOM05D003150 ORTHO05D003532 4.8e-08 62.8 77 37.7
PGSC0003DMG400041578 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.8e-08 62.8 79 39.2
Ca_02739_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.3e-08 62.4 191 28.3
Sopen01g012530 Solanum pennellii HOM05D003150 ORTHO05D003532 6.3e-08 62.4 46 56.5
Sopen04g018650 Solanum pennellii HOM05D003150 ORTHO05D003532 6.3e-08 62.4 76 30.3
PGSC0003DMG400034543 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.3e-08 62.4 103 33.0
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 1.1e-07 61.6 209 26.8
Ca_24171_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-07 61.6 212 26.9
Ca_14684_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-07 61.2 199 26.6
Ca_20635_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-07 61.2 219 26.0
Ca_26948_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-07 61.2 151 27.8
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 1.4e-07 61.2 151 26.5
PGSC0003DMG400045038 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-07 61.2 49 55.1
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 1.4e-07 61.2 180 25.6
ClCG02G021720 Citrullus lanatus HOM05D007234 ORTHO05D008488 1.8e-07 60.8 158 25.3
Ca_08870_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.1e-07 59.7 178 28.7
Ca_27659_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.1e-07 59.7 143 28.7
Ca_28401_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.1e-07 59.7 123 31.7
Migut.O00074 Erythranthe guttata HOM05D029106 ORTHO05D003532 4.1e-07 59.7 240 27.1
Nitab4.5_0004673g0020 Nicotiana tabacum HOM05D011204 ORTHO05D011566 4.1e-07 59.7 153 24.8
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 4.1e-07 59.7 251 23.9
Ca_19976_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.3e-07 59.3 193 27.5
Ca_23989_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.3e-07 59.3 199 26.6
PGSC0003DMG400046347 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.3e-07 59.3 87 40.2
Oeu046571.1 Olea europaea HOM05D007234 ORTHO05D008488 1.2e-06 58.2 163 24.5
SHI06343 Sapria himalayana HOM05D000014 ORTHO05D000093 1.2e-06 58.2 137 24.8
Ca_24064_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-06 57.8 128 29.7
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 1.5e-06 57.8 242 25.2
Medtr5g095330 Medicago truncatula HOM05D005718 ORTHO05D004853 2.0e-06 57.4 263 24.7
PGSC0003DMG400037108 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.0e-06 57.4 42 57.1
Ca_02193_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.4e-06 56.6 153 28.1
Oeu012540.1 Olea europaea HOM05D007234 ORTHO05D008488 3.4e-06 56.6 227 24.2
Sopen06g012880 Solanum pennellii HOM05D003150 ORTHO05D003532 3.4e-06 56.6 101 28.7
Ca_07541_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.5e-06 56.2 123 29.3
PGSC0003DMG400039721 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-05 55.1 78 35.9


User provided reference genes

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