Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400044125 Solanum tuberosum HOM05D009034 ORTHO05D009362 9.1e-181 636.7 309 100.0
PGSC0003DMG400036424 Solanum tuberosum HOM05D009034 ORTHO05D009362 2.1e-121 439.5 355 66.8
Sopen01g052330 Solanum pennellii HOM05D009034 ORTHO05D009362 3.1e-120 435.6 353 64.9
Sopen01g051920 Solanum pennellii HOM05D009034 ORTHO05D009362 1.5e-119 433.3 348 69.0
Solyc01g109730.1 Solanum lycopersicum HOM05D009034 ORTHO05D009362 4.6e-92 342.0 292 67.1
CAN.G1058.2 Capsicum annuum HOM05D009034 ORTHO05D009362 1.7e-81 307.0 337 52.8
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.6e-74 283.1 348 51.1
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.0e-63 246.9 330 47.0
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 7.0e-56 221.9 415 41.9
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 3.0e-51 206.5 240 51.2
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 2.2e-49 200.3 290 45.5
Nitab4.5_0009972g0050 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.0e-46 191.4 195 54.4
CAN.G958.3 Capsicum annuum HOM05D009034 ORTHO05D009362 2.3e-46 190.3 354 39.5
CAN.G696.2 Capsicum annuum HOM05D009034 ORTHO05D009362 1.5e-45 187.6 355 39.2
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.8e-43 180.6 348 40.2
PGSC0003DMG400044507 Solanum tuberosum HOM05D009034 ORTHO05D009362 1.2e-42 177.9 351 38.2
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.6e-39 166.0 233 46.4
Nitab4.5_0009799g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.9e-39 165.6 264 42.8
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.3e-38 163.7 232 45.7
Nitab4.5_0006159g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.0e-38 162.5 279 39.1
Sopen03g020740 Solanum pennellii HOM05D000004 ORTHO05D009362 2.5e-37 160.2 110 70.0
PGSC0003DMG400036040 Solanum tuberosum HOM05D009034 ORTHO05D009362 5.8e-34 149.1 249 40.2
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.1e-32 142.9 242 38.4
Nitab4.5_0004390g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.2e-31 141.4 200 44.0
Nitab4.5_0000783g0030 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.3e-30 137.9 218 43.1
Nitab4.5_0002662g0080 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.5e-29 134.4 175 44.6
Peaxi162Scf00016g00068 Petunia axillaris HOM05D009034 ORTHO05D009362 8.1e-28 128.6 132 54.5
Nitab4.5_0000283g0190 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.4e-27 127.9 134 52.2
Nitab4.5_0003526g0040 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.7e-25 119.8 148 45.3
PGSC0003DMG400024922 Solanum tuberosum HOM05D000257 ORTHO05D004041 6.4e-25 119.0 257 32.3
Nitab4.5_0003603g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.3e-22 111.3 131 48.9
Peaxi162Scf01164g00412 Petunia axillaris HOM05D009034 ORTHO05D009362 1.1e-21 108.2 253 34.4
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 1.4e-16 91.3 308 26.3
PGSC0003DMG402024921 Solanum tuberosum HOM05D009034 ORTHO05D009362 6.0e-15 85.9 113 42.5
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 7.8e-15 85.5 309 28.8
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 1.3e-14 84.7 335 28.4
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 5.1e-14 82.8 312 29.5
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 8.6e-14 82.0 260 26.9
Nitab4.5_0000283g0270 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.3e-13 79.7 83 50.6
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 4.7e-12 76.3 274 28.5
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 4.7e-12 76.3 300 25.0
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 2.4e-11 73.9 305 27.9
Nitab4.5_0002096g0090 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.9e-11 72.4 76 50.0
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 3.4e-10 70.1 310 26.5
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 3.4e-10 70.1 273 26.4
Prupe.4G220100 Prunus persica HOM05D008179 ORTHO05D009362 1.3e-09 68.2 273 28.2
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.2e-09 67.4 320 25.6
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 1.1e-08 65.1 295 25.8
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 1.1e-08 65.1 114 36.0
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 1.1e-08 65.1 149 30.9
Solyc01g110170.1 Solanum lycopersicum HOM05D009034 ORTHO05D009362 1.1e-08 65.1 58 55.2
Prupe.4G219800 Prunus persica HOM05D008179 ORTHO05D009362 1.2e-07 61.6 335 25.4
Nitab4.5_0012773g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.7e-07 60.5 205 28.8
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 3.5e-07 60.1 275 28.4
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 3.0e-06 57.0 314 25.2
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 5.1e-06 56.2 279 27.6
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 5.1e-06 56.2 278 27.0


User provided reference genes

Program Settings