Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 4.8e-49 197.6 104 100.0
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 9.0e-32 140.2 104 76.0
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 1.7e-30 136.0 104 75.0
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 2.5e-29 132.1 105 75.2
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 3.0e-27 125.2 104 70.2
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 8.2e-25 117.1 106 67.9
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 6.9e-24 114.0 106 63.2
Sopen03g022070 Solanum pennellii HOM05D008837 ORTHO05D006961 6.9e-24 114.0 108 65.7
Nitab4.5_0000319g0160 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.2e-23 113.2 103 63.1
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 7.2e-21 104.0 104 62.5
Nitab4.5_0000319g0100 Nicotiana tabacum HOM05D008837 ORTHO05D006961 9.3e-21 103.6 81 72.8
Nitab4.5_0014067g0010 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.8e-19 99.4 99 61.6
Nitab4.5_0000319g0090 Nicotiana tabacum HOM05D008837 ORTHO05D006961 2.5e-18 95.5 105 56.2
Sopen03g022090 Solanum pennellii HOM05D008837 ORTHO05D006961 2.9e-14 82.0 102 54.9
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 9.4e-13 77.0 103 44.7
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 2.1e-12 75.9 116 45.7
Solyc03g082370.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.1e-12 75.9 101 51.5
Nitab4.5_0005040g0040 Nicotiana tabacum HOM05D008837 ORTHO05D006961 2.7e-12 75.5 50 80.0
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 2.7e-12 75.5 104 49.0
Peaxi162Scf00300g00088 Petunia axillaris HOM05D008837 ORTHO05D006961 4.6e-12 74.7 107 48.6
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 4.6e-12 74.7 107 47.7
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 1.4e-11 73.2 102 47.1
Peaxi162Scf00300g00087 Petunia axillaris HOM05D008837 ORTHO05D006961 1.4e-11 73.2 99 46.5
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.9e-11 71.6 109 45.9
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 5.7e-10 67.8 104 45.2
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.7e-09 66.2 106 44.3
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 2.2e-09 65.9 104 45.2
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 2.8e-09 65.5 105 41.0
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 2.8e-09 65.5 105 43.8
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 4.8e-09 64.7 103 45.6
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 6.3e-09 64.3 102 44.1
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.1e-08 63.5 104 46.2
vmacro06438 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.4e-08 63.2 101 43.6
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.4e-08 62.4 104 46.2
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 4.1e-08 61.6 101 44.6
Cpa.g.sc3.157 Carica papaya HOM05D008837 ORTHO05D011237 5.3e-08 61.2 101 42.6
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 1.5e-07 59.7 104 41.3
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 2.6e-07 58.9 104 40.4
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 3.4e-07 58.5 105 43.8
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 5.9e-07 57.8 102 43.1
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 1.0e-06 57.0 102 42.2
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 1.0e-06 57.0 107 40.2
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 1.0e-06 57.0 104 39.4
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 1.0e-06 57.0 104 39.4
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 2.9e-06 55.5 103 36.9
Sc13g0010250 Simmondsia chinensis HOM05D008837 ORTHO05D006961 3.8e-06 55.1 104 39.4
AT5G54165 Arabidopsis thaliana HOM05D011561 ORTHO05D011237 5.0e-06 54.7 103 37.9
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 5.0e-06 54.7 108 40.7
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 5.0e-06 54.7 100 40.0
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 5.0e-06 54.7 103 37.9
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 6.5e-06 54.3 103 35.9
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 6.5e-06 54.3 103 40.8
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 6.5e-06 54.3 103 37.9
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 8.5e-06 53.9 101 37.6


User provided reference genes

Program Settings