Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.3e-87 325.1 175 100.0
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 5.4e-45 184.9 329 42.6
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 9.1e-45 184.1 329 42.6
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 6.1e-41 171.4 321 41.4
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-38 163.3 312 40.4
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.3e-34 148.7 87 87.4
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.5e-34 147.5 87 86.2
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-33 146.7 88 86.4
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-32 143.7 87 83.9
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 8.9e-32 141.0 88 83.0
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 4.4e-31 138.7 88 80.7
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 9.8e-31 137.5 88 80.7
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.9e-30 136.0 84 84.5
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 3.9e-27 125.6 175 51.4
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.5e-26 123.6 279 37.3
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 7.5e-23 111.3 144 51.4
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 1.7e-22 110.2 174 43.7
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.1e-19 98.6 275 33.8
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-18 95.5 211 34.6
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-18 95.1 191 36.6
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-17 93.6 156 44.2
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.6e-17 92.4 164 40.9
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.1e-17 91.3 189 37.6
PGSC0003DMG400023226 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.8e-16 90.1 164 41.5
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-16 88.6 210 35.7
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.9e-16 87.8 253 30.4
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-15 87.0 87 54.0
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-15 86.7 84 54.8
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-15 85.9 87 54.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-15 85.9 87 54.0
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-15 85.1 87 51.7
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.6e-15 84.7 151 39.7
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.6e-15 84.7 87 51.7
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-14 83.6 87 51.7
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-14 83.2 87 50.6
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-14 83.2 87 52.9
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-14 82.8 318 28.0
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-14 82.8 260 29.6
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.9e-14 82.8 292 29.5
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-14 82.4 84 52.4
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-13 80.9 87 49.4
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-13 80.9 87 48.3
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-13 79.3 202 35.1
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-13 79.0 191 32.5
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.1e-13 78.2 88 50.0
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.1e-13 78.2 243 30.9
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.1e-13 78.2 262 29.4
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.2e-13 77.8 85 51.8
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.2e-13 77.8 45 86.7
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-12 76.6 77 53.2
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-12 76.3 87 51.7
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-12 75.5 255 29.0
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.8e-12 74.7 77 50.6
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-11 73.9 219 30.1
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.3e-11 73.9 45 84.4
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-10 69.3 87 48.3
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-10 68.9 65 53.8
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-10 68.9 75 50.7
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 7.3e-10 68.2 143 35.7
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-09 66.6 83 49.4
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.1e-09 66.6 87 47.1
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.7e-09 65.5 67 52.2
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-08 64.3 263 25.9
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-08 62.8 62 51.6
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.0e-08 62.4 257 28.0
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-07 60.5 173 30.1
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.9e-07 57.8 66 48.5
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-06 57.4 79 43.0
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-06 57.4 88 40.9
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-06 57.4 79 43.0
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-06 56.6 66 47.0
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-06 56.6 79 44.3
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-06 56.2 91 40.7
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-06 55.8 79 40.5
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-06 55.8 134 35.1
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-06 55.1 54 53.7


User provided reference genes

Program Settings