Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043570 Solanum tuberosum HOM05D003911 ORTHO05D002175 1.7e-131 472.6 237 100.0
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 7.2e-69 264.6 276 56.2
PGSC0003DMG400036224 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.2e-51 205.3 123 79.7
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.7e-36 155.6 109 75.2
PGSC0003DMG400035210 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.7e-31 139.8 96 76.0
Solyc02g005145.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 3.9e-30 136.0 243 37.0
Solyc09g062990.2 Solanum lycopersicum HOM05D003911 ORTHO05D002175 6.8e-27 125.2 105 64.8
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 3.2e-24 116.3 109 60.6
CAN.G400.14 Capsicum annuum HOM05D003911 ORTHO05D001773 4.6e-23 112.5 199 40.2
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-19 99.8 271 32.1
Sopen09g017340 Solanum pennellii HOM05D000995 ORTHO05D000638 1.2e-15 87.8 53 79.2
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-13 81.3 102 47.1
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.3e-13 79.7 103 46.6
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-13 79.3 103 47.6
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-13 79.3 103 48.5
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-12 77.8 103 46.6
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-12 75.9 247 26.3
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-12 75.5 306 23.9
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-12 75.1 104 47.1
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-11 74.3 104 46.2
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-11 72.0 267 24.3
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-10 70.1 137 35.0
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 4.9e-09 65.9 266 24.1
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-09 65.5 121 39.7
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-09 65.5 105 42.9
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-09 65.1 94 43.6
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-08 62.8 104 40.4
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-08 61.6 77 37.7
Nitab4.5_0001800g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-07 60.1 58 43.1
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-07 59.7 131 28.2
Nitab4.5_0003185g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-07 59.7 131 27.5
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.0e-07 58.9 44 56.8
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 6.0e-07 58.9 102 38.2
CAN.G536.2 Capsicum annuum HOM05D000995 ORTHO05D001773 7.9e-07 58.5 58 48.3
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.9e-07 58.5 61 44.3
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.9e-07 58.5 116 34.5
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.9e-07 58.5 48 50.0
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.9e-07 58.5 56 48.2
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-06 58.2 57 40.4
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-06 58.2 166 27.1
Nitab4.5_0000043g0360 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-06 57.8 108 31.5
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-06 57.8 44 54.5
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-06 57.8 129 30.2
Nitab4.5_0000015g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-06 56.6 44 54.5
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-06 56.6 75 42.7
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-06 56.2 52 48.1
Nitab4.5_0001742g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-06 55.5 82 39.0
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-06 55.5 44 52.3
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-06 55.1 73 43.8
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-06 55.1 76 42.1
Nitab4.5_0002884g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.7e-06 55.1 88 35.2


User provided reference genes

Program Settings