Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043513 Solanum tuberosum HOM05D008741 ORTHO05D010787 8.0e-88 327.0 161 100.0
PGSC0003DMG400044755 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.8e-40 168.3 155 52.9
PGSC0003DMG400035832 Solanum tuberosum HOM05D008741 ORTHO05D010787 5.3e-31 138.3 95 62.1
PGSC0003DMG400038446 Solanum tuberosum HOM05D008741 ORTHO05D010787 5.9e-30 134.8 89 64.0
PGSC0003DMG400023197 Solanum tuberosum HOM05D008741 ORTHO05D010787 9.3e-28 127.5 87 62.1
Sopen12g021570 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-27 127.1 72 70.8
PGSC0003DMG400012935 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.8e-24 115.2 112 50.9
CAN.G198.29 Capsicum annuum HOM05D008741 ORTHO05D010787 3.4e-22 109.0 93 49.5
CAN.G1512.5 Capsicum annuum HOM05D008741 ORTHO05D010787 7.2e-20 101.3 93 49.5
Nitab4.5_0001172g0140 Nicotiana tabacum HOM05D008741 ORTHO05D010787 1.2e-19 100.5 94 50.0
PGSC0003DMG400007751 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.6e-19 100.1 121 45.5
CAN.G165.9 Capsicum annuum HOM05D008741 ORTHO05D010787 6.1e-19 98.2 93 48.4
CAN.G1093.2 Capsicum annuum HOM05D008741 ORTHO05D010787 1.4e-18 97.1 93 47.3
CAN.G433.7 Capsicum annuum HOM05D008741 ORTHO05D010787 1.8e-18 96.7 93 46.2
CAN.G78.19 Capsicum annuum HOM05D008741 ORTHO05D010787 3.0e-18 95.9 94 46.8
PGSC0003DMG400012467 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.4e-17 92.0 85 49.4
CAN.G183.6 Capsicum annuum HOM05D008741 ORTHO05D010787 1.3e-16 90.5 107 41.1
CAN.G303.25 Capsicum annuum HOM05D008741 ORTHO05D010787 2.2e-16 89.7 181 32.0
PGSC0003DMG400017162 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.2e-16 89.7 85 48.2
CAN.G108.14 Capsicum annuum HOM05D008741 ORTHO05D010787 3.7e-16 89.0 132 37.1
Peaxi162Scf00429g00041 Petunia axillaris HOM05D008741 ORTHO05D010787 3.7e-16 89.0 154 35.1
CAN.G126.3 Capsicum annuum HOM05D008741 ORTHO05D010787 1.4e-15 87.0 137 35.8
PGSC0003DMG400039121 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.8e-15 86.7 169 33.7
CAN.G836.50 Capsicum annuum HOM05D008741 ORTHO05D010787 9.1e-15 84.3 161 33.5
CAN.G546.55 Capsicum annuum HOM05D008741 ORTHO05D010787 2.0e-14 83.2 161 32.9
Peaxi162Scf00072g00004 Petunia axillaris HOM05D008741 ORTHO05D010787 1.7e-13 80.1 157 33.1
PGSC0003DMG400046449 Solanum tuberosum HOM05D008741 ORTHO05D010787 8.5e-13 77.8 125 39.2
PGSC0003DMG400034382 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-12 77.0 125 39.2
PGSC0003DMG400034876 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-12 77.0 125 39.2
PGSC0003DMG400039980 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-12 77.0 125 39.2
PGSC0003DMG400046857 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-12 77.0 125 39.2
PGSC0003DMG400043531 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.9e-12 76.6 125 40.0
Sopen04g015170 Solanum pennellii HOM05D008741 ORTHO05D010787 2.5e-12 76.3 84 44.0
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 7.4e-09 64.7 77 42.9
Sopen01g016950 Solanum pennellii HOM05D008741 ORTHO05D037680 1.7e-08 63.5 41 61.0
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.1e-07 60.8 76 39.5
SGA_v2.0_scaffold1G00312 Striga asiatica HOM05D001383 ORTHO05D000309 1.4e-07 60.5 76 35.5
SGA_v2.0_scaffold309G48181 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-07 60.1 76 35.5
SGA_v2.0_scaffold55G19721 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-07 60.1 76 35.5
SGA_v2.0_scaffold5G03007 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-07 60.1 76 35.5
SGA_v2.0_scaffold88G27215 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-07 60.1 78 34.6
CAN.G2150.1 Capsicum annuum HOM05D000550 ORTHO05D000400 3.1e-07 59.3 98 38.8
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.1e-07 57.8 76 36.8
SGA_v2.0_scaffold17G08080 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-06 57.4 123 31.7
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 1.6e-06 57.0 103 36.9
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 57.0 82 34.1
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 2.0e-06 56.6 141 32.6
DCAR_026361 Daucus carota HOM05D001383 ORTHO05D000309 2.0e-06 56.6 104 32.7
Nitab4.5_0000463g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.0e-06 56.6 70 40.0
Nitab4.5_0008808g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.0e-06 56.6 70 40.0
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 2.6e-06 56.2 74 40.5
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 4.5e-06 55.5 85 37.6
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 4.5e-06 55.5 85 37.6
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 5.9e-06 55.1 141 31.9
Nitab4.5_0003547g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.9e-06 55.1 64 40.6
Hma1.2p1_0512F.1_g169330 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.7e-06 54.7 71 38.0


User provided reference genes

Program Settings