Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.7e-81 305.8 142 100.0
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.4e-46 189.9 118 73.7
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.9e-46 188.3 119 73.1
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.3e-45 185.3 114 77.2
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.4e-43 179.1 114 74.6
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 5.9e-42 174.5 119 69.7
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 1.9e-40 169.5 120 68.3
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 1.6e-39 166.4 116 65.5
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.9e-39 164.1 116 65.5
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.0e-38 163.7 119 63.0
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.3e-38 162.5 115 65.2
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.0e-38 162.2 116 64.7
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.7e-38 161.0 120 65.0
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 1.7e-36 156.4 114 63.2
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.1e-35 152.1 113 62.8
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 4.1e-35 151.8 105 67.6
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.0e-35 151.0 94 76.6
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.1e-35 150.6 117 63.2
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-34 150.2 116 62.9
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-34 150.2 117 62.4
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 1.6e-34 149.8 112 61.6
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 4.5e-34 148.3 114 62.3
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.9e-34 147.9 113 61.1
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-32 143.7 114 62.3
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 1.4e-30 136.7 114 55.3
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-28 130.2 80 77.5
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.7e-28 129.8 111 54.1
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.9e-25 119.0 116 49.1
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.5e-25 117.9 119 44.5
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-25 117.5 110 52.7
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.9e-24 116.3 116 48.3
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.2e-24 114.4 67 77.6
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.4e-24 114.0 82 62.2
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.2e-23 113.6 113 46.9
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 3.6e-23 112.1 91 58.2
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 5.2e-22 108.2 114 43.9
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.5e-21 106.7 111 47.7
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 3.7e-20 102.1 113 39.8
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 2.4e-19 99.4 115 46.1
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 7.0e-19 97.8 111 48.6
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 1.6e-18 96.7 113 46.9
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 2.0e-18 96.3 113 41.6
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.5e-18 95.1 113 43.4
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 1.3e-17 93.6 114 39.5
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.7e-17 93.2 119 39.5
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.3e-17 92.8 52 82.7
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 3.8e-17 92.0 113 40.7
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 8.6e-17 90.9 118 40.7
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 8.6e-17 90.9 115 41.7
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.6e-17 90.9 107 42.1
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.9e-16 89.7 101 43.6
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 5.5e-16 88.2 115 36.5
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.2e-15 87.0 112 39.3
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.1e-15 84.7 79 54.4
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 1.8e-14 83.2 117 37.6
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 3.0e-14 82.4 68 57.4
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 6.8e-14 81.3 112 39.3
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.4e-13 79.0 115 35.7
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 4.4e-13 78.6 120 35.0
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 4.4e-13 78.6 111 32.4
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 1.1e-11 73.9 58 53.4
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.8e-11 73.2 114 34.2
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 1.8e-11 73.2 113 34.5
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.4e-11 72.8 45 68.9
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 3.1e-11 72.4 143 31.5
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 5.4e-11 71.6 86 43.0
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.0e-11 71.2 111 33.3
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 1.0e-09 67.4 98 31.6
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 4.3e-08 62.0 65 46.2
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.3e-08 62.0 84 36.9
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.6e-07 60.1 113 30.1
Cfa012186 Carpinus fangiana HOM05D001713 ORTHO05D001669 2.1e-07 59.7 118 31.4
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 2.8e-07 59.3 65 43.1
Haze_08774 Corylus avellana HOM05D001713 ORTHO05D001669 4.7e-07 58.5 124 34.7
Cfa012233 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.0e-06 57.4 141 32.6
QL02p074932 Quercus lobata HOM05D001713 ORTHO05D001669 1.4e-06 57.0 117 34.2
Haze_08779 Corylus avellana HOM05D000141 ORTHO05D001860 1.8e-06 56.6 130 30.8
QL02p074896 Quercus lobata HOM05D001713 ORTHO05D001669 1.8e-06 56.6 119 31.1
QL02p075014 Quercus lobata HOM05D001713 ORTHO05D001669 1.8e-06 56.6 119 31.1
Carub.0002s2549 Capsella rubella HOM05D001713 ORTHO05D001669 2.3e-06 56.2 138 29.7
Duzib268G1296 Durio zibethinus HOM05D001713 ORTHO05D001669 5.2e-06 55.1 119 31.1
Gohir.A09G192201 Gossypium hirsutum HOM05D001713 ORTHO05D001669 5.2e-06 55.1 117 29.1
Gohir.D09G186450 Gossypium hirsutum HOM05D001713 ORTHO05D001669 5.2e-06 55.1 117 29.1
Gorai.006G209200 Gossypium raimondii HOM05D001713 ORTHO05D001669 5.2e-06 55.1 117 29.1


User provided reference genes

Program Settings