Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043188 Solanum tuberosum HOM05D000083 ORTHO05D012214 3.3e-65 251.5 124 100.0
PGSC0003DMG400026096 Solanum tuberosum HOM05D000083 ORTHO05D000196 8.2e-40 167.2 110 79.1
PGSC0003DMG400003253 Solanum tuberosum HOM05D000083 ORTHO05D012214 2.0e-38 162.5 103 78.6
Solyc06g065790.1 Solanum lycopersicum HOM05D000083 ORTHO05D000196 2.2e-37 159.1 110 75.5
Sopen06g024620 Solanum pennellii HOM05D000083 ORTHO05D000196 6.5e-37 157.5 110 74.5
PGSC0003DMG400020457 Solanum tuberosum HOM05D000083 ORTHO05D000196 1.6e-35 152.9 110 75.5
Sopen00g012910 Solanum pennellii HOM05D000083 ORTHO05D000196 5.0e-29 131.3 110 62.7
Sopen06g021830 Solanum pennellii HOM05D000083 ORTHO05D000196 5.0e-29 131.3 110 62.7
PGSC0003DMG400020469 Solanum tuberosum HOM05D000083 ORTHO05D000196 4.2e-28 128.3 111 63.1
PGSC0003DMG400020454 Solanum tuberosum HOM05D000083 ORTHO05D000196 2.1e-27 125.9 111 62.2
Solyc12g017770.1 Solanum lycopersicum HOM05D000083 ORTHO05D012214 3.6e-27 125.2 96 70.8
Solyc06g066130.1 Solanum lycopersicum HOM05D000083 ORTHO05D012214 7.5e-25 117.5 90 70.0
PGSC0003DMG400020459 Solanum tuberosum HOM05D000083 ORTHO05D000196 4.8e-24 114.8 90 70.0
Nitab4.5_0000109g0140 Nicotiana tabacum HOM05D000083 ORTHO05D000196 1.9e-20 102.8 113 54.9
Nitab4.5_0000506g0140 Nicotiana tabacum HOM05D000083 ORTHO05D000196 5.5e-20 101.3 110 50.9
Nitab4.5_0014845g0020 Nicotiana tabacum HOM05D000083 ORTHO05D000196 7.2e-20 100.9 113 54.9
Nitab4.5_0000109g0110 Nicotiana tabacum HOM05D000083 ORTHO05D000196 9.4e-20 100.5 110 51.8
PGSC0003DMG400026090 Solanum tuberosum HOM05D000083 ORTHO05D000196 1.8e-18 96.3 109 47.7
PGSC0003DMG400026123 Solanum tuberosum HOM05D000083 ORTHO05D000196 1.8e-18 96.3 109 47.7
Nitab4.5_0005761g0020 Nicotiana tabacum HOM05D000083 ORTHO05D000196 4.0e-18 95.1 109 55.0
Nitab4.5_0009549g0010 Nicotiana tabacum HOM05D000083 ORTHO05D000196 4.0e-18 95.1 108 52.8
Nitab4.5_0010289g0020 Nicotiana tabacum HOM05D000083 ORTHO05D000196 4.0e-18 95.1 106 55.7
Sopen06g024000 Solanum pennellii HOM05D000083 ORTHO05D000196 9.8e-17 90.5 109 45.9
Sopen06g024180 Solanum pennellii HOM05D000083 ORTHO05D000196 1.7e-16 89.7 109 45.9
PGSC0003DMG400040146 Solanum tuberosum HOM05D000083 ORTHO05D000196 1.7e-16 89.7 105 43.8
Solyc06g065660.1 Solanum lycopersicum HOM05D000083 ORTHO05D000196 2.2e-16 89.4 109 45.9
Nitab4.5_0000667g0030 Nicotiana tabacum HOM05D000083 ORTHO05D000196 2.8e-16 89.0 102 49.0
Solyc12g017710.1 Solanum lycopersicum HOM05D000083 ORTHO05D000196 1.8e-15 86.3 69 65.2
Peaxi162Scf00075g00192 Petunia axillaris HOM05D000083 ORTHO05D000196 3.1e-15 85.5 104 47.1
PGSC0003DMG400040224 Solanum tuberosum HOM05D000083 ORTHO05D000196 4.1e-15 85.1 105 42.9
Peaxi162Scf00268g00117 Petunia axillaris HOM05D000083 ORTHO05D000196 2.0e-14 82.8 112 45.5
Sopen02g015040 Solanum pennellii HOM05D000083 ORTHO05D000196 4.5e-14 81.6 105 42.9
Solyc02g064870.1 Solanum lycopersicum HOM05D000083 ORTHO05D000196 1.3e-13 80.1 105 41.0
Peaxi162Scf00185g01626 Petunia axillaris HOM05D000083 ORTHO05D000196 1.7e-13 79.7 111 44.1
Solyc02g064930.1 Solanum lycopersicum HOM05D000083 ORTHO05D000196 2.9e-13 79.0 105 41.9
Sopen02g015020 Solanum pennellii HOM05D000083 ORTHO05D000196 5.0e-13 78.2 105 40.0
Sopen02g014990 Solanum pennellii HOM05D000083 ORTHO05D000196 1.1e-12 77.0 105 40.0
PGSC0003DMG400038504 Solanum tuberosum HOM05D000083 ORTHO05D000196 1.2e-11 73.6 105 38.1
Peaxi162Scf01096g00312 Petunia axillaris HOM05D000083 ORTHO05D000196 2.1e-11 72.8 74 50.0
Nitab4.5_0001165g0120 Nicotiana tabacum HOM05D000083 ORTHO05D000196 1.4e-10 70.1 99 47.5
Nitab4.5_0007219g0010 Nicotiana tabacum HOM05D000083 ORTHO05D000196 4.0e-10 68.6 85 40.0
Nitab4.5_0012726g0010 Nicotiana tabacum HOM05D000083 ORTHO05D000196 4.0e-10 68.6 92 39.1
Peaxi162Scf08257g00001 Petunia axillaris HOM05D000083 ORTHO05D000196 4.0e-10 68.6 84 41.7
PGSC0003DMG400008806 Solanum tuberosum HOM05D000083 ORTHO05D012214 5.2e-10 68.2 67 50.7
Nitab4.5_0000109g0210 Nicotiana tabacum HOM05D000083 ORTHO05D012214 8.8e-10 67.4 92 44.6
Nitab4.5_0000109g0220 Nicotiana tabacum HOM05D000083 ORTHO05D000196 2.0e-09 66.2 54 61.1
Peaxi162Scf36339g00001 Petunia axillaris HOM05D000083 ORTHO05D012214 2.6e-09 65.9 66 48.5
Peaxi162Scf66869g00002 Petunia axillaris HOM05D000083 ORTHO05D012214 2.6e-09 65.9 66 48.5
Nitab4.5_0000714g0130 Nicotiana tabacum HOM05D000083 ORTHO05D000196 3.4e-09 65.5 90 38.9
Nitab4.5_0012388g0010 Nicotiana tabacum HOM05D000083 ORTHO05D000196 3.4e-09 65.5 97 35.1
Nitab4.5_0013414g0010 Nicotiana tabacum HOM05D000083 ORTHO05D012214 7.5e-09 64.3 94 36.2
PGSC0003DMG400029932 Solanum tuberosum HOM05D000083 ORTHO05D012214 1.7e-08 63.2 85 35.3
Sopen06g012000 Solanum pennellii HOM05D000083 ORTHO05D000196 2.2e-08 62.8 85 37.6
PGSC0003DMG400017082 Solanum tuberosum HOM05D000083 ORTHO05D000196 2.2e-08 62.8 85 35.3
PGSC0003DMG400017083 Solanum tuberosum HOM05D000083 ORTHO05D000196 2.2e-08 62.8 85 35.3
PGSC0003DMG400041375 Solanum tuberosum HOM05D000083 ORTHO05D012214 3.7e-08 62.0 61 49.2
Peaxi162Scf00045g00413 Petunia axillaris HOM05D000083 ORTHO05D000196 8.3e-08 60.8 72 41.7
Peaxi162Scf00045g00422 Petunia axillaris HOM05D000083 ORTHO05D000196 8.3e-08 60.8 85 37.6
Nitab4.5_0005375g0020 Nicotiana tabacum HOM05D000083 ORTHO05D000196 1.1e-07 60.5 85 36.5
TAR487G0002 Trochodendron aralioides HOM05D000083 ORTHO05D000196 2.4e-07 59.3 90 35.6
Nitab4.5_0001520g0020 Nicotiana tabacum HOM05D000083 ORTHO05D000196 5.4e-07 58.2 92 33.7
Solyc02g064920.1 Solanum lycopersicum HOM05D000083 ORTHO05D000196 5.4e-07 58.2 85 38.8
A10p05700 Brassica napus HOM05D000083 ORTHO05D000196 7.0e-07 57.8 73 42.5
BraA10t42832Z Brassica rapa HOM05D000083 ORTHO05D000196 7.0e-07 57.8 73 42.5
HanXRQChr01g0011741 Helianthus annuus HOM05D000083 ORTHO05D000196 9.2e-07 57.4 82 39.0
Nitab4.5_0003519g0060 Nicotiana tabacum HOM05D000083 ORTHO05D000196 1.6e-06 56.6 68 45.6
Nitab4.5_0000013g0330 Nicotiana tabacum HOM05D000083 ORTHO05D000196 2.0e-06 56.2 85 35.3
Oeu031963.1 Olea europaea HOM05D000083 ORTHO05D000196 2.0e-06 56.2 67 46.3
Nitab4.5_0000604g0140 Nicotiana tabacum HOM05D000083 ORTHO05D000196 3.5e-06 55.5 67 44.8
Nitab4.5_0002263g0060 Nicotiana tabacum HOM05D000083 ORTHO05D000196 3.5e-06 55.5 67 44.8
Nitab4.5_0003519g0070 Nicotiana tabacum HOM05D000083 ORTHO05D000196 4.5e-06 55.1 68 44.1
Phvul.008G259700 Phaseolus vulgaris HOM05D000083 ORTHO05D000196 4.5e-06 55.1 70 45.7
Lsat_1_v5_gn_5_172860 Lactuca sativa HOM05D000083 ORTHO05D000196 5.9e-06 54.7 84 35.7
Lj5C309T10 Lonicera japonica HOM05D000083 ORTHO05D000196 5.9e-06 54.7 66 36.4
Nitab4.5_0006059g0050 Nicotiana tabacum HOM05D000021 ORTHO05D000010 5.9e-06 54.7 61 45.9
C05p05230 Brassica napus HOM05D000083 ORTHO05D000196 7.7e-06 54.3 73 41.1
ECA232G4789 Erigeron canadensis HOM05D000083 ORTHO05D000196 7.7e-06 54.3 68 45.6
Manes.13G123400 Manihot esculenta HOM05D000083 ORTHO05D000196 7.7e-06 54.3 93 35.5
Prupe.6G054400 Prunus persica HOM05D000083 ORTHO05D000196 7.7e-06 54.3 74 41.9


User provided reference genes

Program Settings