Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 1.6e-61 239.2 117 100.0
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 5.5e-54 214.2 120 90.0
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 2.8e-29 132.1 151 55.6
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 6.4e-26 120.9 87 71.3
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 8.3e-26 120.6 81 72.8
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 1.1e-25 120.2 96 65.6
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 1.9e-25 119.4 82 70.7
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 1.9e-25 119.4 144 49.3
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 2.4e-25 119.0 81 71.6
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 2.4e-25 119.0 83 69.9
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 3.2e-25 118.6 81 72.8
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 3.2e-25 118.6 81 72.8
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 5.4e-25 117.9 81 70.4
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 5.4e-25 117.9 81 70.4
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 7.0e-25 117.5 82 70.7
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 7.0e-25 117.5 89 65.2
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 9.2e-25 117.1 86 68.6
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 1.2e-24 116.7 82 70.7
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 1.6e-24 116.3 83 71.1
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 1.6e-24 116.3 81 71.6
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 2.0e-24 115.9 81 70.4
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 3.5e-24 115.2 83 71.1
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 4.6e-24 114.8 82 69.5
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 4.6e-24 114.8 85 68.2
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 4.6e-24 114.8 92 66.3
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 4.6e-24 114.8 81 67.9
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 4.6e-24 114.8 81 70.4
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 6.0e-24 114.4 81 70.4
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 6.0e-24 114.4 81 70.4
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 6.0e-24 114.4 113 54.9
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 6.0e-24 114.4 82 70.7
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 6.0e-24 114.4 81 70.4
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 7.8e-24 114.0 81 70.4
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 7.8e-24 114.0 81 70.4
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 7.8e-24 114.0 81 70.4
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 1.0e-23 113.6 82 68.3
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 1.3e-23 113.2 83 69.9
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 1.7e-23 112.8 83 69.9
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 2.3e-23 112.5 84 66.7
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 2.3e-23 112.5 81 64.2
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.3e-23 112.5 82 68.3
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 3.0e-23 112.1 128 51.6
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 3.0e-23 112.1 82 68.3
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 3.0e-23 112.1 81 65.4
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 3.0e-23 112.1 80 68.8
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 3.0e-23 112.1 81 69.1
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 3.0e-23 112.1 81 67.9
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 3.9e-23 111.7 92 63.0
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 5.0e-23 111.3 86 62.8
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 5.0e-23 111.3 81 69.1
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 5.0e-23 111.3 143 48.3
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 5.0e-23 111.3 81 69.1
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 5.0e-23 111.3 81 65.4
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 6.6e-23 110.9 82 67.1
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 6.6e-23 110.9 87 63.2
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 6.6e-23 110.9 81 66.7
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 8.6e-23 110.5 81 67.9
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 8.6e-23 110.5 82 65.9
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 8.6e-23 110.5 81 66.7
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 1.5e-22 109.8 81 67.9
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 1.5e-22 109.8 98 59.2
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 1.5e-22 109.8 83 68.7
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.5e-22 109.8 147 48.3
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 2.5e-22 109.0 82 65.9
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 3.3e-22 108.6 81 66.7
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 3.3e-22 108.6 81 66.7
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 3.3e-22 108.6 121 53.7
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 3.3e-22 108.6 80 62.5
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 4.3e-22 108.2 83 65.1
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 4.3e-22 108.2 83 65.1
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 4.3e-22 108.2 81 67.9
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 5.6e-22 107.8 81 66.7
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 5.6e-22 107.8 81 66.7
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 5.6e-22 107.8 81 65.4
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 7.3e-22 107.5 80 63.8
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 9.5e-22 107.1 81 65.4
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 1.2e-21 106.7 81 65.4
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 1.2e-21 106.7 81 66.7
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 1.6e-21 106.3 81 66.7
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 1.6e-21 106.3 82 63.4
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.6e-21 106.3 89 62.9
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 2.8e-21 105.5 82 64.6
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 3.6e-21 105.1 81 65.4
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 3.6e-21 105.1 82 67.1
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 4.7e-21 104.8 81 65.4
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 6.2e-21 104.4 80 65.0
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 6.2e-21 104.4 80 65.0
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 6.2e-21 104.4 80 65.0
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 6.2e-21 104.4 80 65.0
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 6.2e-21 104.4 80 67.5
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 8.0e-21 104.0 82 64.6
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 1.1e-20 103.6 89 57.3
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 1.1e-20 103.6 81 64.2
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 1.1e-20 103.6 81 64.2
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 1.8e-20 102.8 81 64.2
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 1.8e-20 102.8 81 63.0
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 4.0e-20 101.7 93 60.2
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 5.2e-20 101.3 81 63.0
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 8.9e-20 100.5 91 53.8
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 4.4e-19 98.2 81 61.7
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 2.9e-18 95.5 81 55.6
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 3.7e-18 95.1 90 52.2
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 4.3e-14 81.6 81 49.4
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 4.7e-13 78.2 59 66.1
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 1.5e-11 73.2 92 41.3
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 9.9e-11 70.5 84 45.2
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 8.3e-10 67.4 84 40.5
Aqoxy7G03081 Aquilegia oxysepala HOM05D007223 ORTHO05D008932 1.2e-08 63.5 48 60.4
CBR_g19697 Chara braunii HOM05D000117 ORTHO05D008932 5.1e-07 58.2 91 33.0
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 1.1e-06 57.0 74 44.6
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 1.5e-06 56.6 74 44.6
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 4.3e-06 55.1 94 34.0


User provided reference genes

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