Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043076 Solanum tuberosum HOM05D027396 ORTHO05D000016 1.1e-101 373.2 186 100.0
Sopen06g004850 Solanum pennellii HOM05D000014 ORTHO05D000016 5.9e-34 148.3 152 53.3
Sopen10g008740 Solanum pennellii HOM05D000014 ORTHO05D000093 6.1e-31 138.3 135 53.3
Sopen12g010070 Solanum pennellii HOM05D003150 ORTHO05D003532 1.1e-27 127.5 130 56.9
ClCG05G013100 Citrullus lanatus HOM05D000014 ORTHO05D000093 8.0e-15 84.7 117 38.5
PGSC0003DMG400043679 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-14 84.0 44 84.1
Sopen05g013910 Solanum pennellii HOM05D000006 ORTHO05D000001 2.3e-14 83.2 137 43.8
PGSC0003DMG400034514 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.3e-14 83.2 42 85.7
ClCG07G006040 Citrullus lanatus HOM05D000014 ORTHO05D000016 9.8e-13 77.8 117 37.6
PGSC0003DMG400042974 Solanum tuberosum HOM05D027396 ORTHO05D018135 9.2e-11 71.2 159 35.2
PGSC0003DMG400001011 Solanum tuberosum HOM05D027396 ORTHO05D398368 2.0e-10 70.1 66 60.6
PGSC0003DMG400038112 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.7e-10 69.7 63 63.5
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 4.6e-10 68.9 101 37.6
PGSC0003DMG400034543 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.6e-10 68.9 42 64.3
PGSC0003DMG400039434 Solanum tuberosum HOM05D000303 ORTHO05D000977 1.0e-09 67.8 139 33.1
PGSC0003DMG400047317 Solanum tuberosum HOM05D016896 ORTHO05D018135 1.3e-09 67.4 44 61.4
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-09 67.0 86 40.7
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 2.3e-09 66.6 86 40.7
Atru.chr2.557 Acer truncatum HOM05D000014 ORTHO05D000016 3.0e-09 66.2 123 31.7
PGSC0003DMG400042778 Solanum tuberosum HOM05D000303 ORTHO05D000977 3.0e-09 66.2 128 32.0
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 6.6e-09 65.1 85 40.0
ClCG02G010720 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.5e-08 63.9 146 31.5
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 4.3e-08 62.4 178 27.5
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 4.3e-08 62.4 85 40.0
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 7.3e-08 61.6 86 38.4
PGSC0003DMG400039310 Solanum tuberosum HOM05D000303 ORTHO05D000570 7.3e-08 61.6 84 38.1
Oeu021836.2 Olea europaea HOM05D000014 ORTHO05D000016 9.5e-08 61.2 112 33.9
Sopen02g005960 Solanum pennellii HOM05D000303 ORTHO05D000570 9.5e-08 61.2 117 32.5
Sopen09g020520 Solanum pennellii HOM05D000014 ORTHO05D000093 9.5e-08 61.2 106 43.4
PGSC0003DMG400043735 Solanum tuberosum HOM05D000303 ORTHO05D000977 9.5e-08 61.2 115 32.2
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-07 60.5 85 38.8
CANSAT80G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-07 60.5 127 34.6
CANSAT25G3548 Cannabis sativa HOM05D000014 ORTHO05D000016 2.1e-07 60.1 85 38.8
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-07 59.7 99 34.3
CANSAT21G1138 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-07 59.3 113 33.6
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-07 59.3 85 38.8
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 4.7e-07 58.9 68 41.2
PGSC0003DMG400036479 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-06 57.8 71 49.3
TWI15G0694 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.4e-06 57.4 85 38.8
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-06 57.0 58 44.8
Cpa.g.sc4.147 Carica papaya HOM05D000014 ORTHO05D000016 1.8e-06 57.0 112 33.0
Ca_16872_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.3e-06 56.6 68 42.6
PGSC0003DMG400041760 Solanum tuberosum HOM05D000303 ORTHO05D000977 2.3e-06 56.6 133 27.8
CANSAT54G2409 Cannabis sativa HOM05D000014 ORTHO05D000016 3.1e-06 56.2 91 34.1
Oeu048506.1 Olea europaea HOM05D000014 ORTHO05D000016 3.1e-06 56.2 88 35.2
PGSC0003DMG400045704 Solanum tuberosum HOM05D016896 ORTHO05D018135 3.1e-06 56.2 51 51.0
THA.LOC104803156 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.1e-06 56.2 81 40.7
THA.LOC104809177 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.1e-06 56.2 81 40.7
THA.LOC109116024 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.1e-06 56.2 81 40.7
THA.LOC109116178 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.1e-06 56.2 81 40.7
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 5.2e-06 55.5 85 37.6
CANSAT01G1712 Cannabis sativa HOM05D000014 ORTHO05D000016 5.2e-06 55.5 58 43.1
Oeu010813.1 Olea europaea HOM05D000014 ORTHO05D000016 6.8e-06 55.1 90 34.4
PGSC0003DMG400041331 Solanum tuberosum HOM05D000303 ORTHO05D000977 6.8e-06 55.1 149 28.2
arahy.Tifrunner.gnm1.ann1.2273GB Arachis hypogaea HOM05D000014 ORTHO05D000016 8.9e-06 54.7 91 36.3
arahy.Tifrunner.gnm1.ann1.TTVR4U Arachis hypogaea HOM05D000014 ORTHO05D000016 8.9e-06 54.7 91 36.3
PGSC0003DMG400039984 Solanum tuberosum HOM05D000303 ORTHO05D000977 8.9e-06 54.7 129 31.8


User provided reference genes

Program Settings