Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400042894 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.4e-96 356.3 178 100.0
Solyc02g062210.3 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.4e-56 222.6 177 63.3
Sopen02g012300 Solanum pennellii HOM05D010460 ORTHO05D010130 9.6e-50 200.7 166 60.8
Sopen00g013830 Solanum pennellii HOM05D008149 ORTHO05D010130 7.6e-47 191.0 141 66.0
PGSC0003DMG400036456 Solanum tuberosum HOM05D008149 ORTHO05D010130 6.9e-32 141.4 169 50.3
Solyc02g062060.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.5e-30 134.4 179 45.8
Sopen02g013020 Solanum pennellii HOM05D008149 ORTHO05D010130 5.5e-29 131.7 179 45.8
Solyc02g061870.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 7.9e-28 127.9 179 42.5
PGSC0003DMG400023889 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.9e-26 123.2 188 41.0
Solyc02g061910.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.3e-26 122.5 179 45.3
PGSC0003DMG400045200 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.1e-24 115.5 185 42.7
Sopen02g013040 Solanum pennellii HOM05D008149 ORTHO05D010130 6.9e-24 114.8 185 39.5
Solyc02g061900.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.0e-23 113.2 193 36.8
Sopen02g013030 Solanum pennellii HOM05D008149 ORTHO05D010130 2.6e-23 112.8 185 38.9
CAN.G158.3 Capsicum annuum HOM05D008149 ORTHO05D010130 3.8e-22 109.0 175 42.3
Sopen02g012890 Solanum pennellii HOM05D008149 ORTHO05D010130 6.5e-22 108.2 187 41.2
PGSC0003DMG400037967 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.5e-22 107.8 172 40.1
Sopen02g013010 Solanum pennellii HOM05D008149 ORTHO05D010130 1.4e-21 107.1 186 41.4
PGSC0003DMG400035879 Solanum tuberosum HOM05D008149 ORTHO05D010130 7.2e-21 104.8 193 39.9
PGSC0003DMG400023888 Solanum tuberosum HOM05D008149 ORTHO05D010130 7.9e-20 101.3 149 41.6
PGSC0003DMG400023892 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.0e-19 100.9 186 38.7
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 1.1e-16 90.9 171 34.5
Nitab4.5_0001019g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.4e-16 90.5 161 36.6
Nitab4.5_0009705g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.3e-16 88.6 143 38.5
Nitab4.5_0013476g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.4e-15 85.9 133 39.8
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 6.5e-14 81.6 152 36.8
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 6.5e-14 81.6 152 36.8
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 1.1e-13 80.9 150 35.3
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.1e-13 80.9 152 36.2
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 7.2e-13 78.2 171 31.6
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 1.2e-12 77.4 158 34.8
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 4.7e-12 75.5 158 36.7
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 8.0e-12 74.7 172 33.1
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 1.0e-11 74.3 151 34.4
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.4e-11 73.9 158 36.1
PGSC0003DMG400040065 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.8e-11 73.6 128 34.4
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.9e-11 72.4 158 33.5
Solyc02g062070.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.9e-11 72.4 91 46.2
Peaxi162Scf01324g00211 Petunia axillaris HOM05D017006 ORTHO05D010130 5.2e-11 72.0 150 34.7
Peaxi162Scf01324g00212 Petunia axillaris HOM05D017006 ORTHO05D010130 5.2e-11 72.0 150 34.7
Nitab4.5_0001907g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 6.7e-11 71.6 160 33.1
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 6.7e-11 71.6 182 30.8
Solyc02g062080.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.8e-11 71.2 187 34.2
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.1e-10 70.9 159 34.6
Peaxi162Scf01780g00003 Petunia axillaris HOM05D017006 ORTHO05D010130 2.0e-10 70.1 150 32.0
CAN.G569.40 Capsicum annuum HOM05D008149 ORTHO05D010130 4.4e-10 68.9 143 37.8
Peaxi162Scf00245g01014 Petunia axillaris HOM05D017006 ORTHO05D010130 9.7e-10 67.8 109 35.8
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 9.7e-10 67.8 147 32.0
PGSC0003DMG400007065 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.7e-09 67.0 143 30.1
Sopen10g029870 Solanum pennellii HOM05D008149 ORTHO05D010130 4.8e-09 65.5 144 32.6
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 6.3e-09 65.1 143 36.4
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 6.3e-09 65.1 148 34.5
Solyc07g062240.1 Solanum lycopersicum HOM05D007636 ORTHO05D000952 1.4e-08 63.9 176 29.0
Sopen07g030510 Solanum pennellii HOM05D002099 ORTHO05D002080 1.8e-08 63.5 138 29.0
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.8e-08 63.5 147 30.6
Solyc02g062090.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 4.1e-08 62.4 76 47.4
Gohir.D01G007450 Gossypium hirsutum HOM05D000010 ORTHO05D048137 5.3e-08 62.0 167 28.7
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 2.0e-07 60.1 147 32.0
Gohir.A01G007350 Gossypium hirsutum HOM05D000010 ORTHO05D217091 2.6e-07 59.7 176 29.0
Gorai.002G008500 Gossypium raimondii HOM05D000010 ORTHO05D048137 4.5e-07 58.9 179 29.6
SGA_v2.0_scaffold40G15410 Striga asiatica HOM05D007636 ORTHO05D003796 4.5e-07 58.9 158 33.5
FAN05G2840 Fragaria x ananassa HOM05D003655 ORTHO05D004065 2.2e-06 56.6 127 29.9
Thecc.10G133400 Theobroma cacao HOM05D002630 ORTHO05D000952 2.9e-06 56.2 153 30.1
FAN14G4734 Fragaria x ananassa HOM05D008426 ORTHO05D000952 5.0e-06 55.5 95 33.7
PGSC0003DMG400008179 Solanum tuberosum HOM05D008149 ORTHO05D010130 6.5e-06 55.1 126 36.5


User provided reference genes

Program Settings