Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400042655 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.2e-66 255.4 121 100.0
PGSC0003DMG400043134 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.0e-44 180.6 103 85.4
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 6.8e-39 164.1 108 74.1
Sopen10g015150 Solanum pennellii HOM05D003426 ORTHO05D003816 1.2e-38 163.3 104 79.8
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.4e-38 161.4 108 73.1
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.8e-37 158.7 103 75.7
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.6e-35 152.9 108 69.4
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.1e-32 142.5 104 69.2
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.1e-32 142.5 105 73.3
PGSC0003DMG400038550 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.1e-32 142.5 105 73.3
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.6e-18 94.4 88 58.0
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.1e-17 93.6 88 56.8
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 4.3e-17 91.7 107 45.8
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.2e-16 90.1 88 53.4
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.6e-16 89.7 94 52.1
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.6e-16 89.7 88 56.8
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.8e-16 89.0 88 56.8
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.3e-15 85.9 93 50.5
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 4.0e-15 85.1 107 43.9
PGSC0003DMG400044972 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.2e-14 83.6 79 54.4
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 9.8e-14 80.5 93 47.3
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 9.8e-14 80.5 93 47.3
PGSC0003DMG400041455 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.7e-13 79.7 103 45.6
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.2e-13 79.3 100 45.0
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 4.9e-13 78.2 89 49.4
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 6.4e-13 77.8 94 48.9
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 3.2e-12 75.5 94 50.0
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 9.2e-12 73.9 85 42.4
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 1.2e-11 73.6 95 45.3
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.6e-11 73.2 96 47.9
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 2.1e-11 72.8 85 47.1
Solyc10g045030.1 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.7e-11 72.4 46 82.6
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.3e-10 70.1 127 40.9
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.3e-09 65.5 85 44.7
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 5.6e-09 64.7 81 43.2
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 5.6e-09 64.7 87 43.7
Solyc10g044984.1 Solanum lycopersicum HOM05D003426 ORTHO05D003816 7.3e-09 64.3 43 72.1
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.6e-08 63.2 50 56.0
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 2.1e-08 62.8 76 43.4
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.8e-08 62.4 95 43.2
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.6e-08 62.0 79 40.5
PGSC0003DMG400034786 Solanum tuberosum HOM05D003426 ORTHO05D003816 4.7e-08 61.6 53 56.6
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 1.1e-07 60.5 86 38.4
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 2.3e-07 59.3 76 42.1
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 3.1e-07 58.9 85 40.0
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 5.2e-07 58.2 85 41.2
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 6.8e-07 57.8 111 35.1
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 3.4e-06 55.5 77 42.9
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 3.4e-06 55.5 86 38.4
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.4e-06 55.1 66 39.4
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 4.4e-06 55.1 111 34.2
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 4.4e-06 55.1 111 34.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 7.6e-06 54.3 95 35.8
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 7.6e-06 54.3 63 47.6
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 7.6e-06 54.3 73 43.8
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 9.9e-06 53.9 86 38.4
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 9.9e-06 53.9 65 46.2


User provided reference genes

Program Settings